prot_H-elongata_contig150772.3382.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150772.3382.1
Unique Nameprot_H-elongata_contig150772.3382.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A835YSZ4_9STRA (Ribonucleoside-diphosphate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.390e-43
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            MS K+FIHASPTLFHAGT+HPQLSSCFLL + EDSIVGIYDTLK+CA ISK AGGIGLSVH IRA+G+YI+GTKG SNGLVPMLRVFDATA
Sbjct:  193 MSRKFFIHASPTLFHAGTAHPQLSSCFLLTMTEDSIVGIYDTLKRCAQISKGAGGIGLSVHDIRAKGTYIKGTKGTSNGLVPMLRVFDATA 283          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A7S0GQ21_9EUKA (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GQ21_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 1.050e-42
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            MS K F+HASPTLFHAGT  PQLSSCFLLPVK DSI GIYDTLK CA+ISKSAGGIGLSV +IRA+GSYIRGT G SNGLVPMLRVFDATA
Sbjct:  245 MSSKAFLHASPTLFHAGTRTPQLSSCFLLPVKSDSIQGIYDTLKSCAAISKSAGGIGLSVQNIRAKGSYIRGTNGVSNGLVPMLRVFDATA 335          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: K8Z7A2_NANGC (Ribonucleoside-diphosphate reductase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7A2_NANGC)

HSP 1 Score: 155 bits (391), Expect = 6.820e-42
Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            MS KWFIHASPTLFHAGT  PQ+SSCFLL ++ DSIVGIYDTLKQCA ISK+AGGIGLSVH+IRA G+YI+GTKG SNGLVPMLRVFD TA
Sbjct:  322 MSNKWFIHASPTLFHAGTRFPQMSSCFLLAMQADSIVGIYDTLKQCAVISKAAGGIGLSVHNIRAHGAYIKGTKGTSNGLVPMLRVFDVTA 412          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A0A9URS9_ARUDO (Ribonucleoside-diphosphate reductase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9URS9_ARUDO)

HSP 1 Score: 143 bits (361), Expect = 7.740e-42
Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    2 SEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            S++WF HASPTLF+AGT  PQLSSCFL+ +K+DSI GIYDTLK+CA ISKSAGGIG+SVH+IRA GSYIRGT G SNG+VPMLRVF+ TA
Sbjct:   25 SQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 114          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A6J4JGJ0_9BACT (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=uncultured Adhaeribacter sp. TaxID=448109 RepID=A0A6J4JGJ0_9BACT)

HSP 1 Score: 145 bits (366), Expect = 1.170e-41
Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            MSEKWF HA+PTLF+AG+  PQLSSCFLL +KEDSI GIYDTLK CA IS+SAGGIGLS HSIRA GSYI+GT G SNGLVPML+VF+ TA
Sbjct:   90 MSEKWFTHATPTLFNAGSPKPQLSSCFLLTMKEDSIAGIYDTLKNCAMISQSAGGIGLSAHSIRATGSYIKGTNGTSNGLVPMLKVFNDTA 180          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: H0YCY7_HUMAN (Ribonucleoside-diphosphate reductase (Fragment) n=3 Tax=Hominidae TaxID=9604 RepID=H0YCY7_HUMAN)

HSP 1 Score: 140 bits (353), Expect = 3.580e-41
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            +SE+WF HASPTLF+AGT+ PQLSSCFLL +K+DSI GIYDTLKQCA ISKSAGGIG++V  IRA GSYI GT G SNGLVPMLRV++ TA
Sbjct:    6 LSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTA 96          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A1Y3BMA8_EURMA (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BMA8_EURMA)

