prot_H-elongata_contig151599.3414.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151599.3414.1
Unique Nameprot_H-elongata_contig151599.3414.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length41
Homology
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.430e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQ+TDSLIQ
Sbjct:  221 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 260          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQ+TDSLIQ
Sbjct: 1337 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1376          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQ+TDSLIQ
Sbjct: 1317 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1356          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARAVLQRSQILVMDEATANIDQ+TDSLIQ
Sbjct: 1286 LSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1325          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.300e-13
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARAVLQR+QILVMDEATANIDQ+TDSLIQ
Sbjct: 1236 LSVGQRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQ 1275          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-10
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQLLCLARA+LQRS++L+MDEATANID  TDSLIQ
Sbjct: 1667 LSVGQRQLLCLARAILQRSKLLLMDEATANIDTGTDSLIQ 1706          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: UPI00142558AC (multidrug resistance-associated protein 4-like isoform X1 n=4 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142558AC)

HSP 1 Score: 62.8 bits (151), Expect = 2.220e-10
Identity = 27/38 (71.05%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    3 VGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            VGQRQL+CLARA+L+++++L++DEATAN+DQYTD+LIQ
Sbjct: 1223 VGQRQLICLARAILRQNRVLILDEATANVDQYTDTLIQ 1260          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: N6UP16_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UP16_DENPD)

HSP 1 Score: 60.5 bits (145), Expect = 2.730e-10
Identity = 27/37 (72.97%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    4 GQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            GQRQL+CLARA+++ ++IL+MDEATAN+DQ+TDSLIQ
Sbjct:   33 GQRQLICLARAIVRNNKILIMDEATANVDQHTDSLIQ 69          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: A0A1Y1MSU2_PHOPY (ABC transporter domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MSU2_PHOPY)

HSP 1 Score: 58.9 bits (141), Expect = 3.380e-10
Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQL+CLARA+L+ ++IL+MDEATANID  TD+LIQ
Sbjct:   51 VSVGQRQLICLARAILRNNKILIMDEATANIDLETDNLIQ 90          
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Match: A0A6P6YL70_DERPT (multidrug resistance-associated protein 4-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YL70_DERPT)

HSP 1 Score: 62.0 bits (149), Expect = 4.150e-10
Identity = 29/40 (72.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    1 IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQ 40
            + VGQRQL+CLARA+L+R++ILV+DEATAN+D +TDSLIQ
Sbjct: 1189 LSVGQRQLICLARALLRRNKILVLDEATANVDHHTDSLIQ 1228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151599.3414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW5_ECTSI1.430e-1392.50ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5JDN6_9PHAE1.680e-1392.50ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSW4_ECTSI1.680e-1392.50Multidrug resistance-associated protein-like prote... [more]
D8LSW3_ECTSI1.680e-1392.50Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE4.300e-1390.00ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YMC7_9STRA1.190e-1080.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00142558AC2.220e-1071.05multidrug resistance-associated protein 4-like iso... [more]
N6UP16_DENPD2.730e-1072.97ABC transporter domain-containing protein (Fragmen... [more]
A0A1Y1MSU2_PHOPY3.380e-1070.00ABC transporter domain-containing protein (Fragmen... [more]
A0A6P6YL70_DERPT4.150e-1072.50multidrug resistance-associated protein 4-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..41
e-value: 5.6E-11
score: 44.4
NoneNo IPR availablePANTHERPTHR24223:SF262coord: 3..40
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 3..40
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 4..29
e-value: 1.8E-6
score: 28.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151599contigH-elongata_contig151599:1150..1272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151599.3414.1mRNA_H-elongata_contig151599.3414.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151599 1150..1272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151599.3414.1 ID=prot_H-elongata_contig151599.3414.1|Name=mRNA_H-elongata_contig151599.3414.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=41bp
IQVGQRQLLCLARAVLQRSQILVMDEATANIDQYTDSLIQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase