mRNA_H-elongata_contig15165.3417.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: D8LJ40_ECTSI (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ40_ECTSI) HSP 1 Score: 972 bits (2514), Expect = 0.000e+0 Identity = 473/561 (84.31%), Postives = 516/561 (91.98%), Query Frame = 1
Query: 16 MSTVAGKVGGVGIERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEE-YKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNERRTIAA 1695
++ VAG VG GIERIKGTDKEGLLDV R+DRARKGPEIK+ EDQKLKVG+IGGGLAGMIT+MDL+EAGH+VEIFEARPFMGGKV SW+DKDGNHIEMGLHVFFGCYYNFFGIFRRLGIF+S+LRLK H HQF+ + ELGGLDFRMGGIGAP NGLKAFATTGQLGI+DKLANALALGTSPIVKAL NFD AMEDVRALD +TFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQ LFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKH TSRRI+D+KHEVDADGKP VNGLV++GG ++ YKEFD+V+AATDVPGIKKLLPENFRK+EMFDNIYKLDGVPVATVQLRFDGWVTEL+D DK DV SDYS G+APGLDNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTPGDKWMP++T +I A CL+QVLELFPSA ELNCTW+NVVKLG+SLYREGPGLD++RP+QRTP+PNFF+AGSYTYQDYIDSMEGATKSALLCADR+LEDTPALAKA+ ER+ +AA
Sbjct: 49 VAGVAGTVGATGIERIKGTDKEGLLDVNRIDRARKGPEIKLPEDQKLKVGVIGGGLAGMITSMDLAEAGHEVEIFEARPFMGGKVGSWKDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFDSALRLKDHNHQFLKQGGELGGLDFRMGGIGAPINGLKAFATTGQLGIFDKLANALALGTSPIVKALFNFDWAMEDVRALDSMTFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQ---------LFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHHTSRRILDIKHEVDADGKPTHVNGLVVTGGGGGKDQQYKEFDLVIAATDVPGIKKLLPENFRKYEMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPRSTDDIAAVCLKQVLELFPSARELNCTWTNVVKLGQSLYREGPGLDQYRPDQRTPIPNFFMAGSYTYQDYIDSMEGATKSALLCADRVLEDTPALAKAAKERKAVAA 600
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A4D6NXF4_UNDPI (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A4D6NXF4_UNDPI) HSP 1 Score: 969 bits (2506), Expect = 0.000e+0 Identity = 470/566 (83.04%), Postives = 518/566 (91.52%), Query Frame = 1
Query: 1 SGRTKMSTVAGKVGGVGIERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEEYKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNERRTIAAA 1698
+G + ++ VAG VGG GIERIKGTDKEGLLDV R+DRARKGPEIK+ +DQK+K+GIIGGGLAGMITAMDLSEAGH VEIFEARPFMGGKV SW+DKDGNHIEMGLHVFFGCYYNFFGIFRRLGIF+S+LRLK HTHQFVNK ELG LDFRMGGIGAPFNGLKAFATT QLGIYDKLANALALGTSPIVKAL NFDAAMEDVRALD++TFSEWFEGKGGSRGSI R+WDP+AYALGFIDCD+ISARCMLTIFQ LFAIRSEASVLRMLEGSPDDFIHQPILKYL ERGV H TSRRI +++HEVDADGKP VNGLVI+GG + EEY+E+DVV+AATDVPGIKKLLPENFRK++MFDNIYKLDGVPVATVQLRFDGWVTEL+D +KMKDV DY GRAPG+DNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTPGDKWMPKTT EI A CL+QVLELFPSA +LNCTW+NVVK+G+SLYREGPGLD++RP+QRTP+PNFF+AGSYTYQDYIDSMEGATKSALLCADR+LEDTPALAK + +R ++A+