HSP 1 Score: 143 bits (361), Expect = 8.880e-41
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            +SE WF HASPTLF+AGT  PQLSSCFLL + +DSI GIYDTLKQCA ISKSAGGIGL+VH IR+ GSYI GT GFSNGL+PMLRV++ TA
Sbjct:   24 ISENWFTHASPTLFNAGTKRPQLSSCFLLTMSDDSIEGIYDTLKQCAIISKSAGGIGLNVHCIRSSGSYISGTNGFSNGLIPMLRVYNHTA 114          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: S7V4S9_9BACT (Ribonucleoside-diphosphate reductase n=1 Tax=Cyclobacterium qasimii M12-11B TaxID=641524 RepID=S7V4S9_9BACT)

HSP 1 Score: 147 bits (370), Expect = 1.220e-40
Identity = 69/91 (75.82%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            +S+KWF HA+PTLF+AGT  PQLSSCFLL +K+DSI GIYDTLKQCA IS+SAGGIGLS+H++RA+GSYIRGT G SNG+VPMLR FD TA
Sbjct:  165 LSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAKISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTA 255          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A6A6KWY1_HEVBR (Ribonucleoside-diphosphate reductase n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A6A6KWY1_HEVBR)

HSP 1 Score: 144 bits (364), Expect = 1.480e-40
Identity = 69/91 (75.82%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            MS++WF HASPTLF+AGT  PQLSSCFL+ +K+DSI GIYDTLK+CA ISKSAGGIG+S+H+IRA GSYIRGT G SNG+VPMLRVF+ TA
Sbjct:  193 MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAVISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 283          
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Match: A0A7C5LYA2_9BACT (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7C5LYA2_9BACT)

HSP 1 Score: 144 bits (363), Expect = 1.540e-40
Identity = 69/91 (75.82%), Postives = 79/91 (86.81%), Query Frame = 0
Query:    1 MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASISKSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA 91
            +SEKWF HA+PTLF+A T  PQ+SSCFLL +KEDSI GIYDTLKQCA IS+SAGGIGLS+H+IRA GSYI+GT G SNG+VPMLR FD TA
Sbjct:  193 LSEKWFTHATPTLFNAATPKPQMSSCFLLTMKEDSIDGIYDTLKQCAKISQSAGGIGLSIHNIRATGSYIKGTNGVSNGIVPMLRNFDMTA 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150772.3382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSZ4_9STRA3.390e-4384.62Ribonucleoside-diphosphate reductase n=1 Tax=Tribo... [more]
A0A7S0GQ21_9EUKA1.050e-4284.62Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
K8Z7A2_NANGC6.820e-4282.42Ribonucleoside-diphosphate reductase n=3 Tax=Monod... [more]
A0A0A9URS9_ARUDO7.740e-4276.67Ribonucleoside-diphosphate reductase n=1 Tax=Arund... [more]
A0A6J4JGJ0_9BACT1.170e-4178.02Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
H0YCY7_HUMAN3.580e-4175.82Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
A0A1Y3BMA8_EURMA8.880e-4175.82Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
S7V4S9_9BACT1.220e-4075.82Ribonucleoside-diphosphate reductase n=1 Tax=Cyclo... [more]
A0A6A6KWY1_HEVBR1.480e-4075.82Ribonucleoside-diphosphate reductase n=4 Tax=Penta... [more]
A0A7C5LYA2_9BACT1.540e-4075.82Ribonucleoside-diphosphate reductase (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 1..91
e-value: 1.3E-38
score: 134.9
NoneNo IPR availablePANTHERPTHR11573:SF6RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNITcoord: 1..91
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 23..90
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 24..91
e-value: 2.0E-19
score: 69.5
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150772contigH-elongata_contig150772:394..1376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150772.3382.1mRNA_H-elongata_contig150772.3382.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150772 394..1376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150772.3382.1 ID=prot_H-elongata_contig150772.3382.1|Name=mRNA_H-elongata_contig150772.3382.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MSEKWFIHASPTLFHAGTSHPQLSSCFLLPVKEDSIVGIYDTLKQCASIS
KSAGGIGLSVHSIRARGSYIRGTKGFSNGLVPMLRVFDATA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C
IPR039718Rrm1