prot_H-elongata_contig152416.3459.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152416.3459.1
Unique Nameprot_H-elongata_contig152416.3459.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
[Close]
BLAST of mRNA_H-elongata_contig152416.3459.1 vs. uniprot
Match: A0A6H5K4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T0_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.970e-8
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 MAASAKSGWLSREQLAVNEFARRVSLKRGAGLPAAAMAQWRRK 43
            ++A ++SGWLSREQ+A NEFARRV +KRG GL   A A+WRRK
Sbjct:  527 LSAWSESGWLSREQVAANEFARRVGVKRGVGLSMPASAEWRRK 569
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152416.3459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4T0_9PHAE4.970e-865.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152416contigH-elongata_contig152416:422..550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152416.3459.1mRNA_H-elongata_contig152416.3459.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152416 422..556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152416.3459.1 ID=prot_H-elongata_contig152416.3459.1|Name=mRNA_H-elongata_contig152416.3459.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MAASAKSGWLSREQLAVNEFARRVSLKRGAGLPAAAMAQWRRK
back to top