Sbjct: 50 TGVSMVAGVAGTVGGSGIERIKGTDKEGLLDVNRIDRARKGPEIKLPQDQKMKIGIIGGGLAGMITAMDLSEAGHQVEIFEARPFMGGKVGSWKDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFDSALRLKVHTHQFVNKGGELGALDFRMGGIGAPFNGLKAFATTDQLGIYDKLANALALGTSPIVKALFNFDAAMEDVRALDKMTFSEWFEGKGGSRGSISRMWDPVAYALGFIDCDHISARCMLTIFQ---------LFAIRSEASVLRMLEGSPDDFIHQPILKYLAERGVTHQTSRRITEIRHEVDADGKPTHVNGLVIAGGGTE-EEYREYDVVIAATDVPGIKKLLPENFRKYDMFDNIYKLDGVPVATVQLRFDGWVTELNDAEKMKDVAGDYGQGRAPGMDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPKTTDEIAAVCLEQVLELFPSARDLNCTWTNVVKVGQSLYREGPGLDQYRPDQRTPIPNFFMAGSYTYQDYIDSMEGATKSALLCADRVLEDTPALAKLTKDRAAVSAS 605
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A6H5JB95_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB95_9PHAE) HSP 1 Score: 951 bits (2459), Expect = 0.000e+0 Identity = 473/577 (81.98%), Postives = 513/577 (88.91%), Query Frame = 1
Query: 31 GKVGGVGIERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKAC---------------------ELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEE-YKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNERRTIAA 1695
G VGG+GIERIKGTDKEGLLDV R+DRARKGPEIK+ EDQKLKVG+IGGGLAGMIT+MDL+EAGH+VEIFEARPFMGGK DKDGNHIEMGLHVFFGCYYNFFGIFRRLGIF+S+LRLK H HQFVNK ELGGLDFRMGGIGAP NGLKAFATTGQLGI+DKLANALALGTSPIVKAL NFD AMEDVRALD +TFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQA K LFAIRSEASVLRMLEGSPD+FIHQPILKYLGERGVKH TSRRI+D+KHEVDADGKP VNGLV++GG ++ YKEFDVV+AATDVPGIKKLLPENFRK++MFDNIYKLDGVPVATVQLRFDGWVTEL+D DK DV SDYS G+APGLDNLLYTADAEFSCFADLALTSPSS+YYK GEG+LLQCVMTPGDKWMP++T +I AACL+QVLELFPSA ELNCTW+NVVKLG+SLYREGPGLD++RP+QRTP+ NFF+AGSYTYQDYIDSMEGATKSALLCADR+LEDTPALAKA+ ER+ +AA
Sbjct: 51 GTVGGMGIERIKGTDKEGLLDVNRIDRARKGPEIKLPEDQKLKVGVIGGGLAGMITSMDLAEAGHEVEIFEARPFMGGK-----DKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFDSALRLKDHNHQFVNKGTRATLLPCAVLNEIFLKKFKGGELGGLDFRMGGIGAPINGLKAFATTGQLGIFDKLANALALGTSPIVKALFNFDWAMEDVRALDSMTFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQASKRC----LFAIRSEASVLRMLEGSPDEFIHQPILKYLGERGVKHHTSRRILDIKHEVDADGKPTHVNGLVVTGGGGGKDQQYKEFDVVIAATDVPGIKKLLPENFRKYDMFDNIYKLDGVPVATVQLRFDGWVTELNDKDKRNDVASDYSGGKAPGLDNLLYTADAEFSCFADLALTSPSSDYYKPGEGSLLQCVMTPGDKWMPRSTEDIAAACLKQVLELFPSARELNCTWTNVVKLGQSLYREGPGLDQYRPDQRTPISNFFMAGSYTYQDYIDSMEGATKSALLCADRVLEDTPALAKAAKERKAVAA 618
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A836CNI7_9STRA (Zeta-carotene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI7_9STRA) HSP 1 Score: 828 bits (2138), Expect = 2.470e-292 Identity = 410/552 (74.28%), Postives = 461/552 (83.51%), Query Frame = 1
