mRNA_H-elongata_contig15258.3472.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15258.3472.1
Unique NamemRNA_H-elongata_contig15258.3472.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE)

HSP 1 Score: 687 bits (1773), Expect = 1.910e-234
Identity = 347/566 (61.31%), Postives = 442/566 (78.09%), Query Frame = 1
Query:    1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQAQVVALKSKGERDDQTP--NSSPTRRGMWNVAPPVAYSKIEDTSSKPKLD 1689
            S W+TRVW+A+YWTTFLLAWV++PILYQ+W  GELTW ER+R AVR+NI+QYL MA++LV+FVVYLV SG+ +AG V GFLMALANTYGL+FIILLLG GL+QVPR+LWETSFNE ELQR YF AT+VDTD  D++F+LE  E ++D ME++M+ ++     DR  +  +L++ R T+ AF+ E DDG  +       + +++ +D RTP +A +DLG+  L+PRDAA+LHS LRAAQV VVA + KWA L++ TD L C+++ EIPWG+AV ET P ++V  +L+ VL+R  NR+ W+W+AY+R L C+ LA+LCA LS  I+WSEV+ ASRWNLSPFGILL  M++QEAGI HALSMQAAVLVPFLYMSLC YRSLFTLRIFG+F+LQGGHH+L GPLL NAQYLIRLQFPLGYNF+R+LRY  + S+ +P L LPAF  LM +M TVPVLGT F +YAP++L+VLC FT+YKGYAR LRLVGLEH DLVS+DDP GNAR++EGR L+ERGKRQAQV+A + +     Q+P  +S  T+        P  YSK++D  S P ++
Sbjct:   75 SLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVVYLVVSGQTSAGSVSGFLMALANTYGLLFIILLLGQGLIQVPRQLWETSFNETELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLSPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPEESVCHFLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVMAASRWNLSPFGILLRLMYQQEAGIGHALSMQAAVLVPFLYMSLCCYRSLFTLRIFGTFSLQGGHHTLPGPLLFNAQYLIRLQFPLGYNFMRMLRYYGTRSASVPALSLPAFQKLMNDMSTVPVLGTGFTVYAPLVLVVLCAFTYYKGYARVLRLVGLEHVDLVSMDDPGGNARVDEGRELVERGKRQAQVLAARRRDATVQQSPPSDSPSTKDEPGGYVAPSLYSKVDDGCSSPDVE 640          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA)

HSP 1 Score: 381 bits (978), Expect = 2.840e-117
Identity = 218/518 (42.08%), Postives = 320/518 (61.78%), Query Frame = 1
Query:    1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEEC-VLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQA 1548
            S W+   W+ +YW+TF+LAW+V+PI+  +W  GELTW++R+++A+R N+  Y+ MA+  +  V YL+  G      + GFLMA  NTYGL+ I+LL+GHGLV+VPR+LW TSF ER+LQ  YF AT++DT + DA++DLE+AE   + ++++  +     +  ++ ++   + AI+ T   F  ++      + + P A      N+  +P  A +     +    +   LHS LR  Q KVVA + +W  L+     L+ ++  ++P  ++V     G   ++     ++    R+ W W+ ++     R  AVLC VLSA ++WSEV  A+  +LSPFG ++     Q       L +QAA L+PFLYMSLC YRSLF LR+  S AL G H SL G L+ NAQYL+RLQFPLGYNFL +L Y+         LQ  AF+ LM+ M  VP+LGTDFNIYAP++++VLC+FT   GYAR LR+VG+EHEDL    D +G  R++EG++L+ERGKRQA
Sbjct:   37 SAWLGYAWYTVYWSTFVLAWLVMPIMNAAWAAGELTWRKRIKAAIRANVLTYIAMAVGGIAAVGYLLVRGIATKDTLSGFLMAWGNTYGLMLIVLLMGHGLVEVPRQLWITSFPERQLQLLYFRATQIDTSLYDAIYDLEDAEKEFEKIQRAHRSGGGDAMTREQAKMSLYIEAIQATRDKF--DLSAAGNGRTARPAA------NNIDSPLPAKKAKKKQLTPVGELVSLHSRLRNGQEKVVAGRQRWEDLMNQVALLELIVSKQLPRPQSV-TAGRGSNPLKRFATFVQLKSARALWFWRLHLEHRVLRLTAVLCFVLSAMVIWSEVALAAPVDLSPFGKII-----QSFEGKSPLLIQAAALIPFLYMSLCCYRSLFKLRLLSSLALNGPHQSLPGQLMFNAQYLVRLQFPLGYNFLTLLHYEKGM------LQHIAFNKLMSNMSVVPLLGTDFNIYAPLIMVVLCLFTACHGYARLLRMVGIEHEDLQCATDKEGQERMDEGKSLIERGKRQA 534          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.890e-85
Identity = 187/515 (36.31%), Postives = 288/515 (55.92%), Query Frame = 1
Query:    7 WITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSME-----AEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLER 1533
            WI +VW  +YW+TF+L W+V+PI++     G  T ++R+  A+R  +R      + LV F +YLV      AG   G LMAL NTYGL+F+++LLG+GLV+VPRKLW++SF ++EL+R YF ++ VD+D+ DAV  L + E  +  + + +       EE  L     +L   +  ++ T  +F    +D  L    +P        + T  P  +   L          A LH+ L+ AQ++V  +K +   ++   + ++ +    +P+   V +   G+     L      +     W W   +     R LA+L   L+   +WS+V   S + LSP+G      F+Q  G +   ++Q A+ VP  Y+S+C YRSLF  ++FG F+LQG H SL+GPLL+NAQYLIRLQFPL YNFL +LR  SS  +        AF  LM+ M  VP+LG  F++YAP++++VL  FT+++GYAR LRLVG  HEDL+S ++ +    +++GR+L  R
Sbjct:  128 WILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGA-EGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELAL-----ELDACMKILQDTRASFRHRPEDMTLGML-LPRTPFGVNSHPTSGPPPSLAHL----------AGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDV-KAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYGA-----FQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQT--------AFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQE--EMIQQGRSLARR 609          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.240e-82
Identity = 196/510 (38.43%), Postives = 271/510 (53.14%), Query Frame = 1
