prot_H-elongata_contig15227.3454.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15227.3454.1
Unique Nameprot_H-elongata_contig15227.3454.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: UPI000B90799E (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B90799E)

HSP 1 Score: 59.3 bits (142), Expect = 1.110e-8
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEYVSLC 64
            L F +G    LS YAD+D+    DSRRSV+G  + LG++ I W+S  Q     ++ EAEY S+C
Sbjct:  179 LMFKKGDEFELSAYADSDWAKCIDSRRSVTGFCIFLGNSLISWKSKKQSVVSRSSAEAEYRSMC 242          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: A0A0V0H745_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H745_SOLCH)

HSP 1 Score: 54.3 bits (129), Expect = 3.540e-8
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   10 RLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEYVSL 63
            R+S Y D+D+ A  DSR+SV+G  V+LGD+ I W+S  Q+    ++ EAEY SL
Sbjct:    8 RVSAYCDSDWAACPDSRKSVTGYIVLLGDSPISWKSKKQETISLSSAEAEYRSL 61          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: UPI0006A6B0A5 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6B0A5)

HSP 1 Score: 57.0 bits (136), Expect = 5.290e-8
Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    7 SRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEYVSLCDVS 67
            S L+L+ Y+DAD+ A  DSR+S++G  V LGD+ I W+S  Q+    ++ EAEY ++ D +
Sbjct:   81 STLKLTAYSDADWAACPDSRQSITGYCVFLGDSLISWRSKKQQTVLRSSSEAEYRAMADAT 141          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: A0A1U8FRS4_CAPAN (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8FRS4_CAPAN)

HSP 1 Score: 54.3 bits (129), Expect = 5.390e-8
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    9 LRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEY 60
            L L+VY D+D+ A +DSRRS+SG  V+LGD+ I W+S  Q     ++ EAEY
Sbjct:   27 LSLTVYCDSDWGACADSRRSISGYCVLLGDSLIGWKSKKQAVVSLSSAEAEY 78          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: UPI00092F6BC0 (uncharacterized protein LOC109359742 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F6BC0)

HSP 1 Score: 55.5 bits (132), Expect = 6.400e-8
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 LRFVRG-----------SRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEY 60
            LR+++G           S L++  Y+D+D+V+  D+RRSV+G  + LG++ I W+S  QK    ++CEAEY
Sbjct:   16 LRYIKGAPSLGLFYPTDSPLQIKAYSDSDWVSCPDTRRSVTGFCIYLGNSLISWKSKKQKTVARSSCEAEY 86          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: UPI000B8FFA5D (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8FFA5D)

HSP 1 Score: 56.2 bits (134), Expect = 1.360e-7
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEYVSLC 64
            L F +  +  LS YAD+D+    DSR+SV+G  + LG++ I W+S  Q     ++ EAEY S+C
Sbjct:  191 LMFKQSEKFELSAYADSDWAKCVDSRKSVTGFGIFLGNSLISWKSKKQSVVSRSSAEAEYRSMC 254          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: A0A438DI98_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DI98_VITVI)

HSP 1 Score: 56.2 bits (134), Expect = 1.400e-7
Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEY 60
            +R+V+G+  RL+ Y+DAD+   +D+RRS++G  V LGD  I W+S  Q     ++ E+EY
Sbjct:  534 IRYVQGNSTRLAAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEY 593          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: A5BZE3_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BZE3_VITVI)

HSP 1 Score: 56.2 bits (134), Expect = 1.430e-7
Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEY 60
            +R+V+G+  RL+ Y+DAD+   +D+RRS++G  V LGD  I W+S  Q     ++ E+EY
Sbjct: 1965 IRYVQGNSTRLAAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEY 2024          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: A0A1S3XS73_TOBAC (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3XS73_TOBAC)

HSP 1 Score: 55.5 bits (132), Expect = 2.540e-7
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   11 LSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEYVSL 63
            +  Y D+D+ A  DSRRSV+G  V+LGD  I W+S  Q+  F ++ EAEY SL
Sbjct:  231 IKAYCDSDWAACPDSRRSVTGYIVLLGDNPISWKSKKQEIVFLSSAEAEYRSL 283          
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Match: UPI000CE1A1A0 (uncharacterized protein LOC112005083 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1A1A0)

HSP 1 Score: 55.5 bits (132), Expect = 2.590e-7
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKCEFTAACEAEY----VSLCDVS 67
            L F   + L ++ +ADAD+ A  DSRRS++G  V LGD+ + W+S  Q     +  EAEY    V++C+V+
Sbjct:  242 LFFSSNTSLHINAFADADWAACLDSRRSITGFCVFLGDSLVSWKSKKQNTVSRSTAEAEYRSMAVAVCEVT 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15227.3454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000B90799E1.110e-843.75uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A0V0H745_SOLCH3.540e-848.15Putative ovule protein n=1 Tax=Solanum chacoense T... [more]
UPI0006A6B0A55.290e-842.62uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A1U8FRS4_CAPAN5.390e-850.00uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI00092F6BC06.400e-838.03uncharacterized protein LOC109359742 n=1 Tax=Lupin... [more]
UPI000B8FFA5D1.360e-740.63uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A438DI98_VITVI1.400e-741.67Retrovirus-related Pol polyprotein from transposon... [more]
A5BZE3_VITVI1.430e-741.67Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A1S3XS73_TOBAC2.540e-749.06uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI000CE1A1A02.590e-739.44uncharacterized protein LOC112005083 n=1 Tax=Querc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15227contigH-elongata_contig15227:2914..3114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15227.3454.1mRNA_H-elongata_contig15227.3454.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15227 2914..3114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15227.3454.1 ID=prot_H-elongata_contig15227.3454.1|Name=mRNA_H-elongata_contig15227.3454.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
LRFVRGSRLRLSVYADADYVAASDSRRSVSGLAVILGDTAIDWQSSVQKC
EFTAACEAEYVSLCDVS
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