Query: 25 VAGKVGGVGIERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEEYKEFDVVVAATDVPGIKKLLPENFRK-HEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNE 1677
VAG+VG G+E++ G+D EGLLD R+ RA GP +K+ QKLK+ I+G GL GMITAMDLSEAGHDVEIFEAR F+GGKV SW DKDGNHIEMGLHVFFGCYYN FGIFRRLGIF+S+LRLK H H FVN LGGLDFRMGGIGAPFNG+KAF T+ QL + DKLANALAL TSP+VKAL NFDAAM DVRALD ++FSEWFEG+GGSRGSI RLWDPIAYALGFIDCD+ISARCMLTIFQ LFA+RSEASVLRMLEGSP+DFIH PILKYL +R V+ T+RRI D+ H+ DA G+P RV GLVI+GG EE +EFDVVVAATDVPGIKKLLP FR+ + FD IY LDGVPVATVQLRFDGWVTEL+D ++ KDV SDYSAGRAPGLDNLLY+ADAEFSCFADLALTSPSSNYY+ G+G+LLQCVMTPGDKWM +T I ACL+QV LFPSA ELNCTW +VVK+ +SLYRE PG+D+ RP QRTP+PNF+LAGSYTYQDYIDSMEGATKSALLCAD +LEDTP LA +E
Sbjct: 52 VAGQVG-AGVEQVAGSDSEGLLDTSRMQRASNGPGVKVPPSQKLKIAIVGAGLGGMITAMDLSEAGHDVEIFEARRFVGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIFRRLGIFDSALRLKEHEHMFVNTGGVLGGLDFRMGGIGAPFNGVKAFLTSTQLSVGDKLANALALATSPVVKALFNFDAAMVDVRALDAVSFSEWFEGQGGSRGSITRLWDPIAYALGFIDCDHISARCMLTIFQ---------LFAVRSEASVLRMLEGSPEDFIHTPILKYLADRNVQVHTNRRIADITHDTDAQGRPTRVRGLVITGGGGGREEAREFDVVVAATDVPGIKKLLPRAFREGYGFFDRIYNLDGVPVATVQLRFDGWVTELNDAERRKDVASDYSAGRAPGLDNLLYSADAEFSCFADLALTSPSSNYYQAGKGSLLQCVMTPGDKWMGASTEAIAEACLEQVRNLFPSARELNCTWHSVVKVAESLYREAPGMDKNRPTQRTPLPNFYLAGSYTYQDYIDSMEGATKSALLCADVVLEDTPKLAALRDE 593
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A0G4FAC3_VITBC (Zeta-carotene desaturase, chloroplastic/chromoplastic n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FAC3_VITBC) HSP 1 Score: 751 bits (1940), Expect = 4.740e-263 Identity = 370/535 (69.16%), Postives = 443/535 (82.80%), Query Frame = 1
Query: 73 DKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISG--GRADAEEYKEFDVVVAATDVPGIKKLLPENFRK-HEMFDNIYKLDGVPVATVQLRFDGWVTEL--SDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALA 1662
D EGLLDV RL+RA GP+I + +DQ+LK+G++G GLAG++TAMDL++AGH VEI+E RPF+GGKV SW DKDGNHIEMGLHVFFGCYYN FGIF+RLGIFE +LRLKTHTHQFVNK ++G LDFRMGG+GAPFNGLKAFATT QL + DK+ANA+AL TSP+V+ LV+FD AMEDVR LD+I+FSEWF KGGSRGSI+R+WDPIAYALGFIDCD+ISARCMLTIFQ LFA+RSEASVLRMLEGSP +++H+PI +YL RG K T R++ D+ ++ DA G P R+ G+V++G GR +E KEFDVVVAA DVPGI+KLLP +F+ +++F N+ KL+GVPVATVQLRFDGWVTEL S PD+ + V D+S G+APGLDNLLY+ADAEFSCFADLAL SP+ +YYK GEG+LLQCV+TPGDKWMP+ I A L+QV +LFPSA +L CTWSNVVKL +SLYRE PG+D FRP Q+TPV F+LAGSYTYQDYIDSMEGATKS L A+ IL+DTPALA