Query:    1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIG-ILAAIRKTETAFYDEIDDGLLRKASVPLAHENRK-PNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRAL 1524
            S W++  W  +YW+TF+LAWVV+PIL  +W  GELTW+ R+R+A+++N+  Y  MA   ++   YL+  G         F MA  NTYGL+ I+LL+GHG              + E  R   + T V                       S EA+E          +G  L AI++T  +F      G  R+++   + ++ K P   +   +      L+        KLHS LR  Q +V+A   +W  LV   DK+ C+   I     + E  P      YL+    R+      +W  Y      R LAV+C  LS  +VWSE   A  ++LSPFG L+     +      AL++QAAVLVPF+YMS C +RSLF L++FGSFAL G H SL   L++NAQYL+RLQFPLGYNF+ +L  +  A      LQ  AF+ LM+ M  VP+LGTDFNIYAP+L+++LC+FT  +GYAR LRLVG+EHEDL + D  DG A +    AL
Sbjct:  143 SAWVSHAWSTVYWSTFVLAWVVMPILNSAWHAGELTWRARIRAAIKINMLTYAAMAAAGLVATGYLLYKGVATRDTAQAFFMAWGNTYGLMLIVLLMGHG--------------DFERVRGGLVTTPV-----------------------SPEADEAPAKASINVEVGRYLEAIQETIDSFKLAAMGGDRRRSASSCSPDSSKGPKKEKDRGKRNHVSELI--------KLHSRLREGQERVMAAWQRWQDLV---DKVTCVEQII--SRTLPEPQPLPGASNYLRAQGSRVAR----VWLLYAHHHFLRLLAVICLALSVMVVWSECTLAVPYDLSPFGWLI-----EVLDPFGALAVQAAVLVPFIYMSFCTFRSLFKLKLFGSFALNGPHQSLPRQLIMNAQYLVRLQFPLGYNFVTLLGPEGGA------LQRIAFNKLMSNMAVVPLLGTDFNIYAPLLMVLLCLFTACRGYARLLRLVGIEHEDLHTAD-VDGQASMRRSNAL 586          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S4VB21_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB21_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.540e-71
Identity = 191/543 (35.17%), Postives = 294/543 (54.14%), Query Frame = 1
Query:   22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSG-KVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDD-GLLRKASVPLAHE--NRKPNDTRTPAEAFRDLGLVIL-----TPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGK-------TVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLERGKRQAQVVALKSKGERDDQTPN 1599
            W   YW+TFLLAW+V+PI  +S   GE T   R+++  R + R  L +   LVL VV ++  G  + +  V   LMAL NTYGL+ + LLLG+GLV +P++LW+ +F E EL+R   +A   D  + DAV++L++ ED ID   +++         DR    G L++    E  +   +DD  LLR ++  L+ +  +R+ N+ R  +EA  D  +        T      LH+ L+ AQ KV+  + +W  +V  +     L++      +  +++PG+       + +  +   L  +  +   +W+ ++R    R +A+  A LS  I+W E   A  +NLSPF + L  +     G       Q A L+P LYMS C Y SLF L  FG + L+G   S    LL NAQYL+RLQFPLGYN+L + +Y  S ++        AF  LM+ M TVPVLGT F++YAP+L+L LC FT   GY R + ++G+EHED + L D +  N ++ EG +LL + +R+A      +K   +D+TP+
Sbjct:  108 WQVTYWSTFLLAWLVLPITRESLLSGEFTAAARVKNGARKSARGILIL---LVLAVVAIIALGIYLRSLHVIPVLMALGNTYGLLLVSLLLGYGLVDLPKQLWKKTFPEDELRRARIMAVGADEALFDAVWELQDYEDLIDGAVEAI---------DR---CGELSSNLINEETYKQYVDDLVLLRNSTAELSPDLQSRRTNNRRRHSEAEDDDPVSTFDGARPTVDYLVHLHARLKLAQEKVIGAQQRWEVIVEQSRFYSNLVEG-----STPQSSPGQNGGEDQQSSLPLMNEQLVPLGTKVQGMWRKHLRNPTYRLMALSTAGLSILILWCEATLAVEYNLSPFNLFL-DLLDGPNGRQKGTLFQIAALIPLLYMSTCVYSSLFKLGTFGPYCLRGNRQSHGVALLFNAQYLVRLQFPLGYNYLLMTKYDISFTNC-------AFSQLMSHMDTVPVLGTSFSVYAPLLILALCGFTLCDGYPRLMAVLGVEHEDAILLSDKETLNGKVNEGISLLRKYERRAGSSRQSTKTN-NDRTPS 621          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S2XKF6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.030e-64
Identity = 178/557 (31.96%), Postives = 295/557 (52.96%), Query Frame = 1
Query:   22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSME---AEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRK--ASVPLAHE--NRKPNDTRTPA----EAFRDLGLVIL--------TPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLERGKRQAQVVALKSKGERDDQTPNSSPTRRGMWNV 1632
            W  +YW+TF LAW ++P++      G  T   RLR+  R  +R Y+F++++ ++ VV L  + ++ +  V   LMAL NTYGL+ + +LLG+GLV +PR +   +  E EL+R   +A   D  + DAV++L++ ED +D     +E   A++   PG         A   K E  +Y    + L+R+  A+  L  E  NR+ +  R       + F D+ +           T +  A+L+++L+ AQ  +++M+ +W  LV+ +     L        +  + +P  +++      +     RS W+ Q  +R    R +A+  A+LS  ++WSE       NLSPF + L         I      Q A L+P LYMS C Y SLF L  FG + L+G + S+   L+ NAQYL+RLQFPLGYN+L +L+Y +S+++        AF  +M++M TVP  GT F++YAP++++ LC FT   GY R L ++G+EHED + + D +    ++ EG  LL R + +++  + +S+ + DD + +S   +   W V
Sbjct:   79 WMYIYWSTFCLAWGILPLVRAVLLSGHFTALSRLRAGCRKALRGYIFLSMISLVAVVVL--AIRLQSFHVMSVLMALGNTYGLLMVAVLLGYGLVDLPRSISRMAKPENELRRARIMAGSADEALFDAVWELQDCEDLVDATIARIERYNAQDEESPGG--------ATASKGEQ-YYTVCVESLVRRRNATANLGSELQNRRTSSNRRSNNRGDDDFEDVHVHAPPYCADDRPTIQHLAELNAKLQRAQATLMSMEQRWNSLVKRSRFYASLAGGDVPDRSTSQASPSPSLLSGSNEGVGGCM-RSMWMRQ--LRGPVYRLMALSMAILSGTVLWSEATIGLDINLSPFALFLEAFGSSSKNIFF----QIAALIPLLYMSACVYSSLFKLSNFGPYCLRGHNQSIGVALVFNAQYLVRLQFPLGYNYLLMLKYDTSSTNC-------AFVHVMSDMSTVPFFGTSFSVYAPLMIIALCCFTLCNGYPRLLAVLGIEHEDAILMGDKETLEGKVNEGITLLRRHEDRSKDSSRRSEFK-DDSSHSSDSQKSDSWWV 609          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: K0R7D7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R7D7_THAOC)

