prot_H-elongata_contig150420.3366.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150420.3366.1
Unique Nameprot_H-elongata_contig150420.3366.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: D7G0B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B1_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 6.420e-35
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    7 EVPTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVM 78
            EVPTVLVVGATGEMGRVVVRKLLLRGF+VRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKV+
Sbjct:   79 EVPTVLVVGATGEMGRVVVRKLLLRGFSVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVI 150          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.000e-29
Identity = 64/74 (86.49%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    5 PPEVPTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVM 78
            P EVP VLVVGATGE GRVVVRKLLLRGF VRVLVRNLYSSTLDLLGTG T+ QGDL N  SIVDAVSGVDKVM
Sbjct:  450 PEEVPEVLVVGATGETGRVVVRKLLLRGFKVRVLVRNLYSSTLDLLGTGVTYTQGDLGNAASIVDAVSGVDKVM 523          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A7S2ZMD3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMD3_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 2.430e-22
Identity = 48/70 (68.57%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVM 78
            P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++  GD+T+  ++++AVSGVDKV+
Sbjct:   84 PVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVV 153          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A7S3EC31_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC31_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 3.840e-22
Identity = 48/70 (68.57%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVM 78
            P VLVVGATGE+GRV+VRKLLLRG+ VRVLVRNL++ TLDLLGTG ++  GD+T+  ++++AVSGVDKV+
Sbjct:   84 PVVLVVGATGEVGRVIVRKLLLRGYQVRVLVRNLFTETLDLLGTGCSYVMGDITDPYALMEAVSGVDKVV 153          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A2V3J7E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7E6_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 8.270e-22
Identity = 49/73 (67.12%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVMGAL 81
            P VLVVGATGE GR++VRKL+LRG+ VRVLVRNLYSSTLDLLGTG +F +G L +Y S+++A   VDKV+ A+
Sbjct:   58 PEVLVVGATGETGRIIVRKLVLRGYNVRVLVRNLYSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVICAV 130          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A1X6PIK3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIK3_PORUM)

HSP 1 Score: 95.5 bits (236), Expect = 3.680e-21
Identity = 47/73 (64.38%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVMGAL 81
            P VLVVGATGE GR++VRKL+LRGF VRVLVR+L++ TLD LGTG +F +GDL +  +++DAVSGVDK++ A+
Sbjct:  125 PEVLVVGATGETGRIIVRKLVLRGFRVRVLVRDLFTKTLDTLGTGVSFVKGDLRDADTLLDAVSGVDKIVCAI 197          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: R7Q993_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q993_CHOCR)

HSP 1 Score: 92.4 bits (228), Expect = 3.090e-20
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVMGAL 81
            P VLV GATGE GRV+VRKL+LRG+ VRVLVR+L+SSTLDLLGTG +F +G L +Y S+++A   VDKV+ A+
Sbjct:   10 PEVLVAGATGETGRVIVRKLVLRGYNVRVLVRDLFSSTLDLLGTGVSFVKGSLDDYDSLLEATGDVDKVVCAV 82          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: M2VV10_GALSU (Transcription repressor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV10_GALSU)

HSP 1 Score: 89.4 bits (220), Expect = 5.290e-19
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   11 VLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVMGAL 81
            VLV+GATG++G ++ +KLLLRG+ VRVLVRNLYSSTLD +GTG TFA+GD+    S+ DA+  +DKV+ A+
Sbjct:  118 VLVLGATGKIGNIITKKLLLRGYRVRVLVRNLYSSTLDAVGTGCTFAKGDVRELSSLYDAMENIDKVIWAV 188          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A7S1XIJ7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIJ7_9RHOD)

HSP 1 Score: 89.0 bits (219), Expect = 7.260e-19
Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    7 EVPTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTN-YRSIVDAVSGVDKVMGAL 81
            E P VLVVGATGE GRVVVRKLLLRGF VRVLVR+LYS+TLD L T  +F +GD+T+    + DAV+GVDK++  L
Sbjct:   99 EPPMVLVVGATGETGRVVVRKLLLRGFQVRVLVRDLYSTTLDKLPTACSFVKGDVTDSVFELQDAVAGVDKIVWVL 174          
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Match: A0A4D9D9K4_9STRA (NmrA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.390e-19
Identity = 44/70 (62.86%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    9 PTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLLGTGATFAQGDLTNYRSIVDAVSGVDKVM 78
            PTVLVVGATG++GR VVRKL+L+G+ V+VLVRNLYS+TL+LLGTG ++ +GDL++  S+  A  G DKV+
Sbjct:  145 PTVLVVGATGDIGRQVVRKLILKGYRVQVLVRNLYSTTLNLLGTGVSYVKGDLSDLSSLRTACDGADKVV 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150420.3366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0B1_ECTSI6.420e-3597.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGW1_9STRA3.000e-2986.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2ZMD3_9RHOD2.430e-2268.57Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3EC31_9RHOD3.840e-2268.57Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3J7E6_9FLOR8.270e-2267.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PIK3_PORUM3.680e-2164.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q993_CHOCR3.090e-2064.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2VV10_GALSU5.290e-1960.56Transcription repressor n=1 Tax=Galdieria sulphura... [more]
A0A7S1XIJ7_9RHOD7.260e-1965.79Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A4D9D9K4_9STRA7.390e-1962.86NmrA domain-containing protein n=2 Tax=Monodopsida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 7..81
e-value: 3.3E-18
score: 68.1
NoneNo IPR availablePANTHERPTHR43574:SF8HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173coord: 9..78
NoneNo IPR availablePANTHERPTHR43574FAMILY NOT NAMEDcoord: 9..78
IPR008030NmrA-like domainPFAMPF05368NmrAcoord: 11..78
e-value: 7.6E-15
score: 55.1
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 10..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150420contigH-elongata_contig150420:371..1262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150420.3366.1mRNA_H-elongata_contig150420.3366.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150420 371..1262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150420.3366.1 ID=prot_H-elongata_contig150420.3366.1|Name=mRNA_H-elongata_contig150420.3366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
MCRIPPEVPTVLVVGATGEMGRVVVRKLLLRGFAVRVLVRNLYSSTLDLL
GTGATFAQGDLTNYRSIVDAVSGVDKVMGAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008030NmrA-like
IPR036291NAD(P)-bd_dom_sf