Sbjct: 4 DAEGLLDVKRLERAATGPQIFLPDDQRLKIGVVGAGLAGLVTAMDLADAGHSVEIYETRPFIGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIFKRLGIFEDALRLKTHTHQFVNKGGDVGALDFRMGGVGAPFNGLKAFATTSQLELGDKVANAIALATSPVVRGLVDFDGAMEDVRNLDDISFSEWFLSKGGSRGSIDRMWDPIAYALGFIDCDHISARCMLTIFQ---------LFAVRSEASVLRMLEGSPHEYLHKPIQQYLEARGAKIFTRRKVKDLLYDTDASGAPTRMRGIVVTGPPGRDRQDETKEFDVVVAAVDVPGIQKLLPPSFKSSYDVFGNVDKLEGVPVATVQLRFDGWVTELDPSHPDR-RVVDKDFSDGKAPGLDNLLYSADAEFSCFADLALASPA-DYYKPGEGSLLQCVLTPGDKWMPQEVDAIANATLKQVYDLFPSARDLKCTWSNVVKLNQSLYREAPGMDPFRPPQKTPVDGFYLAGSYTYQDYIDSMEGATKSGLKAAEAILDDTPALA 527
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: W7UB54_9STRA (Zeta-carotene desaturase, chloroplastic/chromoplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UB54_9STRA) HSP 1 Score: 752 bits (1941), Expect = 3.270e-262 Identity = 383/570 (67.19%), Postives = 454/570 (79.65%), Query Frame = 1
Query: 52 IERIKGTDKEGLLDVGRLDRARKGP----EIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDAD-GKPIRVNGLVISGGRADAEEYKE---------------FDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPAL-AKASNERRTIAAA 1698
+E+++G+DKE LLD+ LDRA GP +K + ++L+VGIIGGGL G+ITAMDLSEAGH+VEIFEAR F GGKV SW DKDGNHIEMGLHVFFGCYYN FGI +RLG+FESSLRLK HTH F+NK +G LDFR GGIGAP NGLKAFATT QL I DK+ANA+AL TSP+VKAL +FDAAMEDVRALD I+FSEWF KGGSRGS+ R+WDPIAYALGFIDCD+ISARCMLTIFQ LFA+RSEASVLRM EGSP+ ++H+PIL YL RGV + RI D+ ++ DA G P RV GLV+SG +A+ E+ KE FD VVAA DVPGI+KLLPE+FRK + FDNIY+L+ VPV TVQLRF+GWVTEL+DP +MK++ D+S GRAPGLDNLLY+ADAEFSCFADLALTSP+ YYK+GEG+LLQCV+TPGDKWMP +T +I A L+QVL+LFPSA L CTW+NVVKLG+SLYRE PG+D +RP+Q++PV NF+LAGSYTYQDYIDSMEGATKS LLCAD+IL D + A+AS++ I A
Sbjct: 57 VEQVRGSDKEKLLDLSVLDRAMSGPPANLRVKDTSTERLRVGIIGGGLGGLITAMDLSEAGHEVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGVFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPVNGLKAFATTSQLEIGDKIANAVALATSPVVKALFDFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDHISARCMLTIFQ---------LFAVRSEASVLRMCEGSPNTYLHEPILAYLKARGVTLHLNSRIQDLVYDTDASTGAPSRVKGLVLSG-KANTEDGKEAGAAGGVGAAGEQRLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYRLEAVPVTTVQLRFNGWVTELNDPVRMKEINGDFSNGRAPGLDNLLYSADAEFSCFADLALTSPAE-YYKEGEGSLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADQILRDAKTIKARASSKEDMIKEA 615
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A7S0VWE6_9CRYP (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VWE6_9CRYP) HSP 1 Score: 732 bits (1890), Expect = 1.320e-254 Identity = 372/567 (65.61%), Postives = 440/567 (77.60%), Query Frame = 1
Query: 19 STVAGKVGGVGIERIK----GTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEEYKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASE--LNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALA---KASNERRTIA 1692
