mRNA_H-elongata_contig15066.3377.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15066.3377.1
Unique NamemRNA_H-elongata_contig15066.3377.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15066.3377.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.890e-44
Identity = 155/554 (27.98%), Postives = 242/554 (43.68%), Query Frame = 2 
Query:   11 DHLDEWLVTLYLRAPHSTVLLCGTHKDKCVPSNIMTKSLAWLRRSRSIEAILKDVEDSVMKRHNQWKNEQLKNEHTAIVENLTVECGIPLISSSPTCYCE-NGLADLQDRLKKCGKGTRWLIPPSWRLALVVLDAVRDGVNAVEAARYYMNQEDPLSLESNGKR---SWVSLKELQLHWTHVLDSLKDDLWAKLLPDDREFALQSVMDMRERGGSLLKHP--EVVFLDVEDFALSLVPILNHKTQQRDGGGTCLFAGRQLKEQWQFDAKEKLVSKGILERRFAEFLWKNDFGALPHQA-------FDVLVKIGILLPLPLQIHTPGDHRFLQRACGNTTYCRHVKEYLVLMRLPQNAPSETMGRFNAFNNLQADWGVVAEWEFTLGRTPHGLVERLVASCHSIGNVVRNTCWRRGACFVAHEAAINLAGGSFALSLQFTQSSTSNLQTAGTLVVKAFGYREGHAVWGALRFVISTAWNIFQEFRGLAWQARVMCPKHEGTTLHFLAGVNDIKGRSPGAPIVQPGAIQHCGCQEEVASRLRTVLPPSSPLENVFK 1633
            D +  WL  LYLRAP STV+L     D  +     T      RR R + A+  +                L+      V +LT+  G+  +S       E +GL  L   + +    T   +PP+W LAL V+ A+R   N + AAR  +   +PL  +        +++S  EL   W  V+D+L+DD+ A ++  + E AL+  + + +  G  L+    + +FLDV   +  L PIL+HK + +       F  R L   W    ++ L   GIL R FA  +W+   G +  ++       F VL+K+G+ LP+  +       R    A  + +      + LV+MRL +         F+   +      V  +WEF     P+GL+ERL+ASCH +G V    CWR GA F +H+  +    G      +   S TS  ++      K FG  +   VW A+R+V S   N+ +E+ G+ W   + C KH    L+  + V    G  P  P   P A + C C  E    LR  +    P+ +  K
Sbjct:  168 DDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQ-RRVRELVAVWHEARG-------------LRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQA-ATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQP------FENRWL---WM---RDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVS---GSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVG-DPLLPAAAPDA-RRCDCLLEPGGVLRLAVEELGPVIDTGK 686
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BLAST of mRNA_H-elongata_contig15066.3377.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.930e-35
Identity = 147/551 (26.68%), Postives = 239/551 (43.38%), Query Frame = 2 
Query:   11 DHLDEWLVTLYLRAPHSTVLLCGTHKDKCVPSNIMTKSLAWLRRSRSIEAILKDVEDSVMKRHNQWKNEQLKNEHTAIVENLTVECGIPLISSSPTCYCENGLADLQDRLKKCGKGTRWLIPPSWRLALVVLDAVRDGVNAVEAARYYMNQEDPLSLESNGKRSWVSLKELQLHWTHVLDSLKDDLWA---KLLPDDREFALQSVMDMRERGGSLLK--HPEVVFLDVEDFALSLVPILNHKTQQRDGGGTCLFAGRQLKEQWQFDAKEKLVSKGILERRFAEFLWKNDFGALPHQAF-----DVLVKIGILLPLPLQI-HTPGDHRFLQRACGNTTYCRHVKEYLVLMRLPQNAPSETMGRFNAF-NNLQADWG---VVAEWEFTLGRTPHGLVERLVASCHSIGNVVRNTCWRRGACFVAHEAAINLAGGS---FALSLQFTQSSTSNLQTAGTLVVKAFGYREGHAVWGALRFVISTAWNIFQEFRGLAWQARVMCPKHEGTTLHFLAGVNDIKGRSPGAPIVQPG---AIQHCGCQEEVASRLRTVL 1600