HSP 1 Score: 225 bits (574), Expect = 5.610e-59
Identity = 179/552 (32.43%), Postives = 281/552 (50.91%), Query Frame = 1
Query:   22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGF----LMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHID-----CMEKSMEAEECVLPGDRPQLIGILAAIRKTE---------TAFYDEIDDGLLRK-ASVPLAHENR-KPNDTRTPAEAFRDLGLVIL---TPRDA--------AKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPW-GEAVFETAPGKTVVQYLKMVLKRIQNRSWW---------IWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLE-EGRALLERGKRQA 1548
            W   YWTTF LAW+++PI  QS   G+ T  +R++  V  +I+  + M +  V+ V+  V + K+    +       LMAL NTYGLV + LLLG+GLV +P++ W  +     L+R   IA+ ++  + ++V  LE+ ED I+      ++     +E ++  +  +L     + R T          T F+  ++  + RK  ++ L  E R + ND+ T                TP +           L S+L  AQ  V + + +W  L+ ++     L+D E+   G AV +   G       + +L    N             +W  Y+R+   R +A++ AVLS  ++ SEV   S+ NLSPF  L+  + + +   +H +  Q A LVP LYMSL  Y SLF  +IFGS++L+G   S    LL NAQYL+RLQFPLGYN+L +L+Y  S           AF  +M +M T+P LG  F++YAP+L+L +C+FT    Y R L+ +G+EHED + + D D  A+ E +G  L++R  + A
Sbjct:   89 WKVTYWTTFFLAWIILPITRQSLTSGQFTRYQRIKDGVSKSIKGIVLMMIAGVVTVI--VSAVKLRTWHIVTIVMPALMALGNTYGLVLVALLLGNGLVNIPKRFWREACPSSVLRRSRIIASHIEESLFESVMQLEDIEDKIEEVCAMAVQLDEGGDEGLMRNEDGELTLRGQSKRATRCSCCGVDEVTEFHGCLEVLVRRKNETINLCAERRTRRNDSPTRGHXXXXXXXXXXDGDTPEEVNTMDINYLLSLSSKLMDAQENVNSAQLRWDTLMEHSRLFSALMDGEVATTGGAVGDRGQGSDGSN--ENLLSPSSNHGSCGKVCYMLRRVWVRYLRFPTYRVVAMITAVLSVFVLMSEVTLGSKMNLSPFSWLVHGIEKTDQS-SHQIPFQIAALVPLLYMSLSLYSSLF--QIFGSYSLRGNRQSHGVALLFNAQYLVRLQFPLGYNYLLMLKYDLSHC---------AFGAIMDDMSTIPFLGASFSVYAPLLILAVCLFTLCDVYPRLLKFLGIEHEDALLVGDADELAQKENDGIQLMKRHSKSA 624          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S2WQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ09_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.990e-57
Identity = 177/547 (32.36%), Postives = 259/547 (47.35%), Query Frame = 1
Query:    1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYV---RWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHA----LSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQAQVVALKSKGERDDQTPNSSPTRRG 1620
            SR ++  W  +YW+TF LAW+V+P++Y++W  GE TW+ R  +A+R N++  +   ++  +FV+YLV +G V    +  F M   NTYGL+ ++ LLG+GLV+VPR LW  S     L+R  F A   DTD+ D   D+E+              +E  + G      G+     K   A   EI +  LR+ S    H  R      T  +      L         ++++  R A++   + +    KL    D+   L  E    E+  E +        L    K         +Q  +   R L  +        LS  IVWSE+      NLSP+ +LL  +         +    L  Q  VLVP+LYMS C + SLF LR+ G  +LQ  H S  G LL NA YLIRLQFPLGY +L +L   ++    +      AF  LM+ M T P+LG  F +Y P+LL++LC  ++   Y R L  VG+E E   +    DG  R++EGR LL R ++ A   A    G+  D+    +P R G
Sbjct:   95 SRLLSTSWSVVYWSTFCLAWLVLPVVYEAWYAGEPTWRGRFLAALRANLKYCIASTVLGFIFVLYLVATGNVTLEGIPSFFMLFGNTYGLLIVVALLGNGLVEVPRALWRQSTPSDRLERLLFCAAVCDTDVYDCKCDVEDI------------LKEATIAGAASSETGV-----KGTAAEVIEICEDTLRELSQEY-HIRRSTGRHDTLEDRSEGHLLAEQETPQQGRMYALHRRAKMACESCRAAKMKL----DRFFALAIE---HESRMEASEESDTASRLPRPSK---------YQMLIGGSRVLAAKGACFAAIALSTMIVWSELTCGLPVNLSPWSLLLGTIASSANDRPESQPLVLIHQLLVLVPYLYMSGCCFYSLFQLRLSGFLSLQSPHQSAPGALLFNAIYLIRLQFPLGYTYLTMLSPPNTHGDRLA--DDVAFQHLMSGMDTFPILGQQFVVYMPVLLVLLCASSYVNLYPRLLASVGIEQE---AYGFSDGEDRIQEGRQLLRRHRKHAMAAA----GDTSDEE-TRAPARHG 597          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: B8CB15_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB15_THAPS)

HSP 1 Score: 218 bits (554), Expect = 2.550e-56
Identity = 163/544 (29.96%), Postives = 264/544 (48.53%), Query Frame = 1
Query:   22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFM----ALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGI---------------------LAAIRKTE-TAFYDEIDDGLLRK-ASVPLAHENRKPNDTRTPAEAFRDLGLVI--LTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVL----------KRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLER 1533
