mRNA_H-elongata_contig15244.3461.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15244.3461.1
Unique NamemRNA_H-elongata_contig15244.3461.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 3.730e-83
Identity = 145/236 (61.44%), Postives = 164/236 (69.49%), Query Frame = 1 
Query:   22 LARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSG--------------------------------------SRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNS---------KAPSYPEFSKL 588
            LA QESF+AVERCPQPVIAA+HG C+GGAVDLACACDIR CS+DA FC+AEVKVGLAADVGTLQRMP+IVGNESLCRELAYTGRTFGAAEA+ MG VSRV+ +                                       S+R EVV A + TA+EIARQSPVAVFGTKRN++Y RDHS+ DGL+YAATWSGAALQA DL  AMRA+      S         +A S+P FSKL
Sbjct:   98 LAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 333
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BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: A0A7K8NX74_CASCA (ECH1 protein (Fragment) n=1 Tax=Casuarius casuarius TaxID=8787 RepID=A0A7K8NX74_CASCA)

HSP 1 Score: 205 bits (522), Expect = 6.830e-63
Identity = 110/194 (56.70%), Postives = 142/194 (73.20%), Query Frame = 1 
Query:    7 LRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            LRQ+  A QESFSA+E+CP+PVIAAVHG C+GG VDL  ACDIR+CSQDA F + EV +GLAADVGTLQR+P+IVG++SL  ELA+T R   A EA   GLVSRV      +  ++Q  L  AA +A +SPVAV GTK N++Y RDH + +GL+YAATW+ + LQ ED+ K+++A+L KK+    PS   F+KL
Sbjct:   26 LRQKIRAYQESFSALEKCPKPVIAAVHGACIGGGVDLVTACDIRYCSQDAWFQVKEVDIGLAADVGTLQRLPKIVGSQSLVNELAFTARKLTAPEALSCGLVSRVFPD---KAALLQGALELAATVASKSPVAVQGTKVNLVYARDHPVPEGLRYAATWNMSMLQTEDVLKSVQAALEKKD----PSEVAFAKL 212
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: UPI002019A207 (LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Corvus TaxID=30420 RepID=UPI002019A207)

HSP 1 Score: 205 bits (521), Expect = 7.990e-61
Identity = 111/195 (56.92%), Postives = 138/195 (70.77%), Query Frame = 1 
Query:    4 NLRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            NLRQR L  QESFS +E+CP+PVIAAVHG C+G  VDL  ACDIRFCSQDASF + EV +GLAADVGTLQR+P+IVGN+SL  ELA+T R   A EA   GLVSRVL     +  +++  L  AA IA +SPVAV G K N++Y RD  + +GL + ATW+ A LQ ED+PK+++A+L KK     P    F+KL
Sbjct:  174 NLRQRILELQESFSVMEKCPKPVIAAVHGPCIGAGVDLISACDIRFCSQDASFQVKEVDMGLAADVGTLQRLPKIVGNQSLVNELAFTARVMRAPEALSCGLVSRVLPD---KATLLEVALEVAAAIATRSPVAVQGXKVNLVYSRDRPVAEGLLHVATWNMAMLQTEDIPKSVQAALDKKGPEDVP----FAKL 361
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BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: A0A8C8RVU7_9SAUR (Enoyl-CoA hydratase 1 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8RVU7_9SAUR)

HSP 1 Score: 202 bits (514), Expect = 2.560e-60
Identity = 109/195 (55.90%), Postives = 138/195 (70.77%), Query Frame = 1 
Query:    4 NLRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            NLR+     QESFS +E+CP+P+IAAVHG C+GG VDL  ACDIR+C+QDA F + EV +GLAADVGTLQR+PRI+GN+SL  ELA+T R   A EA   GLVSRV      +Q +++     AA+IA +SPVAV GTK NI+Y RDHS+ +GLQY ATW+ + LQ EDL K+ +A + KK+    P    FSKL
Sbjct:  129 NLRKMIREYQESFSVLEKCPKPIIAAVHGGCIGGGVDLISACDIRYCTQDAWFQVKEVDIGLAADVGTLQRLPRIIGNQSLVNELAFTARKMMAPEAESSGLVSRVF---QDKQAMLEGSFELAADIASKSPVAVQGTKINILYSRDHSVSEGLQYMATWNMSMLQTEDLVKSAQAVMEKKS----PKDVVFSKL 316
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BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: UPI00123831FF (LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Geospiza parvula TaxID=87175 RepID=UPI00123831FF)