            + + +WL  L+LR P S VLL     D  +   + T                  VE S  ++  +W+     N  +  V  LT+     L+S    C    GL+++  R+   G  T  ++PPSW LAL  LDA+RD  +   A R +++ +    + +    S+++   L   W   + S+  +L +   ++   D   A++  + + E  G +L+  H +V+FLDV   + +L PIL+HK +         F   +L        K++LV  G+L  +FAE+LW  +  A P +        VL  +G+ LPL  +  HT      +  A  +    R  ++ LV+MRLP        G       +L    G   V  +W F      HGLVER++ASCH +G+V    CWR GA F ++  A +  GG    ++  +++ +   S  +    L V  FG      +W ALR+V S+  N    + G+ W+    C  H    ++F      I+ R     +  P    A   C C     + +R VL
Sbjct:  485 EDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGA---------------VESSARRQLQEWQG----NRKSPGVTKLTILQQPSLVS----CDDGGGLSEVIARVDAQG-ATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESH------FFPRSELTAM-----KDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTASA---IDPAAAHGQIGR--QDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKT---PIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVL 987
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BLAST of mRNA_H-elongata_contig15066.3377.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 9.600e-15
Identity = 124/533 (23.26%), Postives = 201/533 (37.71%), Query Frame = 2 
Query:   26 WLVTLYLRAPHSTVLLCGTHKDKCVPSNIMTKSLAWLRRSRSIEAILKDVEDSVMKRHNQWKNEQLKNEHTAIVENLTVECGIPLISSSPTCYCE-NGLA-----DLQDRLKKCG-------------------------KGTRWLIPPSWRLALVVLDAV---------------RDGVNAVEAARYYMNQEDPLSLESNGKRSWVSLKELQLHWTHVLDSLKDDLWAKLLPDDREFALQSVMDMRERGGSLLKHPEVVFLDVEDFALSLVPILNHKTQQRDGGGTCL------FAGRQLKEQWQFDAKEKLVSKGILERRFAEFLWKNDFGALPHQAFDVLVKIGILLPLPLQIHTPGDHRFLQRACGNTTYCRHVKEYLVLMRLPQNAPSETMGRFNAFN-NLQADWGVVAEWEFTLGRTPHGLVERLVASCHSIGNVVRNTCWRRGACFVAHEAAINLAGGSFALSLQFTQSSTSNLQTAGTLVVKAFGYREGHAVWGALRFVISTAWNIFQEFRGLAWQARVMCPKHE 1465
            WL +L  R P S V+   T  D+          +A +   R   AI K            W  E  +++ TA+     VE G+ L S  P+   E +G+A       +D +  C                          +G   ++P SW +ALVVLDA+               R G  A    R    + DP +  + G      ++E++   +       +        + R    +  ++  +  GSL++H   VFLDV   A  L P+LNH+  +   G   L        G + K  WQ     +    G+L+   A  LW  D   L       L  +G+             H+   R  G           +VL+RL +  P+      + F  + +A + V   W+ ++G  P G VE+++  C SIG +   T WR G     +   +  AG +FA+ ++++   +        + +K +G     A W AL   IS    +   F GL W A + CP+H+