            W   YWTTF+LAW+++PI  +S   G  + ++R +  V  +IR  + M     + ++   ++L     V    V   LMAL NTYGLV + +LLG+GLV +P++ W  +    EL+R   +A   + ++ +A+ +LE+ E+ I+  E    A      G   + +G+                     L   R  E T F++ +++ + RK  ++ L  + R      +      D G  +  L       L++ L+ AQ +V + + +W  L+ ++     L+D+    EA+  T+                        +IQ     +W  ++R+   R +A++ AVLSA ++ SEV  A   NLSPF   L       +   H +  Q A L+P LYMS+C Y  LF +    S+ L+G   S    L+ NAQYL+RLQFPLGYN+L +L+Y  +           AF  +M++M T+P  GT F++YAP+L+L +C FT    Y + L   G EHED + L D D   +++ EG  L++R
Sbjct:   95 WQITYWTTFILAWLILPITRESLLSGHFSLQQRFKDGVAKSIRGIMIMICMGTVTIIGMAIHLKSVRLVTT--VLPVLMALGNTYGLVLVAVLLGNGLVNIPKRFWREACPANELRRVRIMACGAEEELFEAIMNLEDVEERIE--EVCANAINLREDGGGGEAVGMMENEDGGISLRTRRGRARRCGLCCCRVDEVTQFHESLEELVRRKNETLELNSDRRTRRGNASSRNRDNDEGNAVHTLDLNYLVSLNAHLKRAQERVTSAQLRWNHLMDHSRLFASLMDDES-DEALTGTSXXXXXXXXXXXXXXXXXXXXXXNNKIQYTLQKLWVQHLRYHAYRIIAIVTAVLSAFVLLSEVTLAVPLNLSPFSWTL-HALDNSSDSTHQILFQIAALIPLLYMSICVYTCLFQMSSLSSYCLRGNRQSHGVALIFNAQYLVRLQFPLGYNYLLMLKYDMTHC---------AFSAIMSDMSTIPFFGTSFSVYAPLLILAVCGFTLCDAYPKILHFFGFEHEDALLLGDEDVLESKVNEGIQLMKR 623          
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S0TIF6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TIF6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.150e-55
Identity = 165/557 (29.62%), Postives = 271/557 (48.65%), Query Frame = 1
Query:   22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMA----LVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHID--C-----MEKSMEAEECVLPGDRPQL-IGILAAIRKTE-----------TAFYDEIDDGLLRK-ASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAK-------------LHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEA---------------VFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSL-DDPDGNARLEEGRALLER 1533
            W   YWTTFLLAW+++PI  ++   G  T  +R+R+    +I+  L M     + ++   ++L     V    V   LMAL NTYGLV + LLLG+GLV VP++ W  +    EL+R   IA  V+ ++ D++  LE+ ED I+  C     + +S +    ++  +   + +G   + R+             T F++ +++ + RK     L  E R      +                D A              L+++L+ AQ +V++ + +W +LV +   +  L+++   G                 +  ++   +    +K +L+R        W  ++R+   R +A+  AVLS  ++ SEV  AS  NLSPF   L     Q  G +  +  Q A L+P LYMS+C Y  LF + + G + L+G   S    L+ NAQYL+RLQFPLGYN+L +L+Y  S           AF  +M++M T+P  GT F++YAP+L+L++C  + +  Y + L  +G+EHED + L D  D   ++ EG  L+ R
Sbjct:  103 WKITYWTTFLLAWLILPITRETLLSGHFTLLQRIRNGFTKSIKAILLMNVCGFIAVIAMAIHLKSVHLVTI--VLPVLMALGNTYGLVLVSLLLGNGLVNVPKRFWREACPANELRRIRMIACGVEEELFDSIMALEDVEDKIEEVCATAVNLRESGDENVTMMENEEGGVSLGTTTSRRRRGCWSLCWKADQVTQFHECLEELVRRKNEGRELCSERRTRRGGNSGTXXXXXXXXXXXXXXDDAAETINTMDVKYLVTLNTQLKKAQERVISAELRWNELVDHNRIVSALMNDDDTGSVASGQDGNDGAYNSNLLSSSSSSSSGCHRVKYILQRF-------WMRHLRYHTYRFIALTTAVLSVFVLLSEVTLASSLNLSPFSWTL-AALDQWGGSSSQILFQLAALIPLLYMSICVYTCLFQMSLLGPYCLRGNRQSNGVALVRNAQYLVRLQFPLGYNYLLMLKYDMSNC---------AFSDIMSDMATIPFFGTSFSVYAPLLILLVCALSLFDCYPKMLHWLGIEHEDALLLGDQEDLECKVNEGIQLMTR 640          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP79_9PHAE1.910e-23461.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCR5_9STRA2.840e-11742.08LMBR1-like membrane protein n=1 Tax=Tribonema minu... [more]
W7TPT9_9STRA2.890e-8536.31LMBR1-like membrane protein n=3 Tax=Monodopsidacea... [more]
A0A835Z6T2_9STRA4.240e-8238.43LMBR1-like membrane protein-domain-containing prot... [more]
A0A7S4VB21_9STRA2.540e-7135.17Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
A0A7S2XKF6_9STRA1.030e-6431.96Hypothetical protein n=2 Tax=Attheya septentrional... [more]
K0R7D7_THAOC5.610e-5932.43Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2WQ09_9STRA1.990e-5732.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
B8CB15_THAPS2.550e-5629.96Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0TIF6_9STRA4.150e-5529.62Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15258contigH-elongata_contig15258:138..7532 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score680.6
Seed ortholog evalue6.1e-193
Seed eggNOG ortholog2880.D7FY43
Preferred nameLMBRD2
KEGG koko:K10393,ko:K16831
GOsGO:0001726,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0005886,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0008150,GO:0009605,GO:0009987,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016477,GO:0030030,GO:0031252,GO:0031268,GO:0031941,GO:0032991,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051234,GO:0051674,GO:0071840,GO:0071944,GO:0098657,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120036