+T A + G VG ++ GTD+ LLD A +GP IK+ +KLK+GI+GGGLAGM+TAMDL++AGH EIFE+R F GGK SW DKDGNHIEMGLHVFFGCYYN FGI R+G F+ S+RLK H H FVNK ++G LDFRMGGIGAPFNGLKAFATT QLG+YDKL NA+ LGTSPIV+ALV+FD ME VR LD+ITFSEWF GGSRGSIER+WDPIAYALGFIDCD+ISARCMLTIFQ LFAIRSEASVLRM EGSP+ ++H+PI+KYL ER VK + + +++++ H DADGKP V G+ + +A E K+FDV+V A DVPGIKKLLPE+FRKH+MFD IY L GVPVATVQLRFDGWVTEL D +K+VKS++S G+APGLDNLLY+ADAEFSCFADLALTSP+ YYK GEG+LLQCV+TP D++M E+ +QV ELFPSA E L TWSNVVKL +SLYRE PG+D+FRP+QRT +PNF+L+GSYTYQDYIDSMEGATKS LL AD+IL DT LA K +ER +A
Sbjct: 58 ATRAQRAGAVGERKLGDSVIGTDESRLLDDSLRGDALRGPSIKVDPSKKLKIGIVGGGLAGMVTAMDLADAGHSCEIFESRNFAGGKAGSWVDKDGNHIEMGLHVFFGCYYNLFGILERVGTFDESMRLKDHLHTFVNKGGDIGALDFRMGGIGAPFNGLKAFATTEQLGVYDKLMNAVRLGTSPIVRALVDFDGGMEMVRDLDDITFSEWFLRFGGSRGSIERMWDPIAYALGFIDCDHISARCMLTIFQ---------LFAIRSEASVLRMCEGSPNTYVHEPIVKYLKERDVKINLNSKVVEIMHTCDADGKPSEVQGISVEQDGGEAVE-KKFDVLVCAQDVPGIKKLLPESFRKHDMFDKIYTLVGVPVATVQLRFDGWVTELEDMAALKNVKSEFSDGKAPGLDNLLYSADAEFSCFADLALTSPAE-YYKPGEGSLLQCVLTPADRFMAMDPEEVARITAEQVYELFPSAKEQGLKVTWSNVVKLQQSLYREAPGMDKFRPDQRTVIPNFYLSGSYTYQDYIDSMEGATKSGLLTADKILSDTDYLAANYKGLSERAAVA 613
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A8J5XB03_DIALT (Zeta-carotene desaturase, chloroplastic/chromoplastic n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XB03_DIALT) HSP 1 Score: 723 bits (1867), Expect = 1.620e-251 Identity = 361/555 (65.05%), Postives = 435/555 (78.38%), Query Frame = 1
Query: 52 IERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALG---TSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEEYKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKM--------KDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASE--LNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNE 1677
+ER + DK+ LLD +RA +GP ++ + ++LKVGI+G GL GM+TAMDLSEAG+DVE+FEAR F+GGKV+SW DKDGNHIEMGLHVFFGCYYN FGI +R+G FE LRLK H H FVNK +G LDFRMGGIGAP NGLKAFAT+ QL I DK+ANALALG + PIV+ALV+FD M+ VRALD++TFSEWFEG GGSRGSI+RLWDPIAYALGFIDCD+ISARCMLTIFQ LFA+RSEASVLRM EGSPD ++H+PI+KYL +RGVK + R++D+ H+VDA+G P RV+G+ + G D + FDV +AATDVPGIK LLP+NFRK + FD +Y+L+GVPVATVQLRFDGWVTEL+D D+ KDV SD + GRAPG+DNLLY+ADA+FSCFADLALTSP+ +YYK GEG+LLQCV+TP DK+M E+ L+QV LFPSA L CTWSNVVKL +SLY E PG+DRFRP Q+TP+PNFF+AGS+TYQDYIDSMEGATKS L CA+ +L ALA ++E