Sbjct:  497 WLRSLSFRIPDSDVVAVATKCDRAA-------GMAVVMAERMELAIRK------------WLREWSRSQMTAV----RVEDGVSLTSCVPSAPQERDGIALGKRKSPEDSMWACDWRQDTPGEPLPSLLHRVIYNSKGHIRGAALVLPRSWNIALVVLDALGNGRQGSRRFGARDGRRGGRATGTRRGDCREIDPAARWNRGYNMGRPIREMERRRSSSEGRRSNS------HEPRPRLGRGALNQAQYEGSLVRHETYVFLDVTWLAKILKPLLNHREDEDFFGSLSLGDTGITLDGHKDKVSWQ-----RFKQTGVLKPELAGLLWPGD---LCDYVLRTLESLGLA------------HQLDDRFAGGL---------VVLLRLGKERPASVGKELDDFRRDHEAIFSVT--WKISMG-VPPGAVEKVLTRCCSIGEL--RTFWRFGVLVQGNMGGVT-AGKTFAMLVEYSHKGSE-------IDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHK 958
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15066.3377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE2.890e-4427.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVX5_ECTSI1.930e-3526.68LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE9.600e-1523.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15066contigH-elongata_contig15066:7..5232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.7
Seed ortholog evalue2.9e-34
Seed eggNOG ortholog2880.D7FVX5
Preferred nameSLITRK2
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs2CMPC@1,2QR6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size3552
Cds size1911
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929891.6080427-UTR-H-elongata_contig15066:6..15351622929891.6080427-UTR-H-elongata_contig15066:6..1535Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15066 7..1535 -
1691679197.33063-UTR-H-elongata_contig15066:6..15351691679197.33063-UTR-H-elongata_contig15066:6..1535Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15066 7..1535 -
1622929891.684142-UTR-H-elongata_contig15066:5120..52321622929891.684142-UTR-H-elongata_contig15066:5120..5232Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15066 5121..5232 -
1691679197.388919-UTR-H-elongata_contig15066:5120..52321691679197.388919-UTR-H-elongata_contig15066:5120..5232Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15066 5121..5232 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929891.6207461-CDS-H-elongata_contig15066:1535..18321622929891.6207461-CDS-H-elongata_contig15066:1535..1832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 1536..1832 -
1691679197.3431463-CDS-H-elongata_contig15066:1535..18321691679197.3431463-CDS-H-elongata_contig15066:1535..1832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 1536..1832 -
1622929891.6310914-CDS-H-elongata_contig15066:2397..25041622929891.6310914-CDS-H-elongata_contig15066:2397..2504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 2398..2504 -
1691679197.351949-CDS-H-elongata_contig15066:2397..25041691679197.351949-CDS-H-elongata_contig15066:2397..2504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 2398..2504 -
1622929891.643429-CDS-H-elongata_contig15066:2887..29991622929891.643429-CDS-H-elongata_contig15066:2887..2999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 2888..2999 -
1691679197.3613636-CDS-H-elongata_contig15066:2887..29991691679197.3613636-CDS-H-elongata_contig15066:2887..2999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 2888..2999 -
1622929891.656859-CDS-H-elongata_contig15066:3205..40851622929891.656859-CDS-H-elongata_contig15066:3205..4085Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 3206..4085 -
1691679197.3719451-CDS-H-elongata_contig15066:3205..40851691679197.3719451-CDS-H-elongata_contig15066:3205..4085Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 3206..4085 -
1622929891.673586-CDS-H-elongata_contig15066:4605..51201622929891.673586-CDS-H-elongata_contig15066:4605..5120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 4606..5120 -
1691679197.3802555-CDS-H-elongata_contig15066:4605..51201691679197.3802555-CDS-H-elongata_contig15066:4605..5120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15066 4606..5120 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15066.3377.1prot_H-elongata_contig15066.3377.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15066 1536..5120 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15066.3377.1

>prot_H-elongata_contig15066.3377.1 ID=prot_H-elongata_contig15066.3377.1|Name=mRNA_H-elongata_contig15066.3377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=637bp
MTKSLAWLRRSRSIEAILKDVEDSVMKRHNQWKNEQLKNEHTAIVENLTV
ECGIPLISSSPTCYCENGLADLQDRLKKCGKGTRWLIPPSWRLALVVLDA
VRDGVNAVEAARYYMNQEDPLSLESNGKRSWVSLKELQLHWTHVLDSLKD
DLWAKLLPDDREFALQSVMDMRERGGSLLKHPEVVFLDVEDFALSLVPIL
NHKTQQRDGGGTCLFAGRQLKEQWQFDAKEKLVSKGILERRFAEFLWKND
FGALPHQAFDVLVKIGILLPLPLQIHTPGDHRFLQRACGNTTYCRHVKEY
LVLMRLPQNAPSETMGRFNAFNNLQADWGVVAEWEFTLGRTPHGLVERLV
ASCHSIGNVVRNTCWRRGACFVAHEAAINLAGGSFALSLQFTQSSTSNLQ
TAGTLVVKAFGYREGHAVWGALRFVISTAWNIFQEFRGLAWQARVMCPKH
EGTTLHFLAGVNDIKGRSPGAPIVQPGAIQHCGCQEEVASRLRTVLPPSS
PLENVFKAESRERGHESLDEDGEKQFMAALDNALNVTAEQDPIVDESMKS
GGWRTPEWVKDAVLAGPLGAITYYNSWAPLFKVADHWRDGAYTKAIPLTL
FALVMAMAVAGAVAAGFRKLRQTYRWWLPRASAKND*