EggNOG free text desc.LMBR1-like membrane protein
EggNOG OGsKOG2296@1,KOG2296@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Hectar predicted targeting categorysignal anchor
Exons11
Model size3004
Cds size1704
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15258.3472.1prot_H-elongata_contig15258.3472.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15258 1499..7532 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929901.72041-UTR-H-elongata_contig15258:137..14001622929901.72041-UTR-H-elongata_contig15258:137..1400Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15258 138..1400 -
1691679201.2547615-UTR-H-elongata_contig15258:137..14001691679201.2547615-UTR-H-elongata_contig15258:137..1400Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15258 138..1400 -
1622929901.7371514-UTR-H-elongata_contig15258:1462..14981622929901.7371514-UTR-H-elongata_contig15258:1462..1498Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15258 1463..1498 -
1691679201.272029-UTR-H-elongata_contig15258:1462..14981691679201.272029-UTR-H-elongata_contig15258:1462..1498Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15258 1463..1498 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929901.7576525-CDS-H-elongata_contig15258:1498..16301622929901.7576525-CDS-H-elongata_contig15258:1498..1630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 1499..1630 -
1691679201.282564-CDS-H-elongata_contig15258:1498..16301691679201.282564-CDS-H-elongata_contig15258:1498..1630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 1499..1630 -
1622929901.7759511-CDS-H-elongata_contig15258:2025..21751622929901.7759511-CDS-H-elongata_contig15258:2025..2175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 2026..2175 -
1691679201.2931995-CDS-H-elongata_contig15258:2025..21751691679201.2931995-CDS-H-elongata_contig15258:2025..2175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 2026..2175 -
1622929901.7994761-CDS-H-elongata_contig15258:2421..26761622929901.7994761-CDS-H-elongata_contig15258:2421..2676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 2422..2676 -
1691679201.3024442-CDS-H-elongata_contig15258:2421..26761691679201.3024442-CDS-H-elongata_contig15258:2421..2676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 2422..2676 -
1622929901.8164132-CDS-H-elongata_contig15258:4145..42351622929901.8164132-CDS-H-elongata_contig15258:4145..4235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4146..4235 -
1691679201.3112967-CDS-H-elongata_contig15258:4145..42351691679201.3112967-CDS-H-elongata_contig15258:4145..4235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4146..4235 -
1622929901.8359983-CDS-H-elongata_contig15258:4486..45851622929901.8359983-CDS-H-elongata_contig15258:4486..4585Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4487..4585 -
1691679201.3209705-CDS-H-elongata_contig15258:4486..45851691679201.3209705-CDS-H-elongata_contig15258:4486..4585Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4487..4585 -
1622929901.8600717-CDS-H-elongata_contig15258:4808..50151622929901.8600717-CDS-H-elongata_contig15258:4808..5015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4809..5015 -
1691679201.3303537-CDS-H-elongata_contig15258:4808..50151691679201.3303537-CDS-H-elongata_contig15258:4808..5015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 4809..5015 -
1622929901.873986-CDS-H-elongata_contig15258:5388..55651622929901.873986-CDS-H-elongata_contig15258:5388..5565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 5389..5565 -
1691679201.3482425-CDS-H-elongata_contig15258:5388..55651691679201.3482425-CDS-H-elongata_contig15258:5388..5565Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 5389..5565 -
1622929901.8895562-CDS-H-elongata_contig15258:6023..62361622929901.8895562-CDS-H-elongata_contig15258:6023..6236Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 6024..6236 -
1691679201.3623846-CDS-H-elongata_contig15258:6023..62361691679201.3623846-CDS-H-elongata_contig15258:6023..6236Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 6024..6236 -
1622929901.910556-CDS-H-elongata_contig15258:6870..70451622929901.910556-CDS-H-elongata_contig15258:6870..7045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 6871..7045 -
1691679201.384798-CDS-H-elongata_contig15258:6870..70451691679201.384798-CDS-H-elongata_contig15258:6870..7045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 6871..7045 -
