prot_H-elongata_contig151691.3420.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151691.3420.1
Unique Nameprot_H-elongata_contig151691.3420.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.510e-58
Identity = 93/99 (93.94%), Postives = 98/99 (98.99%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIK 99
            ++ EDAEE+GDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPL+SANM+DVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIK
Sbjct:   50 MIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIK 148
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.200e-49
Identity = 78/103 (75.73%), Postives = 94/103 (91.26%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ +DA+E+ +AQEIPLPNVK+SVL+K+IEFC HY EDPMNEIEKPL+SANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   54 MIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTP 156
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.510e-48
Identity = 78/100 (78.00%), Postives = 90/100 (90.00%), Query Frame = 0 
Query:    4 EDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            E+ EE+ +AQEIPLPNVK+SVL+KVIEFC HY EDPMNEIEKPL+SANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   52 EELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTP 151
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN)

HSP 1 Score: 158 bits (400), Expect = 1.200e-47
Identity = 77/103 (74.76%), Postives = 92/103 (89.32%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ E+A+EE +AQEIPLPNVK+ VL+KVIEFC  Y E+PM+EIEKPL+SANM++VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   24 MIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTP 126
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.330e-47
Identity = 76/103 (73.79%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ E+ + E D QEIPLPNVK+ +L KV+EFC HY E+PMNEIEKPL+S+NM++VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   50 MIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTP 152
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A7S2BMM8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BMM8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.760e-47
Identity = 76/103 (73.79%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ E+ + E D QEIPLPNVK+ +L KV+EFC HY E+PMNEIEKPL+S+NM++VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   93 MIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTP 195
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 7.400e-47
Identity = 79/98 (80.61%), Postives = 87/98 (88.78%), Query Frame = 0 
Query:    7 EEEGD-AQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            E+EGD  QEIPLPNVK+SVL KVIEFC HYKEDPM EIEKPL+S+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   54 EDEGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTP 151
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.420e-46
Identity = 75/99 (75.76%), Postives = 87/99 (87.88%), Query Frame = 0 
Query:    5 DAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            D ++  + QEIPLPNVK +VL+KVIEFC H+KEDPMN+IEKPL+SANM++VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:   43 DDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTP 141
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.780e-46
Identity = 78/103 (75.73%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:    1 VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ ED  EE +AQEIPLPNVK+++LSKVIEF  HYKE+PMNEIEKPL+SANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIK ++P
Sbjct:   36 MIDEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSP 137
[Close]
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.840e-45
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 0 
Query:    1 VVAEDAEEEGD-AQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSANMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKVRAP 103
            ++ E+A+E+ D AQEIPLPNVK+ VLSKVIEFC  Y  DPM EIEKPL+SANM++VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIK + P
Sbjct:  126 MIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTP 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151691.3420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U6_ECTSI1.510e-5893.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9K0_9STRA3.200e-4975.73Skp1 family, dimerization domain-containing protei... [more]
A0A836CN28_9STRA4.510e-4878.00Skp1 family, dimerization domain-containing protei... [more]
F0XYF9_AURAN1.200e-4774.76Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2BM50_9STRA1.330e-4773.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2BMM8_9STRA4.760e-4773.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SQM9_9STRA7.400e-4780.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D5I6_9STRA2.420e-4675.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3HQT9_9STRA2.780e-4675.73Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3JW81_9STRA2.840e-4575.96Hypothetical protein n=3 Tax=Pelagomonadales TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 1..83
e-value: 9.9E-8
score: 41.7
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 8..36
e-value: 1.1E-8
score: 35.1
NoneNo IPR availableGENE3D3.30.710.10coord: 1..106
e-value: 6.1E-35
score: 122.6
NoneNo IPR availablePANTHERPTHR11165:SF120S-PHASE KINASE-ASSOCIATED PROTEIN 1coord: 5..103
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 5..103
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 6..40
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 55..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151691contigH-elongata_contig151691:260..1092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151691.3420.1mRNA_H-elongata_contig151691.3420.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151691 260..1092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151691.3420.1 ID=prot_H-elongata_contig151691.3420.1|Name=mRNA_H-elongata_contig151691.3420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
VVAEDAEEEGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLRSA
NMYDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKV
RAPVRALD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR016073Skp1_comp_POZ
IPR011333SKP1/BTB/POZ_sf
IPR036296SKP1-like_dim_sf