Sbjct: 38 LERTQLGDKDRLLDTSLTERALRGPTVRAKDGRRLKVGIVGAGLGGMVTAMDLSEAGYDVEMFEARRFVGGKVSSWLDKDGNHIEMGLHVFFGCYYNLFGIMKRVGAFEPGLRLKDHRHIFVNKGGSIGELDFRMGGIGAPLNGLKAFATSAQLDIGDKIANALALGNPISCPIVQALVDFDGGMDRVRALDDVTFSEWFEGSGGSRGSIKRLWDPIAYALGFIDCDHISARCMLTIFQ---------LFAVRSEASVLRMCEGSPDTYLHKPIVKYLTDRGVKINLKSRVLDILHDVDANGAPTRVHGICVVDGN-DVQSEHRFDVTIAATDVPGIKGLLPDNFRKLDFFDKVYQLEGVPVATVQLRFDGWVTELADMDRWGMTSRGAPKDVGSDRADGRAPGIDNLLYSADADFSCFADLALTSPA-DYYKPGEGSLLQCVLTPADKYMAMDAQEVADRTLEQVYALFPSAKAQGLKCTWSNVVKLAESLYNEKPGMDRFRPSQQTPIPNFFMAGSFTYQDYIDSMEGATKSGLACAEAVLSRADALAAMADE 581
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: A0A0K6SAL9_9ALVE (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Chromera velia TaxID=505693 RepID=A0A0K6SAL9_9ALVE) HSP 1 Score: 715 bits (1846), Expect = 2.110e-248 Identity = 354/545 (64.95%), Postives = 425/545 (77.98%), Query Frame = 1
Query: 73 DKEGLLDVGRLDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISG--GRADAEEYKEFDVVVAATDVPGIKKLLPENFRKH-EMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASELNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNERRTIAAA 1698
D + LLD R RA KGP K+ ++KLK+ I+G GLAG+ AMDLSEAGH+V IFEARPF+GGKV SW+DKDGNH+EMGLHVFFGCYYN FGIF+RLGIF+ +LRLK HTH FVN+ L GLDFR+G IGAP NGL AF T QL YDK N +AL SP+V+ LV+FD AME++R LD I+F++WF +GGSRGSIERLW+PIAYALGFIDCDN+SARCMLTIFQ LFA+RSEAS+LRMLEGSP ++H PI KY+ ERG + T RR++D ++ D GKP +V GLV++G G +E +EFD V+AATDVPGIK LLPE+F++H + N +L GVPVATVQLRFDGWVTEL+D KMKDV D S G+APG+DNLLY+ADAEFSCFADLALTSP+ +YYK+G+G+LLQCV+TPGDKWM K T +I A L+QV LFPS+ +LNCTW NVVKL +SLYRE PG DRFRP QRT +P F++AGSYTYQDYIDSMEGATKS L AD ILEDTP L++ +A+A
Sbjct: 50 DSDKLLDRSRQSRAAKGPNQKVKPEEKLKIAIVGAGLAGLTAAMDLSEAGHEVTIFEARPFIGGKVGSWEDKDGNHVEMGLHVFFGCYYNLFGIFQRLGIFDQALRLKEHTHTFVNEGGRLAGLDFRLGNIGAPINGLNAFFQTQQLEPYDKFRNTIALALSPVVRGLVDFDGAMENIRDLDGISFTDWFLSRGGSRGSIERLWNPIAYALGFIDCDNMSARCMLTIFQ---------LFAVRSEASMLRMLEGSPHVWLHAPIQKYIEERGGQVLTRRRVLDFIYDQDESGKPTKVRGLVVTGDPGAGRQDERREFDAVLAATDVPGIKALLPESFKRHYQELANCMRLVGVPVATVQLRFDGWVTELNDEVKMKDVGGDKSDGKAPGIDNLLYSADAEFSCFADLALTSPA-DYYKEGQGSLLQCVLTPGDKWMGKGTDDIAKATLEQVHRLFPSSKKLNCTWWNVVKLNESLYREEPGADRFRPPQRTSLPGFYMAGSYTYQDYIDSMEGATKSGLQAADAILEDTPLLSRTRRREPALASA 584
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Match: L1JLR2_GUITC (Zeta-carotene desaturase, chloroplastic/chromoplastic n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JLR2_GUITC) HSP 1 Score: 710 bits (1832), Expect = 2.940e-247 Identity = 350/533 (65.67%), Postives = 420/533 (78.80%), Query Frame = 1