HSP 1 Score: 201 bits (510), Expect = 5.750e-60
Identity = 109/194 (56.19%), Postives = 138/194 (71.13%), Query Frame = 1 
Query:    7 LRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            LR+R L  QESF  +E+CP+PVIAAVHG C+G  VDL  ACDIRFCSQDASF + EV +GLAADVGTLQR+P+IVG++SL  ELA T R   A EA   GLVSRVL     ++ ++   L  A+ IA +SPVAV GTK N++Y RD  + +GLQ+AATW+ A LQ ED+PK+++A+L KK     P    F+KL
Sbjct:  110 LRRRILELQESFXVMEKCPKPVIAAVHGPCIGAGVDLISACDIRFCSQDASFQVKEVDMGLAADVGTLQRLPKIVGSQSLVNELALTARVMRAPEALSCGLVSRVLPD---KETLLDXALGVASAIAARSPVAVQGTKINLVYARDRPVSEGLQHAATWNMAMLQTEDIPKSVQAALDKKGPEDVP----FAKL 296
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 201 bits (512), Expect = 6.070e-60
Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 1 
Query:    7 LRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            LR+  L+ QESFS +E+CP+PVIAA+H  C+GG VDL CACDIR CS DA F I EV +GLAADVGTLQR+P+IVGN+SL REL+YT R   A EA   GLVS +      ++ ++ A    A++IA +SPVAV GTK N+ Y RDHS+E+GL Y ATW+ + LQ ED+ KA++A ++K+        P FSKL
Sbjct:  139 LRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPD---KESLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQAEMAKEK-------PTFSKL 322
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: UPI00193EE9EA (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 n=1 Tax=Mauremys reevesii TaxID=260615 RepID=UPI00193EE9EA)

HSP 1 Score: 201 bits (511), Expect = 1.010e-59
Identity = 104/182 (57.14%), Postives = 135/182 (74.18%), Query Frame = 1 
Query:    4 NLRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKN 549
            NLR++    QESF+ +ERCP+PVIAAVHG C+GG VDL  ACDIR+C+QDA F + EV +GLAADVGTLQR+PRI+GN+SL  ELA+T R   A EA   GLVSRV      +Q +++     AA+IA +SPVAV GTK N+IY RDHS+ +GL+Y ATW+ + LQ EDL K+ +A++ KK+
Sbjct:  141 NLRKKIREYQESFTVLERCPKPVIAAVHGGCIGGGVDLISACDIRYCTQDAWFQVKEVDIGLAADVGTLQRLPRIIGNQSLVNELAFTARKMMAPEAESSGLVSRVF---QDKQAMLEGAFELAADIAGKSPVAVQGTKVNLIYSRDHSVPEGLRYMATWNMSMLQTEDLMKSAQAAVEKKS 319
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BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: A0A8K1FZ41_9PASS (Uncharacterized protein n=1 Tax=Zosterops borbonicus TaxID=364589 RepID=A0A8K1FZ41_9PASS)

HSP 1 Score: 200 bits (508), Expect = 1.290e-59
Identity = 107/194 (55.15%), Postives = 140/194 (72.16%), Query Frame = 1 
Query:    7 LRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            LRQ+ +  QESF+A+ERCP+PVIAAVHG C+G  VDL  ACDIRFCSQDA+F + EV +GLAADVGTLQR+P+IVG++SL  ELA+T R   A EA   GLVSRVL     ++ +++  L  A+ IA +SPVAV GTK N++Y RD  + +GL + ATW+ A LQ ED+PK+++A+L KK     P    F+KL
Sbjct:  114 LRQKVVELQESFTAMERCPKPVIAAVHGPCIGAGVDLISACDIRFCSQDAAFQVKEVDMGLAADVGTLQRLPKIVGSQSLVNELAFTARVMRAPEALTCGLVSRVLPD---KETLLEVALGVASAIAARSPVAVQGTKVNLLYSRDRPVSEGLHHVATWNMAMLQTEDIPKSVQAALDKKGPEDVP----FAKL 300
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: A0A674IIB4_TERCA (Enoyl-CoA hydratase 1 n=21 Tax=Durocryptodira TaxID=1579337 RepID=A0A674IIB4_TERCA)