1622929901.9298134-CDS-H-elongata_contig15258:7326..75321622929901.9298134-CDS-H-elongata_contig15258:7326..7532Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 7327..7532 -
1691679201.399884-CDS-H-elongata_contig15258:7326..75321691679201.399884-CDS-H-elongata_contig15258:7326..7532Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15258 7327..7532 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15258.3472.1

>prot_H-elongata_contig15258.3472.1 ID=prot_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=568bp
SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIR
QYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHG
LVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCME
KSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHE
NRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAK
LVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQ
AYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEA
GIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLL
INAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVP
VLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNA
RLEEGRALLERGKRQAQVVALKSKGERDDQTPNSSPTRRGMWNVAPPVAY
SKIEDTSSKPKLDIEDA*
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mRNA from alignment at H-elongata_contig15258:138..7532-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15258.3472.1 ID=mRNA_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7395bp|location=Sequence derived from alignment at H-elongata_contig15258:138..7532- (Himanthalia elongata Himel1 dioecious)
AGCCGTTGGATCACCCGAGTTTGGTTCGCACTATACTGGACCACGTTTCT GCTGGCATGGGTCGTCATCCCCATCTTGTACCAGTCGTGGCGGAGGGGAG AGCTCACCTGGAAAGAAAGGCTTAGGTCCGCGGTACGGATGAACATACGA CAGTATTTGTTCATGGCGCTGGTTCTCGTGCTGTTCGTGGTCTATCTCGT CGGAAGGTGACTCGGGTGTACCCGCGTTGGGGGTTTGGTCACCTCAAGAG TGTGTGCTCCTAGAAGTCTCAAGTGTATAGTTTGCATTCTAGTACTTAGT ATTATATTATGTATATTACGAGTATATATATATATATATATATTATGTAC CCCAGCTATGTGACAAATCCCGGATTTGCTATCCCAAGACTTCCACGTGT ATCCACTGTCATCCGACGCTTGTTGTGTTGCTTGTTTTTTCCTTGGCTGC TTGCTGTGTGCCGCGTGGATTTGTGGTCGTTCTACAGCGGGAAGGTAAAC GCTGGCAAGGTGGGAGGGTTTTTAATGGCCCTCGCGAACACGTATGGTCT CGTCTTCATCATCTTGCTCCTGGGGCACGGTCTGGTGCAGGTGCCTCGGA AGCTCTGGGAGACCAGCTTTAACGAAAGGGAGCTCCAGCGTCATTATTTC ATCGCGACGAAGGTGAACAAAATAGACGCATCGCTAACGAGAGCCTAGAG AGCGCGCAGCAACATGGTGATCCACTCTGCTTTTTTGTAGTGTAGGACTT TGCAAGACCTCGAGATGCTTGCCTCGAGCTTCTTCTTGTGATGGATACCA TGCGTACTACAAAAGAACACACCTTTCGTCACGAATCCACCCTCTAGTTA TTTCTACGAAGGCAGTGGTATTTTTTGCCGTTTGCTGCACATCGCAAAAT GTTGTTCGATCGCTGAAACGTCGTCGTTCTGTATATATAATCCCTCTCCC AGCACCGTGTTTCATCCGCATTATCTCAGGGTTAAGGCCGTTTTTAACAA TTTATTTTATTTTGAAATTATTTGAAATATCAACCTTTTTAACATACTAA ACGAGGTGTTTGTCACAATTTGGTGCCAAAAACTTGGAAAGCAATTCGCA GGCCAAAAGTGTGAGCGAGTTGCTTCCAATATCTATATCTATATCTATAT TTAAACATTTTGACGCAGTTTAACAAATGTTTTGTAAAAAAAATCGACAT TTTTTTTTAATGTTTAAAACGGCCCTTAGGGTAAGCTTCGAATCCTCTTC AAAAAACATGTCTCTATTTACTCTTCGCCCTGCATGCATCTCGAAGGTCG ATACGGATATGCAAGACGCGGTATTCGATCTCGAGGAAGCGGAGGATCAT ATCGATTGTATGGAGAAATCCATGGAGGCCGAAGAGTGCGTGCTTCCGGG CGACAGGCCGCAGCTAATCGGCATCCTAGCTGCTATCCGGAAAACGGAAA CCGCCTTTTACGACGAAATTGACGACGGTTTGCTCCGAAAGGCGAGCGTC CCATTGGCTGTTGTAGGTTGTAGCGATGGAGCATGTGCGTTTAAAATTGG ACCTAAACGTATCTTCTGTTATCGGTAAGCATGGAAAAATTGAGATGAAA GGAGTTTTTACTATAGATCCTCCTGAGGATCTCCCCCAAAGACCTTCGAG GAGGGTTTATACAGCAATGCGTCAGGCATGCCTTTTACAATCGTAACTGA GGTTGCACAAGTTCCCCAGTACGAAGGATGATTTATGCGTCAAGCGTGTC TGTGATAGTCGTAACTGAGACAGCGTATGTTCCCTGGTGCTAAGGATGAA GCGGGCGATCCATGAATCGCACGAGAGTTTTCTTTTTTTTATTGTAGTAC GCCTTACTTCGTTCGCCTTTTTGCGTCACAAGTTATGTTGAAACATGTCA AAAGAGTTCACTTTTTGTCAAAACGATATCTTTGACGTTCCATTCCCTTG TTTTTGCTATCTTGCAGCATGAAAACCGAAAGCCAAATGACACCAGGACG CCAGCGGAAGCTTTCCGAGACCTAGGGTTGGTCATCCTCACCCCTCGAGA CGCGGCCAAGCTGCACTCTGAATTGCGAGCGGCGCAGGTCAAGGTCGTGG CGATGAAGACAAAGTGGGCGAAGCTAGTACGAAACACGGACAAGGTCAGT TGGAGGTCCCAGTTTAACGTTGCGCGTGGACAAGGTCAGTTGGGGTGACT TATCGTTACCGATTTCAAGCAGGTACAGTGTGCGTCGTACTTTTTTTTTA CTCTTGTGTGCGCCGTGCCCGGAGCTGGTGGGCTTGTTCTGAAGATGGGC TTTTAAAATGATAAGTTTCTTGGGAGAATTGATTGTGTCTCATAATAACC AATAATAGTGCCCGCCTGTTTCATGGCATTCCATGTAATAGAAGGATCTC TGGCCGGTGCACTTCGGCTCGCTCCTATTGGAGTACAAAAACGTCTTCGC CCACGACTGCTTTCATTTGTCTTGTGTTGCTTCATTCTCTCGTTGAACTT TGGTGCCCCGGCTGCAGCTCCAGTGCCTGCTGGACGAAATTCCGTGGGGT GAAGCGGTTTTTGAAACGGCTCCAGGGAAGACGGTGGTCCAATACTTGAA GATGGTGCTCAAGCGAATCCAGAACCGCTCTTGGTGGATCTGGCAGGCGT ATGTTCGTTGGCTCTGCTGCAGGACGTTGGCAGTCCTGTGCGCCGTGTTG