prot_H-elongata_contig151832.3429.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151832.3429.1
Unique Nameprot_H-elongata_contig151832.3429.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: D8LRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU0_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.190e-62
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGL 123
            SVFGKKKPLKEILRENKRTITRAVRDIDREK+NLEKQEKKLV +IKKNAKAGQMGAVK+LAKDLVRTR Y TKFIEFRSHLQGVGLKLETVRSHEAMA AMKDVTKAMVSLNKQV +
Sbjct:    6 SVFGKKKPLKEILRENKRTITRAVRDIDREKANLEKQEKKLVGEIKKNAKAGQMGAVKVLAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMAGAMKDVTKAMVSLNKQVNV 122          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A835Z6L9_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6L9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.920e-53
Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGL 123
            +V GKKKPLKEI+RENKRTI RA+R++DREK+NLEKQEKK+++++KK A A QMGAV++LAKDLVRTR Y TKFIEFRSHLQGV LKLE VRSHEAMASAMKDVTKAMV LNKQV +
Sbjct:    3 NVMGKKKPLKEIMRENKRTINRAIRELDREKTNLEKQEKKIISEMKKAAAANQMGAVRVLAKDLVRTRNYVTKFIEFRSHLQGVALKLEVVRSHEAMASAMKDVTKAMVQLNKQVNV 119          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: W7T515_9STRA (Charged multivesicular body protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T515_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.480e-47
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0
Query:   12 KKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGL 123
            KKPLKEI+RENKR I RA+R++DRE++NLEK EKKL+ DIKK AK  QMGAVK +AKDLVRTR Y TKFIE RSHLQG  LKLETVRSHEAMASAM+ VT AMVS+NKQV +
Sbjct:   15 KKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNV 126          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A8J2SQU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQU1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.470e-44
Identity = 82/117 (70.09%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGL 123
            + +G+K PLKE+LR+NKR I +AVR++DRE++NLEKQE KLVADIKK AK GQMG VKI+AKDLVRTRTY TKFIE RSHL  V LKL+TV+S EAMA AMK VT+AMV +NK V +
Sbjct:    3 NTWGRKVPLKEVLRKNKREINKAVRELDRERANLEKQELKLVADIKKYAKDGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVALKLQTVKSQEAMARAMKSVTEAMVRMNKTVNI 119          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A1E7FZX6_9STRA (Snf7-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZX6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.090e-43
Identity = 80/124 (64.52%), Postives = 97/124 (78.23%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGLETWNYLL 130
            ++ GK KPLKE+LRENKR ITRA+R++DREK+ LE++EKKL  +IKK AKAGQMG VKI+AKDLVRTR Y TKFIE RSHLQG  LKL+TV+SH AMA AMK    AM  +NK V +   N ++
Sbjct:    3 NILGKDKPLKEVLRENKRMITRAIRELDREKTGLEREEKKLTMEIKKCAKAGQMGPVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMAEAMKSTASAMHKMNKAVDVPAINKMM 126          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: F0XW09_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW09_AURAN)

HSP 1 Score: 152 bits (383), Expect = 1.690e-43
Identity = 79/117 (67.52%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGL 123
            + +G+K PLKE+LR+NKR I +A+R++DRE++NLEKQE+KL+ADIKK A  GQMG+VKI+AKDLVRTRTY TKFIE RSHL  V LKL+TV+S EAMASAMK VT+AM+ +NK V +
Sbjct:    3 NTWGRKVPLKEVLRKNKREINKAMRELDRERANLEKQEQKLIADIKKYAGQGQMGSVKIMAKDLVRTRTYITKFIELRSHLGAVSLKLQTVKSQEAMASAMKSVTQAMIKMNKTVNV 119          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A7S3K1A5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1A5_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.790e-43
Identity = 78/119 (65.55%), Postives = 99/119 (83.19%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGLET 125
            + +G++ PLKE+LR+NKR I +A+R++D+E+ NLEKQE+KL+ADI+K AK GQMG VKI+AKDLVRTRTY TKFIE RSHL  V LKL+TV+S EAMASAMK VT AM+ +NK V + T