HSP 1 Score: 200 bits (509), Expect = 1.440e-59
Identity = 106/181 (58.56%), Postives = 132/181 (72.93%), Query Frame = 1 
Query:    4 NLRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKK 546
            NLR++    QESF+ +ERCP+PVIAAVHG C+GG VDL  ACDIR+C+QDA F I EV +GLAADVGTLQR+PRI+GN+SL  ELA+T R   A EA   GLVSRV      +Q ++      AA+IA +SPVAV GTK N+IY RDHS+ +GL+Y ATW+ + LQ EDL K+ +A L KK
Sbjct:  129 NLRKKIREYQESFTVLERCPKPVIAAVHGGCIGGGVDLISACDIRYCTQDAWFQIKEVDIGLAADVGTLQRLPRIIGNQSLVNELAFTARKMMAPEAESSGLVSRVF---QDKQAMLDGAFELAADIAGKSPVAVQGTKVNLIYSRDHSVPEGLRYMATWNMSMLQTEDLMKSAQAVLEKK 306
[Close]
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Match: UPI0017497BD8 (LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Molothrus ater TaxID=84834 RepID=UPI0017497BD8)

HSP 1 Score: 199 bits (507), Expect = 2.360e-59
Identity = 108/194 (55.67%), Postives = 137/194 (70.62%), Query Frame = 1 
Query:    7 LRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQDASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAGMGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHSIEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL 588
            LR+R L  QESFS +E+CP+PVIAAVHG C+G  VDL  ACDIRFCSQDASF + EV +GLAADVGTLQR+P+IVG++SL  ELA T R   A EA   GLVSRVL     ++ ++      A+ IA +SPVAV GTK N++Y RD  + +GLQ+ ATW+ A LQ ED+PK+++A+L KK     P    F+KL
Sbjct:  123 LRRRILEFQESFSVMEKCPKPVIAAVHGPCIGAGVDLISACDIRFCSQDASFQVKEVDMGLAADVGTLQRLPKIVGSQSLVNELALTARVMRAPEALSCGLVSRVLPD---KETLLDVAFGVASAIAARSPVAVQGTKINLVYARDRPVSEGLQHVATWNMAMLQTEDIPKSVQAALDKKGPEDVP----FAKL 309
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15244.3461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ0_ECTSI3.730e-8361.44Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ect... [more]
A0A7K8NX74_CASCA6.830e-6356.70ECH1 protein (Fragment) n=1 Tax=Casuarius casuariu... [more]
UPI002019A2077.990e-6156.92LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl... [more]
A0A8C8RVU7_9SAUR2.560e-6055.90Enoyl-CoA hydratase 1 n=1 Tax=Pelusios castaneus T... [more]
UPI00123831FF5.750e-6056.19LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl... [more]
A0A6P8I096_ACTTE6.070e-6054.64delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI00193EE9EA1.010e-5957.14delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A8K1FZ41_9PASS1.290e-5955.15Uncharacterized protein n=1 Tax=Zosterops borbonic... [more]
A0A674IIB4_TERCA1.440e-5958.56Enoyl-CoA hydratase 1 n=21 Tax=Durocryptodira TaxI... [more]
UPI0017497BD82.360e-5955.67LOW QUALITY PROTEIN: delta(3,5)-Delta(2,4)-dienoyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15244contigH-elongata_contig15244:4486..6068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.3
Seed ortholog evalue5.6e-69
Seed eggNOG ortholog2880.D8LBQ0
Preferred nameECH1
KEGG koko:K12663
KEGG Pathwayko04146,map04146
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionperoxisomal enoyl-coenzyme A hydratase
Ec32 orthologEc-27_003160.1
Exons2
Model size796
Cds size591
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15244.3461.1prot_H-elongata_contig15244.3461.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15244 4691..6068 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929900.8286085-UTR-H-elongata_contig15244:4485..46901622929900.8286085-UTR-H-elongata_contig15244:4485..4690Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15244 4486..4690 -
1691679200.8428662-UTR-H-elongata_contig15244:4485..46901691679200.8428662-UTR-H-elongata_contig15244:4485..4690Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15244 4486..4690 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929900.8413875-CDS-H-elongata_contig15244:4690..50561622929900.8413875-CDS-H-elongata_contig15244:4690..5056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15244 4691..5056 -
1691679200.8654003-CDS-H-elongata_contig15244:4690..50561691679200.8654003-CDS-H-elongata_contig15244:4690..5056Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15244 4691..5056 -
1622929900.8548987-CDS-H-elongata_contig15244:5843..60681622929900.8548987-CDS-H-elongata_contig15244:5843..6068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15244 5844..6068 -
1691679200.893375-CDS-H-elongata_contig15244:5843..60681691679200.893375-CDS-H-elongata_contig15244:5843..6068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15244 5844..6068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15244.3461.1