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mRNA from alignment at H-elongata_contig15066:7..5232-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15066.3377.1 ID=mRNA_H-elongata_contig15066.3377.1|Name=mRNA_H-elongata_contig15066.3377.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5226bp|location=Sequence derived from alignment at H-elongata_contig15066:7..5232- (Himanthalia elongata Himel1 dioecious)
GGAGCTTGTGGATCATCTGGACGAGTGGCTGGTAACGCTGTACCTAAGGG
CTCCTCACTCTACCGTGCTCCTTTGTGGTACACACAAGGATAAATGTGTA
CCAAGCAATATTATGACCAAATCCCTCGCGTGGTTGAGACGGTCTCGCTC
GATTGAAGCGATCCTTAAGGATGTTGAGGATTCAGTCATGAAGAGGCACA
ATCAGTGGAAGAACGAGCAGTTAAAAAACGAGCATACGGCAATCGTGGAA
AACCTGACGGTTGAATGTGGGATTCCGCTTATTAGCTCATCTCCTACTTG
TTACTGTGAGAACGGCTTGGCCGATCTCCAGGACCGGCTGAAGAAATGTG
GAAAGGGTACGCGATGGCTAATTCCGCCATCGTGGCGTCTCGCTTTAGTG
GTGCTGGATGCCGTTCGTGATGGAGTCAACGCAGTAGAAGCTGCTCGATA
CTACATGAACCAAGAGGACCCGCTCTCACTCGAATCTAATGGAAAACGCA
GTTGGGTATCTTTAAAGGAGCTTCAACTTCACTGGACACACGTTCTCGAC
TCGCTCAAGGATGATCTTTGGGCGAAGCTCCTACCTGACGACCGCGAGTT
TGCGTTACAGAGCGTCATGGACATGAGGTAAGAGCTTATCGTAGTTTTGA
TGGTACGTGATTTTATGTTTAAACACATCATCTATCCACGCATCGGCGAA
TCACACATGGTGATTTCCCACATCATGGCCTTAATATTGAGCTACATCGA
ATAGCTGCTCTGAGAATAATGGAAGTTTCCTTTTTCCGGAGCCTGATGCA
CAGTCGTGGTCTTTTACTCCGACCATCCACTTGTCCGCCCTGTACCATTT
CAACTCACTGACTTTAATATGGACTGATAGCACTCCTGAGTGGTTACTCA
AGAAGCACGAAGTGGGGGGTGCGGCGTATTAGAAAATGGACAAAATTGCT
AAAATCACAAGTGCCTGGAAACAGGTTGTTTTTTCGCTAGTGTAATATTT
CCAATCGTTATGAAATATATATATATATATATATATATATATTATTTTTC
TTGTGGCCGCTGCATTAAAGTTATGAAGGTTTTCGTTACCGCTCCGCCAA
CTCTGTGTTTGTGTCTCGCTGTGTGTTGATTTTTATCATCCCATCAGAGA
ACGCGGTGGGTCGCTTCTAAAACACCCCGAAGTGGTGTTCTTGGATGTGG
AAGATTTTGCGCTTTCTCTTGTCCCCATCCTCAACCACAAGACGCAACAA
AGAGACGGTGGAGGAACTTGCCTATTCGCTGGACGGCAGCTTAAGGAACA
GTGGCAGTTTGATGCCAAGGAGAAACTCGTGAGCAAGGGAATACTCGAAA
GACGCTTCGCCGAATTTTTGTGGAAAAACGACTTTGGTGCCTTGCCGCAC
CAAGCGTTTGACGTTCTTGTGAAGATCGGAATTCTTCTCCCGTTGCCACT
ACAGATCCATACACCAGGCGACCACCGATTTCTACAACGAGCTTGTGGAA
ACACAACATATTGTCGCCACGTCAAAGAATATTTGGTATTGATGCGACTT
CCGCAGAACGCCCCATCTGAAACCATGGGCCGCTTTAATGCCTTCAACAA
CCTTCAAGCAGACTGGGGGGTGGTGGCGGAGTGGGAGTTCACCCTTGGAC
GAACGCCCCATGGACTGGTCGAGCGACTCGTTGCTTCCTGCCACTCTATC
GGGAACGTGGTGAGGAACACTTGCTGGAGGAGAGGTGCTTGCTTCGTTGC
TCACGAAGCAGCCATCAACCTGGCCGGTGGCTCATTTGCCCTGTCGCTAC
AATTCACTCAAAGTTCCACGTCAAACCTACAAACAGCGGGAACTCTGGTA
GTAAAGGCTTTTGGATACAGAGAGGGCCATGCAGTATGGGGGGCTCTTCG
CTTCGTAATCTCTACTGCATGGAATATTTTCCAAGAGTTCCGCGGGCTCG
CTTGGCAAGCCCGGGTAATGTGTCCAAAGCACGAGGGGACAACATTGCAC
TTTCTTGCTGGTGTCAACGATATCAAGGTTCGTCTCATAGCCTCGTTGTG
TGGACTTTAGATCTTTATATCGCTGTTCGACACACTTGCGAGCCGTAGGC
CGGGGCGCAATATATTACGGAACAACTTTCGGTAAACTTTATTCGATATA