AGTGCAGCGATTGTGTGGAGCGAGGTGGGCTTGTTATCTTTGAAGGCGTG GTTAGAAGTGTATCAAAAATGGGCGATACCTTCCGCACTTAACGTTATAT GTTCTTCTTCAAAGGACCGGATTGATTACAGGAACACACTCACTTTCTCT CTTGTCCCTTAAAGCTTTAAATAATGGGTTGTGTTGCCTCCTATCATAGG TCCGTGCTTTGAAAGCGATCCCACTCATTTATATATGCCGATGCCAGGTG GTTGGAGCGAGTCGGTGGAACCTAAGCCCCTTCGGCATCCTCCTGTGGTT CATGTTCCGACAAGAAGCAGGCATCGCTCATGCCCTATCCATGCAGGTAT ATCATGCGTTGTCGATGCACCACGCGCAGTAGGCGACTACTGGGATTGCT TTGAAAATCAAAACGTTTAGCGGAAACAATGCCTCCATATCGATAAAGGA CGCGCGTATCGATAAGCGCTAGAGTACCAGTGCGACACGGACTACACTAT TTTCCGTGCTGCTGCAGCAAACTACAGAGTCCGGATACCCAGGTTTCAGC CCATTGTGCTCTTTGTCGCCGGCTCCGCTATATCTCTGTGAGGCCAGGCA GCAGTCCTGGTTCCATTCCTGTACATGAGCTTATGCGGTTACAGGAGCCT GTTCACCCTCCGCATATTCGGGTCTTTCGCGCTACAGGTGCCGAACAGTA ACAGTAACCGTTTTTCTTCTGTTCCCAGAGCAGAGAAACGGCAGTATTGT CTTGGTGTTTTAGGTGCTCTAGAAGTGCACCAACGAGGGTTACGTGTGTT TTGTGGGTTACTAAATTGTACATAACCGCGCGACCCGATACTGAGAGACT AGTCTTTCTATGCTACTCGTATGCCTCCTTATGGGAGGGGATCAGTGATT GCGGCCGCCGTCACGACACCTTTTGATAAGATGCGATAAATGGGGACACG CCTTCTCTACGTTTTCTCTTAAGACTTGCTGCACCCCTCCATATTCCTCC TCGCCTCTATCGTTACTGAGCCAATTCTCCCGCATGACGTCATCACCGTG TGTGGTCATGACGTAATCACATATTATATAGCAGTATAGTATAGCAGTAT ATTATATAGGATATAGTATGGATCAACCGAATATGGTTGACAATCCTGCT CGTGGTCAGCTGAACAGGGAAAAAGAATGTTCCATGTCCCTGTTCGCGCC CGAGAATTTGGTATCTCGAGACGGAGTCGGTCATCCCGTACATTGTTCGC TTGAAGGACGGGGCGTGTTTGGCAATAAGGTGGTAGTATGTGCTGCTGCA ACATGTTTGGTGTAACGAAGTATCCGCAAAACTGACTCAAAAACTCTTTA AAACATATTTTACCCTTTATCTACACAATAAATGTGTAGTAGTCAGCTAA AGTATACTGATAGATTATATAAAAAAGACATTTTCCGCTTACGTCCAAAC CTTTTTACCACCCCCCTTCAATAAGGAGTAGTTAAAGCAATCTACCTGTA ACTACTATCCCACAACACGCAGAAGGTATGATTTTTTTTACTGCTGTACC CCCAACCCCCATTTTCTTCTAACCAATATCCATAACGATTCAGAAACATA ATTAACTATTAACCCTTCCGGAACTCGATTTCAAGTTTTATTAGTATAGA AAAAAACAGATGGAGTTCCATAGGGGTTAATTGAAAGCCAGCCTCCGTTC TTCTTAAAGTCCATTACTCTCTAAGTCTAAGCTCTTGTTTGGAGTTCTCC CGCATGATAAATGATGTAAGTGGACGGGATAATGGACGTTTCCCCGATAG TGTATTATACCGTTGACCCGATTAACATACTATTATTATTGGGGAACACA TGTGAAGATTTTGTGCTCAAATATAGCTATGTACACATTGCAACCTGACG ATATTTGGTCCCCTTGGCTGCACCTTTTATGGTGCTAAGAAGGTGTGGCT GATCGGAGGGTTGGAATGAGTTTATAGGTTACTAAACAAAACCAGAATGA TGCACGAGTACAAGCACAGGAGAAAGCTCTGAAATGCTCGTCGTTACCAA ACAAAGCTCTGATTATGATTTTGGCACAATTTTCTATCGGTTTCTCTTAT CGGATTTACTTTCATTTTTACTGTAATGGGGTTTGCTACTGTAATGGGGT TTGCAGGGCGGGCACCATTCTCTTTCAGGGCCGCTGTTGATCAACGCGCA GTATCTTATCAGGCTTCAGTTTCCGCTTGGCTACAACTTCCTGCGGATTC TACGATACAAAAGTTCGGCGTCCTCGGGAATCCCAGGCCTGCAGCTCCCG GCGTTCGATATGCTCATGACAGAAATGAAGACAGTGCCGGTGCTGGGAAC AGACTTCAACATCTACGCGCCAATGTTGCTGCTGGTTTTGTGCATGTTCA CGTTTTACAAGGTAAATCATGGTTTACAAAGTAGTCACGGTTTTCAAGTT TCACAAAAGTGTTAACAAAAGTGTTAACAAAAGTGTTCTGCTGCTGACAA TGCTGACAATGGAGCCAGACTCGAGTATGACAACTAGTCTTGAACAAAAA TATACAGTAGTGCTTCTTATGCCCATCTAATGTAGTAACGTTTTGTGTGT CTCCAGAACGATGTCGAAATGACGATCGCTACCCGCCATGCGTCAATTGT CGAGCAGGGATACGCGCGTACTCTGAGATTGGTGGGGTTGGAGCACGAAG ATCTGGTGTCCTTAGACGATCCAGACGGGAACGCGCGGCTGGAGGAGGGC CGAGCGCTGCTTGAGCGCGGAAAGCGCCAGGCGCAAGTCGTTGCCCTCAA AAGTAAGGTACGACATTGGCCCGTTCGCCACTACTTCTATGGACCTTTCT TGTTAAGTGATAAACAAGATAAGTTGTCAAGGGCGTCAACACAACGATTG CCCAAGCGGGAAACAAGAGTCGGAAGCACCTTATTTTTCGCACACGAGCA CGCTCTCTGCCGTTACTACCCCCGTAGCCTTGTCTGTACCAGTTTAAAGA CTTTTTTCGTTTCCTACGAAGCGAGATACGCTTGGTCGACGGTGAAGCAG CGATTCCTCGCAAACGTATCTGAACTCCTCTTCCTGGCATCGCTTCCGCG CCTGGGTAGCGCTTGTCTTTGGCATAGATCTGGAAATGTCAATGCTGTCG ATTTGCTGAACTGGTTGCCGTGCCTCTAACGATTTCGACATCTCGACGCC AGGGAGAAAGGGACGATCAGACGCCGAACTCTTCACCAACCAGAAGGGGG ATGTGGAATGTGGCACCCCCGGTCGCGTACAGCAAAATCGAAGATACCTC GTCCAAGCCCAAACTCGACATCGAAGATGCGTAGCTCAATGACCCGCCCC ACCCCCCCCCCCCCCCCCCCACACCCCCCCACCCCCCCCCCCCAACCCCC CCCAAAAAAGTGGGGTGCCTAGCACCCCCCCCCCCCCCCCCCCCCTCCGC AAGAGTGGCTAGGCTTTAGATCATGTCAGCCTTCGCGTTGATGAAAATTC GAACGGTGCAAGCGTCGTAAGCGTGAAACTCCTAGTCGCAAAGGTGATAA CTCATAGTTAGCTGCTGGTAACGGAGAAACTCCTAGCTAGCTAGCTGCTG GTCACTGCTTTGCTGTGGTGGTGCACAAGACTTTAAATTATATTACAGCC ATGTCCAGTGTTGGGCGAGACGACCACATTCCACAAATCTTTGGCTTGCG GGTACAAGGTTTGCCTATCTGGACCACCATCTTTCATTCGTCGACTGCAG AGTGCGCTGTGGCACCGATGGCCAATGATCACGAGGGGCTTTGAGTATGC AGAGGCAAAGCGACTGCACTGCATGCTATTATTATTGTTGAAAAGGGAAG ATGCGGTGGTTCGGGATATAGGTTTTTGACGAAACAATTGCTTGGACACT CGTTTTTTAACATTGTGACATTAGTTTGTTATCTTTTTCAAAAGTGCTCC AAGTGTCAACGGAAGGTAGGCTTTCTTAGTCTTTTTTTAGTTGAAGTTGC ATAGTGTAGGTGTGTCATGAGTGCAATTCACTCAAAAATCTAATTATTGC CAAGAGTGTGCAGCTTTGACAGTTGTATTTTTTGTCACTATTATTGTGTA GATGCATAATTTTCTTCTGTACTTTTACCTGTCGCTTCGGCAAATGACAC GCGTCTCACATGCCTCTTCTTCGGATTACGTTGTGGGGTGCAGCAGCCTC TGCTGGGACCTCGTTTTTTCTCAACAAAGCGGTTCTGAGTTGGGATCCAT TTGGTGATATGAAGTGCTTTTCAAAGAGACTAACAGCGAAGAAAATTAAA TATCGGTAGTCATCGACGTCGATAGTAATGTTGTATAGTAATAGTGTGGA TCAAATTCGTTTTGGGTATGTCTTAGGTTTCACTGACCAGTTCCAATGAA TGTATGAAACAAGGTCGATCAAAAGGATTATTATTATAGCCTTTCAGCTC TCCAGGGACGGTTTGGTAGAGCCAAAACATATCCCTAGTGTATCATCGAC ACCCTGTAGTACTACTATATTAATGGCTTGACGACACCATCTCCTAACAA GGTCAGCATGCGGTTTGTTTCAGGCTTAAACTATAATAATAGTAAATTCA AGGTATTATAATGGCTACACCTCCACAGGAATTACGATTTGGTTTATTTC CCGCTTTTCATGGCCCCCCTTCACGGAATCGAACACGACCGGCCC