>prot_H-elongata_contig15244.3461.1 ID=prot_H-elongata_contig15244.3461.1|Name=mRNA_H-elongata_contig15244.3461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
MNLRQRFLARQESFSAVERCPQPVIAAVHGTCLGGAVDLACACDIRFCSQ
DASFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAAG
MGLVSRVLGSGSRRQEVVQACLRTAAEIARQSPVAVFGTKRNIIYGRDHS
IEDGLQYAATWSGAALQAEDLPKAMRASLSKKNNSKAPSYPEFSKL*
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mRNA from alignment at H-elongata_contig15244:4486..6068-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15244.3461.1 ID=mRNA_H-elongata_contig15244.3461.1|Name=mRNA_H-elongata_contig15244.3461.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1583bp|location=Sequence derived from alignment at H-elongata_contig15244:4486..6068- (Himanthalia elongata Himel1 dioecious)
ATGAATCTGCGTCAACGGTTTCTTGCAAGACAGGAATCCTTTTCGGCAGT
AGAACGCTGCCCTCAGCCCGTCATCGCTGCAGTGCATGGCACGTGCCTCG
GAGGAGCGGTAGACCTCGCGTGCGCGTGCGATATCCGCTTTTGCTCCCAA
GACGCCAGTTTCTGCATTGCGGAGGTCAAGGTTGGGCTAGCGGCGGACGT
TGGGACGTTGCAAAGAATGCCTAGGGTGAGGTTTCTTTGATCTAGAAGCG
AAAAATACCTTAGCCCGATGTTTGTTATTTTTTGGAAATCGATTTTCGCG
ATGAACTCCGTTAAACTTAGCTCAGACGTGCCATGGTACTGAAAAACTTG
TGATGGTAAAATTGCCTGGCGTCAACTGAGGTCGTATATTGCTCGTCCGG
TATTTTTCGTAGGTTTCGGCACCATCACATGCGAATATCTTACGCAGATC
TTCTCTCTCACCATGTCCAGTTGAAAGGTTTGACTCGTCTCTAACTCATG
GATATATATTAATTAAAAAACCTTGAACTCATTAGAACCCTTGGAACATC
CACGCCTTCTTAGCACCATGAGAGGTGCATGTCCAGGGGACCAACTATCG
TCAGGTTCTAATGTGGACATTACTACTTTTGAGCACAAAATCGTCACACG
TGATTAATCATTATATATGGGGACGCCAACCAGAGCCTAGGGGGATGAAT
TGTGTGTCGTGGTTAGGAAGCGTTAGGCACAGCATTGTACGTATGTCTCA
GTTAAATTGGGAGGGAGAAAAAAGTAAAGAGGGTCACATTTTTACTACAT
TTAAGCATAAACTCGTAAGATGTGACTACTCATCATATGGGGACGCCAAG
CCAGGCTATCGTCGTATCAAAATTATTGCCGATTGATTTAAACTCCTTTC
TGGAAGCATATATTTTCCTTAATGTATTTCCTCGCTCTCGAAAATGCCCT
TGATGAATGGAATTGCCACGTTTGTGACCCGGCACGCACTCGGGATGAAT
TTGGGAGCGCAGATAGTGGGCAACGAATCGCTCTGCAGGGAGCTCGCATA
CACCGGCCGGACTTTCGGAGCCGCTGAAGCCGCTGGCATGGGACTGGTTT
CGCGCGTCCTGGGATCGGGGTCTCGTCGACAAGAAGTCGTGCAAGCCTGC
TTGCGGACAGCAGCAGAGATCGCACGACAGAGCCCGGTGGCTGTGTTTGG
CACCAAACGAAATATCATCTACGGCAGGGACCACAGCATCGAGGATGGGT
TACAGTACGCAGCGACGTGGAGCGGAGCAGCGCTCCAGGCGGAGGATCTT
CCAAAGGCGATGAGGGCCAGCCTATCGAAGAAAAATAATTCTAAGGCGCC
TTCATACCCAGAGTTTTCAAAATTGTAGCGCTTCGCAAACTCGGAGCTCC
TTCACGCCGATGCCCCATCCTATTTCTCTTCCAGTCAAATACTTCATTGT
GGCCCGTCATCGAAGCAAAAGCTTCGAGGGAGGAATATCTCGTGTGGGGT
AGATTCGAGCACAACAGTCAATGTTTTTTTTTAATTACGAGTTAAACCAG
CTTAGACAGGCACTGGAGAAATGTTACTCAATT
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Coding sequence (CDS) from alignment at H-elongata_contig15244:4486..6068-