Query: 103 LDRARKGPEIKISEDQKLKVGIIGGGLAGMITAMDLSEAGHDVEIFEARPFMGGKVASWQDKDGNHIEMGLHVFFGCYYNFFGIFRRLGIFESSLRLKTHTHQFVNKACELGGLDFRMGGIGAPFNGLKAFATTGQLGIYDKLANALALGTSPIVKALVNFDAAMEDVRALDEITFSEWFEGKGGSRGSIERLWDPIAYALGFIDCDNISARCMLTIFQARKEGSYAQLFAIRSEASVLRMLEGSPDDFIHQPILKYLGERGVKHSTSRRIIDMKHEVDADGKPIRVNGLVISGGRADAEEYKEFDVVVAATDVPGIKKLLPENFRKHEMFDNIYKLDGVPVATVQLRFDGWVTELSDPDKMKDVKSDYSAGRAPGLDNLLYTADAEFSCFADLALTSPSSNYYKKGEGTLLQCVMTPGDKWMPKTTGEITAACLQQVLELFPSASE--LNCTWSNVVKLGKSLYREGPGLDRFRPEQRTPVPNFFLAGSYTYQDYIDSMEGATKSALLCADRILEDTPALAKASNERRTIAA 1695
+ +A +GP ++ E++KLK+GI+G GLAGM+TAMDL +AGH+VEIFEAR F+GGKV SW DKDGNHIEMGLHVFFGCYYN FGI +R+G F+ SLRLK H H FVN+ G LDFRMGGIGAPFNGLKAFATT QLG+YDKL NA+ LGTSPIV+ALV+FD M+ VR+LD+I+FSEWF GGSRGSI+R+WDPIAYALGFIDCDNISARCMLTIFQ LFA+RSEASVLRM EGSP+ FI PI+ YL ERGVK + + R+ D+ HEVDA GKP V G+ ++ + + K FDVVV A DVPGIKKLLPE+FRKH+MFD IYKL+GVPVATVQLRFDGW+TE+ D + MK + D S G+APG+DNLLY+AD EFSCFADLALTSP+ YYK+GEG+LLQCV+TP D++M E+ +Q +LFPSA E L CTWSNVVKL +SLYRE PG+D+FRP Q T +PNFFL+GSYTYQDYIDSMEGATKS LLCA+ +++ T +L + + A
Sbjct: 1 MQKAFQGPSVRFPEEKKLKIGIVGSGLAGMVTAMDLVDAGHEVEIFEARNFVGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGILQRVGTFDKSLRLKEHRHIFVNEGGWTGELDFRMGGIGAPFNGLKAFATTEQLGLYDKLMNAVRLGTSPIVRALVDFDGGMDMVRSLDDISFSEWFLRLGGSRGSIKRMWDPIAYALGFIDCDNISARCMLTIFQ---------LFAVRSEASVLRMCEGSPNTFISGPIVDYLKERGVKFNLNSRVEDIMHEVDAQGKPTFVKGIEVALDGGEPVK-KNFDVVVCAQDVPGIKKLLPESFRKHDMFDRIYKLEGVPVATVQLRFDGWITEMQDKEAMKKINEDLSDGKAPGIDNLLYSADVEFSCFADLALTSPAE-YYKEGEGSLLQCVLTPADRFMSMPPEEVARITCEQAYKLFPSAREQGLKCTWSNVVKLRESLYREAPGMDKFRPAQNTVIPNFFLSGSYTYQDYIDSMEGATKSGLLCAEEVIKATESLVSLRDSKMKATA 522 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15165.3417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15165.3417.1 >prot_H-elongata_contig15165.3417.1 ID=prot_H-elongata_contig15165.3417.1|Name=mRNA_H-elongata_contig15165.3417.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=563bp MSTVAGKVGGVGIERIKGTDKEGLLDVGRLDRARKGPEIKISEDQKLKVGback to top mRNA from alignment at H-elongata_contig15165:1731..7636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15165.3417.1 ID=mRNA_H-elongata_contig15165.3417.1|Name=mRNA_H-elongata_contig15165.3417.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5906bp|location=Sequence derived from alignment at H-elongata_contig15165:1731..7636- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15165:1731..7636- >mRNA_H-elongata_contig15165.3417.1 ID=mRNA_H-elongata_contig15165.3417.1|Name=mRNA_H-elongata_contig15165.3417.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3378bp|location=Sequence derived from alignment at H-elongata_contig15165:1731..7636- (Himanthalia elongata Himel1 dioecious)back to top |