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Coding sequence (CDS) from alignment at H-elongata_contig15258:138..7532-

>mRNA_H-elongata_contig15258.3472.1 ID=mRNA_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3408bp|location=Sequence derived from alignment at H-elongata_contig15258:138..7532- (Himanthalia elongata Himel1 dioecious)
AGCCGTTGGATCACCCGAGTTTGGTTCGCACTATACTGGACCACGTTTCT
GCTGGCATGGGTCGTCATCCCCATCTTGTACCAGTCGTGGCGGAGGGGAG
AGCTCACCTGGAAAGAAAGGCTTAGGTCCGCGGTACGGATGAACATACGA
CAGTATTTGTTCATGGCGCTGGTTCTCGTGCTGTTCGTGGTCTATCTCGT
CGGAAGAGCCGTTGGATCACCCGAGTTTGGTTCGCACTATACTGGACCAC
GTTTCTGCTGGCATGGGTCGTCATCCCCATCTTGTACCAGTCGTGGCGGA
GGGGAGAGCTCACCTGGAAAGAAAGGCTTAGGTCCGCGGTACGGATGAAC
ATACGACAGTATTTGTTCATGGCGCTGGTTCTCGTGCTGTTCGTGGTCTA
TCTCGTCGGAAGCGGGAAGGTAAACGCTGGCAAGGTGGGAGGGTTTTTAA
TGGCCCTCGCGAACACGTATGGTCTCGTCTTCATCATCTTGCTCCTGGGG
CACGGTCTGGTGCAGGTGCCTCGGAAGCTCTGGGAGACCAGCTTTAACGA
AAGGGAGCTCCAGCGTCATTATTTCATCGCGACGAAGCGGGAAGGTAAAC
GCTGGCAAGGTGGGAGGGTTTTTAATGGCCCTCGCGAACACGTATGGTCT
CGTCTTCATCATCTTGCTCCTGGGGCACGGTCTGGTGCAGGTGCCTCGGA
AGCTCTGGGAGACCAGCTTTAACGAAAGGGAGCTCCAGCGTCATTATTTC
ATCGCGACGAAGGTCGATACGGATATGCAAGACGCGGTATTCGATCTCGA
GGAAGCGGAGGATCATATCGATTGTATGGAGAAATCCATGGAGGCCGAAG
AGTGCGTGCTTCCGGGCGACAGGCCGCAGCTAATCGGCATCCTAGCTGCT
ATCCGGAAAACGGAAACCGCCTTTTACGACGAAATTGACGACGGTTTGCT
CCGAAAGGCGAGCGTCCCATTGGCTGTCGATACGGATATGCAAGACGCGG
TATTCGATCTCGAGGAAGCGGAGGATCATATCGATTGTATGGAGAAATCC
ATGGAGGCCGAAGAGTGCGTGCTTCCGGGCGACAGGCCGCAGCTAATCGG
CATCCTAGCTGCTATCCGGAAAACGGAAACCGCCTTTTACGACGAAATTG
ACGACGGTTTGCTCCGAAAGGCGAGCGTCCCATTGGCTCATGAAAACCGA
AAGCCAAATGACACCAGGACGCCAGCGGAAGCTTTCCGAGACCTAGGGTT
GGTCATCCTCACCCCTCGAGACGCGGCCAAGCTGCACTCTGAATTGCGAG
CGGCGCAGGTCAAGGTCGTGGCGATGAAGACAAAGTGGGCGAAGCTAGTA
CGAAACACGGACAAGCATGAAAACCGAAAGCCAAATGACACCAGGACGCC
AGCGGAAGCTTTCCGAGACCTAGGGTTGGTCATCCTCACCCCTCGAGACG
CGGCCAAGCTGCACTCTGAATTGCGAGCGGCGCAGGTCAAGGTCGTGGCG
ATGAAGACAAAGTGGGCGAAGCTAGTACGAAACACGGACAAGCTCCAGTG
CCTGCTGGACGAAATTCCGTGGGGTGAAGCGGTTTTTGAAACGGCTCCAG
GGAAGACGGTGGTCCAATACTTGAAGATGGTGCTCAAGCGAATCCAGAAC
CGCTCTTGGTGGATCTGGCAGGCGTATGTTCGTTGGCTCTGCTGCAGGAC
GTTGGCAGTCCTGTGCGCCGTGTTGAGTGCAGCGATTGTGTGGAGCGAGC
TCCAGTGCCTGCTGGACGAAATTCCGTGGGGTGAAGCGGTTTTTGAAACG
GCTCCAGGGAAGACGGTGGTCCAATACTTGAAGATGGTGCTCAAGCGAAT
CCAGAACCGCTCTTGGTGGATCTGGCAGGCGTATGTTCGTTGGCTCTGCT
GCAGGACGTTGGCAGTCCTGTGCGCCGTGTTGAGTGCAGCGATTGTGTGG
AGCGAGGTGGTTGGAGCGAGTCGGTGGAACCTAAGCCCCTTCGGCATCCT
CCTGTGGTTCATGTTCCGACAAGAAGCAGGCATCGCTCATGCCCTATCCA
TGCAGGTGGTTGGAGCGAGTCGGTGGAACCTAAGCCCCTTCGGCATCCTC
CTGTGGTTCATGTTCCGACAAGAAGCAGGCATCGCTCATGCCCTATCCAT
GCAGGCAGCAGTCCTGGTTCCATTCCTGTACATGAGCTTATGCGGTTACA
GGAGCCTGTTCACCCTCCGCATATTCGGGTCTTTCGCGCTACAGGCAGCA
GTCCTGGTTCCATTCCTGTACATGAGCTTATGCGGTTACAGGAGCCTGTT
CACCCTCCGCATATTCGGGTCTTTCGCGCTACAGGGCGGGCACCATTCTC
TTTCAGGGCCGCTGTTGATCAACGCGCAGTATCTTATCAGGCTTCAGTTT
CCGCTTGGCTACAACTTCCTGCGGATTCTACGATACAAAAGTTCGGCGTC
CTCGGGAATCCCAGGCCTGCAGCTCCCGGCGTTCGATATGCTCATGACAG
AAATGAAGACAGTGCCGGTGCTGGGAACAGACTTCAACATCTACGCGCCA
ATGTTGCTGCTGGTTTTGTGCATGTTCACGTTTTACAAGGGCGGGCACCA
TTCTCTTTCAGGGCCGCTGTTGATCAACGCGCAGTATCTTATCAGGCTTC
AGTTTCCGCTTGGCTACAACTTCCTGCGGATTCTACGATACAAAAGTTCG
GCGTCCTCGGGAATCCCAGGCCTGCAGCTCCCGGCGTTCGATATGCTCAT
GACAGAAATGAAGACAGTGCCGGTGCTGGGAACAGACTTCAACATCTACG
CGCCAATGTTGCTGCTGGTTTTGTGCATGTTCACGTTTTACAAGGGATAC
GCGCGTACTCTGAGATTGGTGGGGTTGGAGCACGAAGATCTGGTGTCCTT
AGACGATCCAGACGGGAACGCGCGGCTGGAGGAGGGCCGAGCGCTGCTTG
AGCGCGGAAAGCGCCAGGCGCAAGTCGTTGCCCTCAAAAGTAAGGGATAC
GCGCGTACTCTGAGATTGGTGGGGTTGGAGCACGAAGATCTGGTGTCCTT
AGACGATCCAGACGGGAACGCGCGGCTGGAGGAGGGCCGAGCGCTGCTTG
AGCGCGGAAAGCGCCAGGCGCAAGTCGTTGCCCTCAAAAGTAAGGGAGAA
AGGGACGATCAGACGCCGAACTCTTCACCAACCAGAAGGGGGATGTGGAA
TGTGGCACCCCCGGTCGCGTACAGCAAAATCGAAGATACCTCGTCCAAGC
CCAAACTCGACATCGAAGATGCGTAGGGAGAAAGGGACGATCAGACGCCG
AACTCTTCACCAACCAGAAGGGGGATGTGGAATGTGGCACCCCCGGTCGC
GTACAGCAAAATCGAAGATACCTCGTCCAAGCCCAAACTCGACATCGAAG
ATGCGTAG
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