>mRNA_H-elongata_contig15244.3461.1 ID=mRNA_H-elongata_contig15244.3461.1|Name=mRNA_H-elongata_contig15244.3461.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig15244:4486..6068- (Himanthalia elongata Himel1 dioecious)
ATGAATCTGCGTCAACGGTTTCTTGCAAGACAGGAATCCTTTTCGGCAGT
AGAACGCTGCCCTCAGCCCGTCATCGCTGCAGTGCATGGCACGTGCCTCG
GAGGAGCGGTAGACCTCGCGTGCGCGTGCGATATCCGCTTTTGCTCCCAA
GACGCCAGTTTCTGCATTGCGGAGGTCAAGGTTGGGCTAGCGGCGGACGT
TGGGACGTTGCAAAGAATGCCTAGGATGAATCTGCGTCAACGGTTTCTTG
CAAGACAGGAATCCTTTTCGGCAGTAGAACGCTGCCCTCAGCCCGTCATC
GCTGCAGTGCATGGCACGTGCCTCGGAGGAGCGGTAGACCTCGCGTGCGC
GTGCGATATCCGCTTTTGCTCCCAAGACGCCAGTTTCTGCATTGCGGAGG
TCAAGGTTGGGCTAGCGGCGGACGTTGGGACGTTGCAAAGAATGCCTAGG
ATAGTGGGCAACGAATCGCTCTGCAGGGAGCTCGCATACACCGGCCGGAC
TTTCGGAGCCGCTGAAGCCGCTGGCATGGGACTGGTTTCGCGCGTCCTGG
GATCGGGGTCTCGTCGACAAGAAGTCGTGCAAGCCTGCTTGCGGACAGCA
GCAGAGATCGCACGACAGAGCCCGGTGGCTGTGTTTGGCACCAAACGAAA
TATCATCTACGGCAGGGACCACAGCATCGAGGATGGGTTACAGTACGCAG
CGACGTGGAGCGGAGCAGCGCTCCAGGCGGAGGATCTTCCAAAGGCGATG
AGGGCCAGCCTATCGAAGAAAAATAATTCTAAGGCGCCTTCATACCCAGA
GTTTTCAAAATTGTAGATAGTGGGCAACGAATCGCTCTGCAGGGAGCTCG
CATACACCGGCCGGACTTTCGGAGCCGCTGAAGCCGCTGGCATGGGACTG
GTTTCGCGCGTCCTGGGATCGGGGTCTCGTCGACAAGAAGTCGTGCAAGC
CTGCTTGCGGACAGCAGCAGAGATCGCACGACAGAGCCCGGTGGCTGTGT
TTGGCACCAAACGAAATATCATCTACGGCAGGGACCACAGCATCGAGGAT
GGGTTACAGTACGCAGCGACGTGGAGCGGAGCAGCGCTCCAGGCGGAGGA
TCTTCCAAAGGCGATGAGGGCCAGCCTATCGAAGAAAAATAATTCTAAGG
CGCCTTCATACCCAGAGTTTTCAAAATTGTAG
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