prot_H-elongata_contig152568.3471.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152568.3471.1
Unique Nameprot_H-elongata_contig152568.3471.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: H3G957_PHYRM (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3G957_PHYRM)

HSP 1 Score: 77.4 bits (189), Expect = 1.310e-15
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRVSS 48
            MAHGDP KPVV FIAG+TAPPGRRMGHAGAI+SGGKGTA G +  + +
Sbjct:  247 MAHGDPNKPVVSFIAGTTAPPGRRMGHAGAIVSGGKGTAAGKFAALEA 294          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A7S3NF98_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF98_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.790e-15
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    2 AHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTA 39
            AHGDP KPVVGFIAG+TAPPGRRMGHAGAI+SGGKGTA
Sbjct:  238 AHGDPNKPVVGFIAGTTAPPGRRMGHAGAIVSGGKGTA 275          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: F0YDA5_AURAN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA5_AURAN)

HSP 1 Score: 74.7 bits (182), Expect = 1.220e-14
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    2 AHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTA 39
            AHGDP KPVVGFIAG+TAPPGRRMGHAGAI+SGGKGTA
Sbjct:  233 AHGDPDKPVVGFIAGTTAPPGRRMGHAGAIVSGGKGTA 270          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A7S0Q9W7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q9W7_9EUKA)

HSP 1 Score: 72.8 bits (177), Expect = 1.380e-14
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    3 HGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRVSS 48
            HGDP KPVV FIAG+TAPPGRRMGHAGAI+SGGKGTA   +  +S+
Sbjct:  121 HGDPNKPVVSFIAGTTAPPGRRMGHAGAIVSGGKGTAAAKFAALSA 166          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: K3WLB6_GLOUD (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLB6_GLOUD)

HSP 1 Score: 74.3 bits (181), Expect = 1.770e-14
Identity = 35/48 (72.92%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRVSS 48
            M HGDP KPVV FIAG TAPPGRRMGHAGAI+SGGKGTA G +  + +
Sbjct:  245 MEHGDPNKPVVSFIAGITAPPGRRMGHAGAIVSGGKGTAEGKFAALEA 292          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: D7FJ40_ECTSI (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ40_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.850e-14
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTA 39
            M HGDP KPVV FIAGSTAPPGRRMGHAGAIISGGKGTA
Sbjct:  248 MEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTA 286          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A7S1CAF8_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAF8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.810e-14
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTA 39
            M HGDP KPVVGFIAG TAPPGRRMGHAGAI+SGGKGTA
Sbjct:  263 MEHGDPAKPVVGFIAGLTAPPGRRMGHAGAIVSGGKGTA 301          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A2D4BH57_PYTIN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BH57_PYTIN)

HSP 1 Score: 73.6 bits (179), Expect = 3.530e-14
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    2 AHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRV 46
            AHGDP KPVV FIAG TAPPGRRMGHAGAI+SGGKGTA G +  +
Sbjct:  249 AHGDPNKPVVSFIAGITAPPGRRMGHAGAIVSGGKGTAEGKFAAL 293          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A7V8AJJ2_9PROT (Succinyl-CoA synthetase alpha subunit n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V8AJJ2_9PROT)

HSP 1 Score: 69.7 bits (169), Expect = 3.860e-14
Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRVSS 48
            + H   KKPVVGFIAG+TAPPGRRMGHAGAIISGGKGTA   Y  + S
Sbjct:   43 IKHNKVKKPVVGFIAGATAPPGRRMGHAGAIISGGKGTAADKYETLRS 90          
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Match: A0A418B6N8_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B6N8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.070e-14
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRV 46
            M HGDP KPVV FIAG TAPPGRRMGHAGAI+SGGKGTA G +  +
Sbjct:  565 MEHGDPNKPVVSFIAGITAPPGRRMGHAGAIVSGGKGTAEGKFAAL 610          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152568.3471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3G957_PHYRM1.310e-1575.00Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S3NF98_9STRA8.790e-1592.11Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
F0YDA5_AURAN1.220e-1492.11Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0Q9W7_9EUKA1.380e-1473.91Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
K3WLB6_GLOUD1.770e-1472.92Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
D7FJ40_ECTSI1.850e-1492.31Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S1CAF8_9STRA2.810e-1489.74Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A2D4BH57_PYTIN3.530e-1477.78Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7V8AJJ2_9PROT3.860e-1472.92Succinyl-CoA synthetase alpha subunit n=1 Tax=Rhod... [more]
A0A418B6N8_9STRA4.070e-1476.09Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 1..46
e-value: 1.1E-12
score: 49.8
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 6..41
NoneNo IPR availablePANTHERPTHR11117SUCCINYL-COA LIGASE SUBUNIT ALPHAcoord: 7..41
NoneNo IPR availablePANTHERPTHR11117:SF17SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT ALPHAcoord: 7..41
IPR017440ATP-citrate lyase/succinyl-CoA ligase, active sitePROSITEPS00399SUCCINYL_COA_LIG_2coord: 16..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152568contigH-elongata_contig152568:1225..1377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152568.3471.1mRNA_H-elongata_contig152568.3471.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152568 1198..1377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152568.3471.1 ID=prot_H-elongata_contig152568.3471.1|Name=mRNA_H-elongata_contig152568.3471.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MAHGDPKKPVVGFIAGSTAPPGRRMGHAGAIISGGKGTAPGGYPRVSSIL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016102Succinyl-CoA_synth-like
IPR017440Cit_synth/succinyl-CoA_lig_AS