Sbjct:    3 NAWGRQVPLKEVLRKNKREIQKAIRELDKERGNLEKQEQKLIADIRKFAKEGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVSLKLQTVKSQEAMASAMKSVTTAMIRMNKAVNVPT 121          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A448ZIR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.050e-43
Identity = 80/135 (59.26%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGLETWNYLLKAKEARAAKMD 141
            ++ GK+KPLKE+LRENKR I RA+R++DREK+ LE++EK+L  +IKK AK GQMG V I+AKDLVRTR Y TKFIE RSHLQG  LKL+TV+SH AMA AMK   KAM  +NK V +   N +++  E   AK +
Sbjct:    3 NILGKEKPLKEVLRENKRMINRAIRELDREKNGLEREEKRLTLEIKKAAKEGQMGPVNIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMADAMKSTAKAMHKMNKAVDVPAINKMMQDFERENAKTE 137          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A7R9ZTS9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZTS9_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.580e-42
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGLETWNYLLKAKEARAAKMD 141
            ++ G+ KPLKE+LRENKR I RA+R++DREK+ LE++EK+L  +IKK AK GQMGAVKI+AKDLVRTR Y T+FIE RSHLQG  LKL+TV+SH AMA AM    KAM  +NK + +   N +++  E   AK +
Sbjct:    3 NILGRDKPLKEVLRENKRMINRAIRELDREKTGLEREEKRLTIEIKKAAKEGQMGAVKIMAKDLVRTRQYVTRFIEMRSHLQGCALKLQTVKSHHAMAEAMTSTAKAMHKMNKAIDVPAINKMMQEFEKENAKTE 137          
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Match: A0A7R9Z9D6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z9D6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.840e-40
Identity = 78/135 (57.78%), Postives = 101/135 (74.81%), Query Frame = 0
Query:    7 SVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVADIKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVGLETWNYLLKAKEARAAKMD 141
            +VFGK+K LKE LRENKR I RA+R++DRE++ LE++EK+L  +IKK AK  QMGAV+I+AKDLVRTR Y TKFIE RSHLQG  LKL+TV+S +AM  AMK  TKAM+ +NK V +   N ++   E   A+ +
Sbjct:   26 NVFGKEKTLKEQLRENKRMINRAIRELDRERAALEREEKRLTIEIKKMAKEQQMGAVRIMAKDLVRTRAYITKFIEMRSHLQGCALKLQTVKSQQAMTEAMKSTTKAMMKMNKAVDVPAINKMMAEFERENARSE 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151832.3429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRU0_ECTSI1.190e-6292.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6L9_9STRA2.920e-5378.63Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
W7T515_9STRA4.480e-4775.89Charged multivesicular body protein n=3 Tax=Monodo... [more]
A0A8J2SQU1_9STRA6.470e-4470.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1E7FZX6_9STRA1.090e-4364.52Snf7-domain-containing protein n=1 Tax=Fragilariop... [more]
F0XW09_AURAN1.690e-4367.52Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3K1A5_9STRA4.790e-4365.55Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A448ZIR9_9STRA6.050e-4359.26Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9ZTS9_9STRA1.580e-4257.78Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
A0A7R9Z9D6_9STRA3.840e-4057.78Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..50
NoneNo IPR availablePANTHERPTHR10476:SF4CHARGED MULTIVESICULAR BODY PROTEIN 2Acoord: 8..143
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 8..143
IPR005024Snf7 familyPFAMPF03357Snf7coord: 21..125
e-value: 1.7E-19
score: 70.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151832contigH-elongata_contig151832:121..926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151832.3429.1mRNA_H-elongata_contig151832.3429.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151832 121..926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151832.3429.1 ID=prot_H-elongata_contig151832.3429.1|Name=mRNA_H-elongata_contig151832.3429.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MKAAFASVFGKKKPLKEILRENKRTITRAVRDIDREKSNLEKQEKKLVAD
IKKNAKAGQMGAVKILAKDLVRTRTYTTKFIEFRSHLQGVGLKLETVRSH
EAMASAMKDVTKAMVSLNKQVGLETWNYLLKAKEARAAKMDTQTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam