prot_H-elongata_contig15175.3423.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15175.3423.1
Unique Nameprot_H-elongata_contig15175.3423.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length265
Homology
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 9.090e-118
Identity = 195/266 (73.31%), Postives = 225/266 (84.59%), Query Frame = 0
Query:    1 MCDQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKACPYL 265
            MCDQKGSF+DDEKLRFDFSWSG+L+ EQ A VED+VND I ++LPV+A+VAPL+QAQ I SLR VFGERYPDPVRVLS+G+DVP +L+DPENSAW DVSVEFCGGTHL+NT EAE+F +LEE GIAKGVRRIVAVTRG+A  A + A++FEQQL  AD I D+SLD       VRRL AELD +V+S+K+KNK R RLA LVQKAK +KKKVMEERVGQAV +GK EAEK KE+GG ++VFR DFGCDAKSA KILAEVSKACP L
Sbjct:  656 MCDQKGSFLDDEKLRFDFSWSGSLTAEQVADVEDLVNDKINKNLPVYAFVAPLEQAQRIQSLRGVFGERYPDPVRVLSIGQDVPAMLEDPENSAWSDVSVEFCGGTHLSNTQEAETFVILEEAGIAKGVRRIVAVTRGLALAAVERAKAFEQQLDVADGIEDISLDTT-----VRRLGAELDGAVISVKTKNKLRARLATLVQKAKALKKKVMEERVGQAVTVGKAEAEKTKEAGGTQLVFRADFGCDAKSAVKILAEVSKACPEL 916          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.740e-101
Identity = 171/237 (72.15%), Postives = 197/237 (83.12%), Query Frame = 0
Query:   29 AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKACPYL 265
            A VED+VND I ++LPV+A+VAPL+QAQ I SLR VFGERYPDPVRVLS+G+DVP +L+DPENSAW DVSVEFCGGTHL+NT EAE+F +LEE GIAKGVRRIVAVTRG+A  A + A++FEQQL  AD I D+SLD       VRRL AELD +V+S+K+KNK R RLA LVQKAK +KKKVMEERVGQAV  GK EAEK KE+GG ++VFR DFGCDAKSA KILAEVSKACP L
Sbjct:  518 ADVEDLVNDKINKNLPVYAFVAPLEQAQRIQSLRGVFGERYPDPVRVLSIGQDVPAMLEDPENSAWSDVSVEFCGGTHLSNTQEAETFVILEEAGIAKGVRRIVAVTRGLALAAVERAKAFEQQLDVADGIEDISLDTK-----VRRLGAELDGAVISVKAKNKLRARLATLVQKAKALKKKVMEERVGQAVTAGKAEAEKTKEAGGTQLVFRADFGCDAKSAVKILAEVSKACPEL 749          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK)

HSP 1 Score: 231 bits (590), Expect = 2.670e-66
Identity = 130/263 (49.43%), Postives = 173/263 (65.78%), Query Frame = 0
Query:    2 CDQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKACP 263
            CDQKGS VD E+LRFDF+W+G L PEQ A+VE +VN+ I + LPV+A V+P +QA  I SLR VFGERYPDPVRV+SVG  V  +L DP +  W  +S+EFCGGTHLTNT +A  F L+EE GIAKG+RR++AVTRG A +A D +R+FE +L AA       L+  A     + L+  L+   +S+  KN+ R  L  L  K K  KKK ++   G A+ + + +A++ +E+G  KVV R DFGCD K   K + E+ K  P
Sbjct:  650 CDQKGSAVDAERLRFDFAWNGPLEPEQLARVEAIVNEKIAEQLPVYAEVSPFEQACQIPSLRRVFGERYPDPVRVISVGAPVGELLADPLDPKWNGLSIEFCGGTHLTNTGQAAFFQLMEESGIAKGIRRVIAVTRGAAEEARDRSRAFEAELKAA-----AELEGEALLEACKGLTQALNPLAISVVDKNRLREELGALATKVKAWKKKQLKAMSGMALGLCEEKAKEAREAGARKVVLRVDFGCDGKVGKKCVQEMHKHHP 907          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA)

HSP 1 Score: 230 bits (587), Expect = 7.390e-66
Identity = 129/262 (49.24%), Postives = 176/262 (67.18%), Query Frame = 0
Query:    1 MCDQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKA 261
            +CDQKGSFVDD+KLRFDF+WSG L  +Q A VE +VN+ I+  +PV+A+VAPLD+A  I +LRSVFGERYPDPVRVLSVG++VP +L+DP++ +W ++SVEFCGGTHLTNT +AE+FA++EE GIAKG+RRI+AVTR  A +A  +A +FE+++ A   +   + D L  +   +RL   LDT+ +S   K + R  +A         KKK   E V  A ++G T  E  K +G D+V+     G D K+ T  L     A
Sbjct:  655 LCDQKGSFVDDDKLRFDFAWSGPLPADQIAAVEKIVNETIQAKMPVYAHVAPLDKALKIRALRSVFGERYPDPVRVLSVGQEVPAMLEDPDSDSWSNLSVEFCGGTHLTNTGDAEAFAIMEETGIAKGIRRIIAVTRERAHEAKALAGTFEEEVKALAPL--ATQDPLKLEKETKRLLPVLDTAAISATDKQRIRDIIAGYTVAITAHKKKAANEGVAAAKELGTTAGEAAKAAGKDRVIVVLPDGADNKTITAALTAAKAA 914          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A7S2V5N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 9.970e-66
Identity = 128/264 (48.48%), Postives = 170/264 (64.39%), Query Frame = 0
Query:    1 MCDQKGSFVDDEKLRFDFSWSGALSPEQAQ-VEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKACP 263
            MC+QKGS VD ++LRFDFSW+     E  Q VE +VN+ I+ +LPV A VAPL++A  I SLR VFGERYPDPVRV+SVG+DV  +L+DPEN AW  +S+EFCGGTHL+NT EA+ F LLEEGGIAKG+RR++ VTR  A  A + + +F++++T AD +   +LD        R L+ EL+   +S+  K  +R +L   V++ K  KKK       QA+      A + KE G + VV R DFGC+ K   K L E  K  P
Sbjct:  168 MCEQKGSHVDQDRLRFDFSWNAQPKTEDLQKVEALVNEKIEAALPVFAEVAPLEKAARIHSLRQVFGERYPDPVRVVSVGQDVGPMLEDPENPAWSGLSIEFCGGTHLSNTKEAKYFQLLEEGGIAKGIRRVIGVTREAAVAAKEASEAFKKKITEADKLEGQALDEA-----WRALTQELNQLQISIVDKAGHRAQLDAQVERIKKWKKKAAAGSATQAIGAVNALASEAKEKGQNVVVARLDFGCNGKVGKKALGEFKKVHP 426          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA)

HSP 1 Score: 211 bits (536), Expect = 8.830e-59
Identity = 114/209 (54.55%), Postives = 145/209 (69.38%), Query Frame = 0
Query:    1 MCDQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIK 208
            +CDQKGS VDDEKLRFDF+W+ AL+ E+ A+VE +V + I Q LPVH+Y+APL++A  I SLR VFGERYPDPVRVLSVG +VP +L+DP N AW D SVEFCGGTHL+NT EAE FAL+EE GIAKG+RRI AVT+ MAR A ++A  F   L  A+   +  L+       V+ L+  L    +S   K ++R  L  L+ + K  K
Sbjct:  656 LCDQKGSAVDDEKLRFDFAWNKALTKEELAEVETIVRERISQELPVHSYIAPLEKALHINSLRQVFGERYPDPVRVLSVGHEVPPMLEDPTNPAWQDTSVEFCGGTHLSNTREAERFALIEETGIAKGIRRITAVTKDMARAAEELAEEFAGLLALAEVKPEEELEGE-----VKMLNTRLGPLTISAVEKERFRTALDALLTRVKKFK 859          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: B7G5M3_PHATC (Alanine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5M3_PHATC)

HSP 1 Score: 210 bits (535), Expect = 1.000e-58
Identity = 124/260 (47.69%), Postives = 165/260 (63.46%), Query Frame = 0
Query:    3 DQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKD-VPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSK 260
            DQKGS VD+ KLRFDFSWSG L+PEQ A+VE +  D I  ++PV AYVAPL  AQ I SLR+VFGE+YPDPVRV++V    VP +L +P++S W + SVEFCGGTHLTNT EAE+F LL E GIAKG+RRI A+T G A+ A  +A  FE +LTAA+ +    L++      V++LSAELD   ++   K ++R +LA + ++    KK+ +                    +GG KVV R DFG + K A  ++    K
Sbjct:  645 DQKGSLVDETKLRFDFSWSGQLTPEQLAEVEKLCMDRIVNAVPVDAYVAPLGDAQQISSLRAVFGEKYPDPVRVVAVSDHAVPEMLANPQDSQWNEYSVEFCGGTHLTNTKEAEAFVLLAEEGIAKGIRRITAITTGEAKKAIALANEFESKLTAAEVVQGDDLEST-----VKQLSAELDGLDIAAVKKMQFREQLATMTKQVLAYKKQKL--------------------AGGSKVVMRFDFGVEGKVAKSVMTAFGK 879          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A7S4ME88_9STRA (Alanine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ME88_9STRA)

HSP 1 Score: 207 bits (528), Expect = 9.950e-58
Identity = 124/260 (47.69%), Postives = 165/260 (63.46%), Query Frame = 0
Query:    3 DQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKD-VPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSK 260
            DQKGS VD+ KLRFDFSW+G L P Q A VED++N  I   +P+ ++VAPL+ A+ I SLR+VFGE YPDPVRV+SV  + +P ILQ+P++  W   SVEFCGGTHL+NT EAE F LL+E GIAKGVRRI AVT G A+ A + A  FE +L  A A+    L+A      V++LS EL    +S+  K+ ++  L  L +KA   KK+    R  + V+   + A    E+GG+K+  R DFG D K A  +    +K
Sbjct:  639 DQKGSLVDELKLRFDFSWNGPLKPAQLAAVEDMINSRISAGVPIQSFVAPLEDAKQISSLRAVFGEVYPDPVRVVSVSPEPIPEILQNPQDGQWLQYSVEFCGGTHLSNTKEAEMFVLLKEEGIAKGVRRITAVTGGDAKAAGERADEFEGRLKEAGALPGAELEAG-----VKKLSEELKDLSISVARKDGFKTELGKLTKKAMAWKKEQAAARTKEVVEQLVSAAN---EAGGNKIALRIDFGIDGKVAKSVAQSFAK 890          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A8J9T9Q1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T9Q1_PHATR)

HSP 1 Score: 198 bits (504), Expect = 1.240e-55
Identity = 112/209 (53.59%), Postives = 147/209 (70.33%), Query Frame = 0
Query:    3 DQKGSFVDDEKLRFDFSWSGALSPEQ-AQVEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKD-VPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKK 209
            DQKGS VD+ KLRFDFSWSG L+PEQ A+VE +  D I  ++PV AYVAPL  AQ I SLR+VFGE+YPDPVRV++V    VP +L +P++S W + SVEFCGGTHLTNT EAE+F LL E GIAKG+RRI A+T G A+ A  +A  FE +LTAA+ +    L++      V++LSAELD   ++   K ++R +LA + ++    KK
Sbjct:  449 DQKGSLVDETKLRFDFSWSGQLTPEQLAEVEKLCMDRIVNAVPVDAYVAPLGDAQQISSLRAVFGEKYPDPVRVVAVSDHAVPEMLANPQDSQWNEYSVEFCGGTHLTNTKEAEAFVLLAEEGIAKGIRRITAITTGEAKKAIALANEFESKLTAAEVVQGDDLEST-----VKQLSAELDGLDIAAVKKMQFREQLATMTKQVLAHKK 652          
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL)

HSP 1 Score: 200 bits (508), Expect = 7.180e-55
Identity = 117/262 (44.66%), Postives = 164/262 (62.60%), Query Frame = 0
Query:    1 MCDQKGSFVDDEKLRFDFSWSGALSPEQAQ-VEDVVNDHIKQSLPVHAYVAPLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVEFCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFEQQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAILVQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKSATKILAEVSKA 261
            + DQKGS  D++KLRFDFSW+G + PEQ Q VE  VN  I  + PV A    L+QA+ I SLRSVFGE+YPDPVRV+SVG +V  ++ +P+N  W   S+EFCGGTH+ N++EAE F ++EE GIAKGVRRIVAVTR  AR+A   A +  +++ A  A+ D  LDA      V+    EL  + + +  K      +  L+++ K  +K++ +E+  + +       E+ KE+G   VV R DFG D K  +K+L E +KA
Sbjct:  707 LVDQKGSLCDEQKLRFDFSWNGPVGPEQLQRVEAQVNACIDAAQPVDALPVALEQAKFIYSLRSVFGEQYPDPVRVVSVGNNVSAMVDEPQNKDWAAGSIEFCGGTHIANSAEAERFVIMEESGIAKGVRRIVAVTRSKAREAIANAAALREKVKAVAALPDAELDAA-----VKVFQKELLATPVGVVDKGALGKEVETLIKRVKKYQKQLEKEKEAEVLGKILPAVEEAKENGKGVVVLRLDFGTDGKLGSKLLKEATKA 963          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15175.3423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP9_ECTSI9.090e-11873.31Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L0C8_9PHAE1.740e-10172.15Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A6V2XN65_HETAK2.670e-6649.43Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z4U5_9STRA7.390e-6649.24Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2V5N9_9STRA9.970e-6648.48Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
W7TIB5_9STRA8.830e-5954.55Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
B7G5M3_PHATC1.000e-5847.69Alanine--tRNA ligase n=1 Tax=Phaeodactylum tricorn... [more]
A0A7S4ME88_9STRA9.950e-5847.69Alanine--tRNA ligase n=2 Tax=Odontella aurita TaxI... [more]
A0A8J9T9Q1_PHATR1.240e-5553.59Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S4GJP2_9EUGL7.180e-5544.66Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnasti... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 73..132
e-value: 6.7E-17
score: 72.1
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 73..132
e-value: 3.7E-15
score: 55.7
NoneNo IPR availableGENE3D3.30.54.20coord: 43..113
e-value: 2.2E-29
score: 104.5
NoneNo IPR availableGENE3D3.30.980.10coord: 3..131
e-value: 2.2E-29
score: 104.5
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 2..244
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 2..244
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..145
score: 17.236
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 3..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15175contigH-elongata_contig15175:344..4574 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15175.3423.1mRNA_H-elongata_contig15175.3423.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15175 344..4595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15175.3423.1 ID=prot_H-elongata_contig15175.3423.1|Name=mRNA_H-elongata_contig15175.3423.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
MCDQKGSFVDDEKLRFDFSWSGALSPEQAQVEDVVNDHIKQSLPVHAYVA
PLDQAQSICSLRSVFGERYPDPVRVLSVGKDVPTILQDPENSAWYDVSVE
FCGGTHLTNTSEAESFALLEEGGIAKGVRRIVAVTRGMARDASDMARSFE
QQLTAADAINDLSLDALASKALVRRLSAELDTSVMSLKSKNKYRVRLAIL
VQKAKVIKKKVMEERVGQAVDMGKTEAEKVKESGGDKVVFRKDFGCDAKS
ATKILAEVSKACPYL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012947tRNA_SAD
IPR018165Ala-tRNA-synth_IIc_core
IPR018163Thr/Ala-tRNA-synth_IIc_edit