mRNA_H-elongata_contig151290.3400.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: D8LLE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE8_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.690e-34 Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTGYFDEEIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
YTCPLVSGYA MPDRKG VSGF+VAGFGAG AVF+ VAT VNP + PDP TGY+ EE+A RVP MY+ILG YL LG+ GSW+++ P
Sbjct: 119 YTCPLVSGYALMPDRKGTVSGFVVAGFGAGAAVFDAVATAVVNPSNTPPDPATGYYGEEVAGRVPSMYMILGSCYLTLGLFGSWMIANPP 208
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: A0A6H5KJW3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW3_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 9.630e-23 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTGYFDEEIAK 186
YTCPLVSGYA MPDRKG VSGF+VAGFGAG AVF+ VAT VNP + PDP TGY+ E K
Sbjct: 87 YTCPLVSGYALMPDRKGTVSGFVVAGFGAGAAVFDAVATAVVNPSNTPPDPATGYYGEAREK 148
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: A0A0G4GAZ5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GAZ5_VITBC) HSP 1 Score: 86.7 bits (213), Expect = 5.840e-18 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPD--------PMTGYF-DEEIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
YT PLV WMP++KG++SG I AGFGAG VFN V T++VNP+DV PD P YF D+ + RVP ++ +L YLV+ ++G L P
Sbjct: 128 YTSPLVCALKWMPNKKGLISGIITAGFGAGALVFNPVQTMFVNPEDVRPDAAPYAETNPGELYFSDKALLNRVPNLFTLLASCYLVVQLIGCAFLENPP 226
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: A0A7S4DPI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DPI3_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.560e-17 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTGYFDEEIAKRVPGMYLILGMSYLVLGMLGSWLL-SPSP 270
Y P+ GY W+P RKG+VSG +VAGFG G A FN+V + NP+ PDP YF+ ++A RVP M+ LG Y ++ +G+ L+ P+P
Sbjct: 155 YMNPIACGYRWLPKRKGLVSGIVVAGFGLGGAFFNLVGAMICNPNQEQPDP---YFEADVANRVPTMFATLGGMYFLMTTVGALLIRDPTP 242
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: A0A7S4DKP8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKP8_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 1.660e-17 Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTG----YFDEEIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
Y CPL G+ WMP KG+VSGFIV+GFG G VFN VAT NP+D + + Y+ ++ RVP M LG Y VL +LGS +L P
Sbjct: 126 YPCPLSCGFQWMPRHKGLVSGFIVSGFGGGAFVFNQVATRLANPEDATASEVGADGRLYYGPDVTDRVPAMLRALGGCYFVLVLLGSLVLRDPP 219
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: UPI001F0CF206 (oxalate:formate antiporter-like n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0CF206) HSP 1 Score: 84.0 bits (206), Expect = 5.690e-17 Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTGYFDEEIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
Y PL +G W P RKG+V+GFIV G+G G VFN V T ++NP ++SP+P ++ + I RVP ++++L + Y+++ ++G LL P
Sbjct: 126 YVAPLAAGMKWFPKRKGLVNGFIVGGYGLGALVFNYVQTSYLNPLNLSPNPDGYFYAKSILSRVPNLFILLLVIYIIIQIIGCCLLFTPP 215
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: UPI000C6E8360 (uncharacterized protein LOC111628560 n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E8360) HSP 1 Score: 83.2 bits (204), Expect = 1.010e-16 Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDPMTGYF-DEEIAKRVPGMYLILGMSYLVLGMLGSWLL 258
Y PL G W P+RKG+V+G +V+GFG G +FN V T ++NP ++ PD GYF D+EI RVP ++L+LG Y +L ++G LL
Sbjct: 133 YIAPLALGMKWFPNRKGLVNGIVVSGFGLGALIFNQVQTTYLNPKNLVPDK-NGYFEDDEILDRVPTVFLLLGGIYFILQIIGVILL 218
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: A0A8J9Z0X0_BRALA (SLC16A14 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z0X0_BRALA) HSP 1 Score: 83.2 bits (204), Expect = 1.050e-16 Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPD------PMTGYFDE-EIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
Y PL WMP+RKG+V+G ++AGFG G+ +F+ V T ++NP+++SPD P + YFD+ EI ++P +L+LG SY + +LG+ +++ P
Sbjct: 127 YAPPLACAMKWMPERKGLVNGLVLAGFGGGSFIFDQVQTAYLNPNNLSPDLEDPDDPSSKYFDDKEILDKIPVCFLLLGGSYAAIQLLGALMIADPP 223
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: UPI001603C4AC (oxalate:formate antiporter-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603C4AC) HSP 1 Score: 82.0 bits (201), Expect = 2.130e-16 Identity = 39/97 (40.21%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPD------PMTGYFD-EEIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
YT PL WMP+RKG+V G ++AG G G+ +F+ V T ++NP+++SPD P + YFD +EI +VP +L+LG +Y + +LG+ +++ P
Sbjct: 127 YTAPLACAMKWMPERKGLVKGLVLAGLGGGSFIFDQVQTAYLNPNNLSPDVEDPEDPSSKYFDNKEILDKVPVCFLMLGGTYAAIQLLGALMIADPP 223
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Match: C3ZEC5_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZEC5_BRAFL) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-16 Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPD------PMTGYFDE-EIAKRVPGMYLILGMSYLVLGMLGSWLLSPSP 270
Y PL WMP+RKG+V+G ++AGFG G+ +F+ V T ++NP+++SPD P + YFD+ EI +VP +L+LG +Y + +LG+ +++ P
Sbjct: 127 YAPPLACAMKWMPERKGLVNGLVLAGFGGGSFIFDQVQTAYLNPNNLSPDVEDPDDPSSKYFDDKEILDKVPVCFLLLGGTYAAVQLLGALMIADPP 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151290.3400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig151290.3400.1 >prot_H-elongata_contig151290.3400.1 ID=prot_H-elongata_contig151290.3400.1|Name=mRNA_H-elongata_contig151290.3400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp YTCPLVSGYAWMPDRKGMVSGFIVAGFGAGTAVFNVVATLWVNPDDVSPDback to top mRNA from alignment at H-elongata_contig151290:204..706+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig151290.3400.1 ID=mRNA_H-elongata_contig151290.3400.1|Name=mRNA_H-elongata_contig151290.3400.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=503bp|location=Sequence derived from alignment at H-elongata_contig151290:204..706+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig151290:204..706+ >mRNA_H-elongata_contig151290.3400.1 ID=mRNA_H-elongata_contig151290.3400.1|Name=mRNA_H-elongata_contig151290.3400.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=540bp|location=Sequence derived from alignment at H-elongata_contig151290:204..706+ (Himanthalia elongata Himel1 dioecious)back to top |