prot_H-elongata_contig150987.3386.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150987.3386.1
Unique Nameprot_H-elongata_contig150987.3386.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
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BLAST of mRNA_H-elongata_contig150987.3386.1 vs. uniprot
Match: A0A6H5KMQ7_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMQ7_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.080e-33
Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 0 
Query:    4 GLAINWLACVSIHALVRELPTAQLWCCCFNHYLFRYMLFISCPWIRIHPPPAEDIERLMNREKVCVLMNHTSFFDSIIFVATIPANVIWRYKALVKSGLF 103
            GL I+W  CV I  ++ +   AQ  CC ++HY+FR  +  SCPWIR+  PP E++ RL+NRE+VCVLMNHTSF DS++FVAT P+N+IWRY+ L+KS LF
Sbjct:   21 GLIIDWAGCVVITTILPD-GQAQRRCCQWSHYVFRCFMLSSCPWIRVSRPPVEEVTRLLNRERVCVLMNHTSFGDSVMFVATTPSNIIWRYRTLMKSTLF 119
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BLAST of mRNA_H-elongata_contig150987.3386.1 vs. uniprot
Match: A0A835Z6S5_9STRA (Acyltransferase-like protein, copy 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.570e-22
Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:    7 INWLACVSIHALVR-ELPTAQLWCCCFNHYLFRYMLFISCPWIRIHPPPAEDIERLMNREKVCVLMNHTSFFDSIIFVATIPANVIWRYKALVKSGLFKV 105
            + W  C+ +  +V   L   +   C   HY FRYM+ + CPWIR+  PPAE+  R++ R++V V +NHTSF DS++FVA +P +V++RY+ L+K  L ++
Sbjct:   24 LTWAGCMVLRYIVPGTLQQKEARVCTLCHYTFRYMIMLPCPWIRLKVPPAEEWRRILGRDRVFVALNHTSFMDSVLFVACVPGDVLYRYRTLMKKELLEL 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150987.3386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMQ7_9PHAE2.080e-3356.00PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z6S5_9STRA3.570e-2241.00Acyltransferase-like protein, copy 2 n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..111
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150987contigH-elongata_contig150987:990..1325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150987.3386.1mRNA_H-elongata_contig150987.3386.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150987 990..1346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150987.3386.1 ID=prot_H-elongata_contig150987.3386.1|Name=mRNA_H-elongata_contig150987.3386.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
MMGGLAINWLACVSIHALVRELPTAQLWCCCFNHYLFRYMLFISCPWIRI
HPPPAEDIERLMNREKVCVLMNHTSFFDSIIFVATIPANVIWRYKALVKS
GLFKVKNSVRS*
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