ATGAACTCAACGCCCGCGACCTCGGTATTCGTGGTGGGATTAATAATCTA
ATTCGTGGTTCGTCTAAAAAAAATGTAACTCAGGGAAGATCTCCAGGTGC
TCCGATTGTACAGCCTGGGGCCATCCAGCATTGTGGATGTCAAGAAGAGG
TGGCATCACGCTTACGCACAGTGCTGCCGCCTTCATCACCGTTGGGTAAG
AAAGAAGGGTGCCCTAGTCAAGGCAGGGACAAAGCGCTTAAAATGTTTGG
GTAGTTTTTTGTGTGACTGAAGGTGTTATCTACCCCTATTTATGCCACGG
TCCACAGTTCCTTGTCTAGGGATCGTTATTCGAATTCTAACACCGACCAA
AATGTCACCCCCGGCAGTTGGCTCTGGGACGTGCCGTTGAATCATTGGAC
TAAGGCGTAAACTCTTCTCCCTATGTTCTCCAAGGAGTGTTATGCTTCGA
AAGAAGACTTTGTTTCGGTTTCTTGCATATCCTCTGTTTTACAGAGTATG
ACCGCTAGCCGATATTTACCCGTATATTGATGGACGCTCATATGTCAAAC
GCCCTTATTGTACGTCTGTTTCCTGTAGAAAACGTGTTCAAGGCTGAAAG
CAGAGAACGGGGTCATGAAAGCCTCGATGAAGACGGAGAGAAACAGTTCA
TGGCGGCCCTCGATAATGCGCTGAACGTTACAGCAGTGAGAACGCGTACG
GTAGATATTTTCGATCTCAGTGGCAATTCGATCGTTGGAACAGGACCAAC
CGTCAAATTATTCTAGTATTCGGGGCCGGAGGCAGTATGACTAGTTCGAA
GTTATCCGAAAGTGTTTTCACCTTCATGAACTGGCATGGTATCTTATCTT
CTACGCAACTAGTTGATCATAGGGTCCCCTCAGCTCTCTGGAATATTGCT
TCCGAAATGTAGTTTGTTAACCGCACACCTGATGTCACCTGATGTGTGGT
AAATGTAAGCCCTCGTTCGTCCACCACCTTTACAGCACATTTTTTCACAT
ATGAGTGATTCTTAGCAGTATTATTGGTCAGCCCCATTTCCCCCGCATGT
TAGTTGTACTTTAGTTTGAAGAAACTCCTAACAAAATACTAAATAGGCTC
TAAAGCAAGCAGTAAATCCTACGTATAACGTCGCTGTTTCATTTGCCAAC
TCTTCTATTCTGCACGGTTGAAATTGTTTTCCAAACTTAAATCGTGTTCT
CATGACCATACTCGAGGCTTATCGTCTCGTTCGTGTCTTTGACCTGGTAG
GAACAAGATCCGATCGTGGACGAGTCAATGAAGAGCGGGGGATGGAGGAC
GCCTGAGTGGGTAAAAGACGCTGTTCTCGCGGGACCATTGGGGGCGATTA
CTTATTACAATTCTTGGGCCCCTTTATTCAAAGTGGCCGATCACTGGCGC
GACGGTGCCTATACAAAGGCTATCCCACTGACGCTTTTTGCGTTAGTTAT
GGCCATGGCAGTGGCTGGTGCAGTCGCGGCAGGGTTCAGGAAGCTGCGTC
AAACGTATAGGTGGTGGTTACCTCGAGCTTCCGCAAAGAACGACTGATTA
CAAAGGACCATGTGTAAGTTGGCGTATGTTGCCACATTCTTATGAACCTA
TGAAATTGGAGTCGAATGGGACAAGAAAAATTGCATTTGGCGACTCACGG
GCTCTCGGGCATGTTGCTCGGTGGATCACCGACCTCACCCGGCGTAAGGA
TTACAACGCTAGAAACATTTTAGAGGTCGATTCCAAGAACCTGTCCGCGG
TCCTCGCAGCGACGGGGAATTTCATCGTTCTCGAACGTCATCCACGCGAG
CTTCGCACCTGGTGCATTGTATACAAGCATTTCAAAACAGGAGTATCAAT
TTTACAGGGATAAAGAAAACATTTCCCCGAGGACTGTTTTAGAGGATGGT
GGTACTGATAGTAGCACAGCATTGCCGTGCTTCTTGTTTTAGTGTTTGTT
TCGCACGGAATATTGTTGCCTGTCGATCTATGCGACGGCTGATAAAAATT
TGAGAGGTTTCGATAGCCTGGTATGCAAGTTTCACACGTGGTGTATTGTT
CGAAATCTCTTTACTGTGATTAGAGGAAAAAATTCCTCGAGTATTTTTTT
AGAGAATGGTGTTTCGTACAGTAGCACAGCATTACCGTGCTCCTTTTTCT
TATCTTGGTTGCGTATTTTATGGGCCATCGATGAGTGCGACGGTTGATTA
TATTGCGACATGTTTTGCCCTTTCTATGATTTCTTTTTCTTAGTAGGGTT
TCGCTATCTACAACCTCTCAGAAACAAAATATCTTATCTCGCGTTTTAGT
ATTATTTGTTTAAGTAATTTATAAATTTTAGAACTACGAGACGTGATGCA
TTATTAGTTGTAGTAACTTTGAGAACTACATCTTCCCACATGATCGGAAA
CCATCTCAGGATTAAAACATATGCCTTTCTCCTCACTCTTTGTTCCTAGC
CCTTGAGATCATGTATTGTATGCTTCGTAGGCGAGCCCTGGACTTATAGT
CTTATCATGTTGAACAAAAGGGCTATGTTACAAGTAACTGGTGATTAGCA
TTTATTTTATCATGACTGTTGGGCCTTTTCATGGTTTACTTTTACATCTA
TGACTACTCAACATGTGCTCAACGAGGTTTTTCTTGTGTTCGAATGAAGG
CTTCTCCCTTCTGCCATCTTCGTGTTTCTACCTTATACCGCCCCTCTCGC
GTAATGCTGATATGTCCTCCTCCTCGTGTAGAGAGATCAGTGATTGGTAA
AATGCACCCATACTTAATACATGATTCGACTTCTATATATTATGTGTGCC
TCTCAAAAATATATATATTATTGGAGAAACCCCATACTTATCACTATGAT
AACAAGTGAACGGTCATAAAAGATTACCAGGTATACATTTGCCTCAAACT
GAAAATGAAAACATTTCCCTTCAGGGAAGATGCTGTACTTAATTATTTTA
TTTTTGATCGATTAAAATGTCACGTAAGCTGATGTCGAAATCCAGCCCGT
GGTCACAAGGAAGAAAAAAGTTCAACACAATATACCGATCACCCGATCTC
CTATCTGGACACCCTGATGAAGACGG
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Coding sequence (CDS) from alignment at H-elongata_contig15066:7..5232-

>mRNA_H-elongata_contig15066.3377.1 ID=mRNA_H-elongata_contig15066.3377.1|Name=mRNA_H-elongata_contig15066.3377.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3822bp|location=Sequence derived from alignment at H-elongata_contig15066:7..5232- (Himanthalia elongata Himel1 dioecious)
ATGACCAAATCCCTCGCGTGGTTGAGACGGTCTCGCTCGATTGAAGCGAT
CCTTAAGGATGTTGAGGATTCAGTCATGAAGAGGCACAATCAGTGGAAGA
ACGAGCAGTTAAAAAACGAGCATACGGCAATCGTGGAAAACCTGACGGTT
GAATGTGGGATTCCGCTTATTAGCTCATCTCCTACTTGTTACTGTGAGAA
CGGCTTGGCCGATCTCCAGGACCGGCTGAAGAAATGTGGAAAGGGTACGC
GATGGCTAATTCCGCCATCGTGGCGTCTCGCTTTAGTGGTGCTGGATGCC
GTTCGTGATGGAGTCAACGCAGTAGAAGCTGCTCGATACTACATGAACCA
AGAGGACCCGCTCTCACTCGAATCTAATGGAAAACGCAGTTGGGTATCTT
TAAAGGAGCTTCAACTTCACTGGACACACGTTCTCGACTCGCTCAAGGAT
GATCTTTGGGCGAAGCTCCTACCTGACGACCGCGAGTTTGCGTTACAGAG
CGTCATGGACATGAGATGACCAAATCCCTCGCGTGGTTGAGACGGTCTCG
CTCGATTGAAGCGATCCTTAAGGATGTTGAGGATTCAGTCATGAAGAGGC
ACAATCAGTGGAAGAACGAGCAGTTAAAAAACGAGCATACGGCAATCGTG
GAAAACCTGACGGTTGAATGTGGGATTCCGCTTATTAGCTCATCTCCTAC
TTGTTACTGTGAGAACGGCTTGGCCGATCTCCAGGACCGGCTGAAGAAAT
GTGGAAAGGGTACGCGATGGCTAATTCCGCCATCGTGGCGTCTCGCTTTA
GTGGTGCTGGATGCCGTTCGTGATGGAGTCAACGCAGTAGAAGCTGCTCG
ATACTACATGAACCAAGAGGACCCGCTCTCACTCGAATCTAATGGAAAAC
GCAGTTGGGTATCTTTAAAGGAGCTTCAACTTCACTGGACACACGTTCTC
GACTCGCTCAAGGATGATCTTTGGGCGAAGCTCCTACCTGACGACCGCGA
GTTTGCGTTACAGAGCGTCATGGACATGAGAGAACGCGGTGGGTCGCTTC
TAAAACACCCCGAAGTGGTGTTCTTGGATGTGGAAGATTTTGCGCTTTCT
CTTGTCCCCATCCTCAACCACAAGACGCAACAAAGAGACGGTGGAGGAAC
TTGCCTATTCGCTGGACGGCAGCTTAAGGAACAGTGGCAGTTTGATGCCA
AGGAGAAACTCGTGAGCAAGGGAATACTCGAAAGACGCTTCGCCGAATTT
TTGTGGAAAAACGACTTTGGTGCCTTGCCGCACCAAGCGTTTGACGTTCT
TGTGAAGATCGGAATTCTTCTCCCGTTGCCACTACAGATCCATACACCAG
GCGACCACCGATTTCTACAACGAGCTTGTGGAAACACAACATATTGTCGC
CACGTCAAAGAATATTTGGTATTGATGCGACTTCCGCAGAACGCCCCATC
