prot_H-elongata_contig150756.3380.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150756.3380.1
Unique Nameprot_H-elongata_contig150756.3380.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig150756.3380.1 vs. uniprot
Match: D8LCC9_ECTSI (DUF547 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.630e-19
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:   21 IRDDPNFETFVESFETVQVSGLGKDAEYALWINSYNALAIKMVIDHPCKK 70
            +RDDPNFETFVES +    SGLGKDAEYALWIN+YNALAIKMV D+PCKK
Sbjct:   75 VRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKK 124          
BLAST of mRNA_H-elongata_contig150756.3380.1 vs. uniprot
Match: A0A7S1S9W6_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S9W6_ALECA)

HSP 1 Score: 65.5 bits (158), Expect = 6.320e-12
Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   19 SAIRDDPNFETFVESFETVQVSGLGKDAEYALWINSYNALAIKMVIDHPCKK 70
            +A+  D +F  FV+S E   V+ LGK+  YAL++N+YNALAIKMV DHPCK+
Sbjct:   50 AAVARDSDFSAFVQSLEAADVASLGKNETYALFMNAYNALAIKMVADHPCKR 101          
BLAST of mRNA_H-elongata_contig150756.3380.1 vs. uniprot
Match: A0A849E8E1_9HYPH (DUF547 domain-containing protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E8E1_9HYPH)

HSP 1 Score: 48.9 bits (115), Expect = 5.520e-5
Identity = 22/66 (33.33%), Postives = 37/66 (56.06%), Query Frame = 0
Query:    1 KSFAPRGDADPNTSGFSTSAIRDDPNFETFVESFETVQVSGLGKDAEYALWINSYNALAIKMVIDH 66
            K +   G A  NT  +   +  D    + +V S E ++V+G  K+ + A W+N YNA+ I++V+DH
Sbjct:   58 KKYIKPGRAGLNTFAYGKVSAADKAALQNYVRSLEAIEVTGYNKNEQLAYWLNLYNAVTIRVVLDH 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150756.3380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCC9_ECTSI1.630e-1980.00DUF547 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S1S9W6_ALECA6.320e-1255.77Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A849E8E1_9HYPH5.520e-533.33DUF547 domain-containing protein n=1 Tax=Anderseni... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150756contigH-elongata_contig150756:1246..1455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150756.3380.1mRNA_H-elongata_contig150756.3380.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150756 1246..1455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150756.3380.1 ID=prot_H-elongata_contig150756.3380.1|Name=mRNA_H-elongata_contig150756.3380.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
KSFAPRGDADPNTSGFSTSAIRDDPNFETFVESFETVQVSGLGKDAEYAL
WINSYNALAIKMVIDHPCKK
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