TGAAACCATGGGCCGCTTTAATGCCTTCAACAACCTTCAAGCAGACTGGG
GGGTGGTGGCGGAGTGGGAGTTCACCCTTGGACGAACGCCCCATGGACTG
GTCGAGCGACTCGTTGCTTCCTGCCACTCTATCGGGAACGTGGTGAGGAA
CACTTGCTGGAGGAGAGGTGCTTGCTTCGTTGCTCACGAAGCAGCCATCA
ACCTGGCCGGTGGCTCATTTGCCCTGTCGCTACAATTCACTCAAAGTTCC
ACGTCAAACCTACAAACAGCGGGAACTCTGGTAGTAAAGGCTTTTGGATA
CAGAGAGGGCCATGCAGTATGGGGGGCTCTTCGCTTCGTAATCTCTACTG
CATGGAATATTTTCCAAGAGTTCCGCGGGCTCGCTTGGCAAGCCCGGGTA
ATGTGTCCAAAGCACGAGGGGACAACATTGCACTTTCTTGCTGGTGTCAA
CGATATCAAGAGAACGCGGTGGGTCGCTTCTAAAACACCCCGAAGTGGTG
TTCTTGGATGTGGAAGATTTTGCGCTTTCTCTTGTCCCCATCCTCAACCA
CAAGACGCAACAAAGAGACGGTGGAGGAACTTGCCTATTCGCTGGACGGC
AGCTTAAGGAACAGTGGCAGTTTGATGCCAAGGAGAAACTCGTGAGCAAG
GGAATACTCGAAAGACGCTTCGCCGAATTTTTGTGGAAAAACGACTTTGG
TGCCTTGCCGCACCAAGCGTTTGACGTTCTTGTGAAGATCGGAATTCTTC
TCCCGTTGCCACTACAGATCCATACACCAGGCGACCACCGATTTCTACAA
CGAGCTTGTGGAAACACAACATATTGTCGCCACGTCAAAGAATATTTGGT
ATTGATGCGACTTCCGCAGAACGCCCCATCTGAAACCATGGGCCGCTTTA
ATGCCTTCAACAACCTTCAAGCAGACTGGGGGGTGGTGGCGGAGTGGGAG
TTCACCCTTGGACGAACGCCCCATGGACTGGTCGAGCGACTCGTTGCTTC
CTGCCACTCTATCGGGAACGTGGTGAGGAACACTTGCTGGAGGAGAGGTG
CTTGCTTCGTTGCTCACGAAGCAGCCATCAACCTGGCCGGTGGCTCATTT
GCCCTGTCGCTACAATTCACTCAAAGTTCCACGTCAAACCTACAAACAGC
GGGAACTCTGGTAGTAAAGGCTTTTGGATACAGAGAGGGCCATGCAGTAT
GGGGGGCTCTTCGCTTCGTAATCTCTACTGCATGGAATATTTTCCAAGAG
TTCCGCGGGCTCGCTTGGCAAGCCCGGGTAATGTGTCCAAAGCACGAGGG
GACAACATTGCACTTTCTTGCTGGTGTCAACGATATCAAGGGAAGATCTC
CAGGTGCTCCGATTGTACAGCCTGGGGCCATCCAGCATTGTGGATGTCAA
GAAGAGGTGGCATCACGCTTACGCACAGTGCTGCCGCCTTCATCACCGTT
GGGGAAGATCTCCAGGTGCTCCGATTGTACAGCCTGGGGCCATCCAGCAT
TGTGGATGTCAAGAAGAGGTGGCATCACGCTTACGCACAGTGCTGCCGCC
TTCATCACCGTTGGAAAACGTGTTCAAGGCTGAAAGCAGAGAACGGGGTC
ATGAAAGCCTCGATGAAGACGGAGAGAAACAGTTCATGGCGGCCCTCGAT
AATGCGCTGAACGTTACAGCAAAAACGTGTTCAAGGCTGAAAGCAGAGAA
CGGGGTCATGAAAGCCTCGATGAAGACGGAGAGAAACAGTTCATGGCGGC
CCTCGATAATGCGCTGAACGTTACAGCAGAACAAGATCCGATCGTGGACG
AGTCAATGAAGAGCGGGGGATGGAGGACGCCTGAGTGGGTAAAAGACGCT
GTTCTCGCGGGACCATTGGGGGCGATTACTTATTACAATTCTTGGGCCCC
TTTATTCAAAGTGGCCGATCACTGGCGCGACGGTGCCTATACAAAGGCTA
TCCCACTGACGCTTTTTGCGTTAGTTATGGCCATGGCAGTGGCTGGTGCA
GTCGCGGCAGGGTTCAGGAAGCTGCGTCAAACGTATAGGTGGTGGTTACC
TCGAGCTTCCGCAAAGAACGACTGAGAACAAGATCCGATCGTGGACGAGT
CAATGAAGAGCGGGGGATGGAGGACGCCTGAGTGGGTAAAAGACGCTGTT
CTCGCGGGACCATTGGGGGCGATTACTTATTACAATTCTTGGGCCCCTTT
ATTCAAAGTGGCCGATCACTGGCGCGACGGTGCCTATACAAAGGCTATCC
CACTGACGCTTTTTGCGTTAGTTATGGCCATGGCAGTGGCTGGTGCAGTC
GCGGCAGGGTTCAGGAAGCTGCGTCAAACGTATAGGTGGTGGTTACCTCG
AGCTTCCGCAAAGAACGACTGA
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