mRNA_H-elongata_contig15029.3360.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 236 bits (601), Expect = 6.440e-69 Identity = 119/169 (70.41%), Postives = 137/169 (81.07%), Query Frame = 1
Query: 4 KVTELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENG-LCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVT 507
KV+ L++GE VCI SDGW SCAND+YMSLT +LIT AWKL+TLSVDC K GTTTG+ALAAGI A VAKH + GKVT +TTDCEPSMVKMGR+L + + T +GC N+RLEST+SI FNGP VKK M LARGLVT Y SSQ ADRL FV+TYLGV+ KRV+QDVVT
Sbjct: 31 KVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT 199
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.810e-64 Identity = 127/249 (51.00%), Postives = 162/249 (65.06%), Query Frame = 1
Query: 1 SKVTELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGL-CTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
S+V +L E+V I +DGW S +N+SYMSLTV+ I W+L LS++C K G+T GE LA IT+ + +H + G+VT TDCEPSMVK GR+LE G H+GC NHR+EST S FNG + A+ AR +V Y SSQM+ RLA F+ L + VLQDV TRW S M+ERLL L + IK HE D + P+L+ D VL ++ P+L+PFMQAQK LE KYVTGS+ VP I ELR L
Sbjct: 66 SEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGL 312
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.080e-63 Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 1
Query: 4 KVTELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
+V L GEHV + SDGW S +ND+YM T + I+ + L+ L V+C+K G TTGE L + A +A++ + + TTDCEPSMVK GR+LEEN TH+GC+ HRLES S AF GP V KA+ LAR +VT Y +SSQ +DRL +R + VE+K+V+QDV TRW S + RLL LR I +HE D + PLL D VL++V P+ +PF+ +QK E K VT SLV+P+I +LR L
Sbjct: 40 EVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLE-QMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDEL 285
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 213 bits (542), Expect = 4.350e-62 Identity = 127/249 (51.00%), Postives = 160/249 (64.26%), Query Frame = 1
Query: 1 SKVTELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENG-LCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
S+V +L E V I +DGW S N+SYMSLTV+ I WKL LS+DC K GTTTGE LAA + V +HD+ G+V TDCEPSM+K GR+LE +G +H+GC NHR+EST S FNG + A+ LAR LV Y SSQMA RL L +E V+QDV TRW S MV RLL L + IK HE D++ PLL+ D VL ++ P+L+PFM+AQK LE +YVTGS+ + + ELR L
Sbjct: 30 SEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGL 276
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.860e-58 Identity = 119/242 (49.17%), Postives = 155/242 (64.05%), Query Frame = 1
Query: 19 LKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
+ GEHV + SDGW +ND+YMS T + I+ + L+ L ++C+K T GE L + A +A++ + G+ ITTDCE SMVK GR+LEEN TH+GC+ HRLES S AF GP V KA+ LARG+VT YTISSQ +DRL V + VE+K V+QDV TRW S + RL+ LR I +HE D PLL D VL++V +L+PFM AQK LE K VT LV P+I +L+ L
Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLE-QVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGL 241
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.340e-46 Identity = 101/228 (44.30%), Postives = 136/228 (59.65%), Query Frame = 1
Query: 61 SCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
S +ND+YM+ T + I+ + L+ L ++ +K G TTGE L + A +A++ + G+ TTDCEP MVK GR+LEEN +H+GC+ HR ES S AF GP V KA+ L RG+VT YT+SSQ ++RL + VE+K+V+QDV TRW S E D + PLL D VL++V P+L PFM AQK LE K VT SLV +I +LR L
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMC-DIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDEL 213
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: A0A2D0SFW7_ICTPU (zinc finger BED domain-containing protein 1-like n=2 Tax=Ictalurus punctatus TaxID=7998 RepID=A0A2D0SFW7_ICTPU) HSP 1 Score: 90.5 bits (223), Expect = 4.340e-17 Identity = 74/253 (29.25%), Postives = 123/253 (48.62%), Query Frame = 1
Query: 4 KVTELLK-GEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDI-KGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLE----LRELIKKHEEADKLEPLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
+V E LK G + +D W S + Y+SLTV I + WKL++L + TGEA+AAG+T A+A + + + ITTD +++K + T + C+ HRL S V +A+ + + +V ++ S + LA Y + + +++ + TRW S+ MV R+LE + E++ K ++ L P T D VLE + L P ++ L YV+ S + P +H TS+
Sbjct: 142 RVQEQLKSGSYFATTADLWSSRTLEPYLSLTVHFIDQDWKLVSLCLQTVYFPEDHTGEAIAAGLTDALASWGLSEERQVCITTDSGTNIIKAAEL----NRWTRLQCFGHRLNSAIEKVHQDKRVDRAVGVCKKVVAAFSYSWKKKLDLAAAQEEY-HLPQHKLISETPTRWGSRQQMVRRVLEQKRAITEVLSKDKKTRSLVP--TWQDVDVLESIDAALSPLLEFTDALSGESYVSVSFLKPVMHLFNTSI 387
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: UPI001EEB43F9 (zinc finger BED domain-containing protein 4-like n=2 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEB43F9) HSP 1 Score: 87.8 bits (216), Expect = 2.520e-16 Identity = 70/242 (28.93%), Postives = 127/242 (52.48%), Query Frame = 1
Query: 13 ELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMT-LARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLE-PLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHEL 732
E+L +V + +D W S +SYM+LT I+ ++L ++ ++C + + T LA I V K ++GK+ I +D ++V G I E L H GC+ H + N I + V +++T + +V+ + S+ ++L V+ LG+E K+++ V TRW+S M++R+ EL++ +K E P+LT + ++ VL+PF + + + Y+T S V+ FI+ L
Sbjct: 16 EMLTVSNVTLTTDTWTSSNTESYMALTSHHISNDFELKSILLECSVIRSSHTSVNLAVEIDKIVKKFHLEGKIMIIVSDNASNIV--GAITNELKL-KHFGCFAHTI---NLILQDALKVCQSLTDRIKAIVSHFKRSTSATEKLR-EVQKNLGLEPKKLVLQVATRWNSTFYMLQRISELKDAVKTTVALINKEIPVLTEDEWKTCSELVMVLEPFEEVTRNISGENYLTASQVIGFINGL 250
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: UPI001EEC5FDD (zinc finger BED domain-containing protein 4-like n=4 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEC5FDD) HSP 1 Score: 87.8 bits (216), Expect = 3.780e-16 Identity = 70/242 (28.93%), Postives = 127/242 (52.48%), Query Frame = 1
Query: 13 ELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMT-LARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLE-PLLTTADRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHEL 732
E+L +V + +D W S +SYM+LT I+ ++L ++ ++C + + T LA I V K ++GK+ I +D ++V G I E L H GC+ H + N I + V +++T + +V+ + S+ ++L V+ LG+E K+++ V TRW+S M++R+ EL++ +K E P+LT + ++ VL+PF + + + Y+T S V+ FI+ L
Sbjct: 196 EMLTVSNVTLTTDTWTSSNTESYMALTSHHISNDFELKSILLECSVIRSSHTSVNLAVEIDKIVKKFHLEGKIMIIVSDNASNIV--GAITNELKL-KHFGCFAHTI---NLILQDALKVCQSLTDRIKAIVSHFKRSTSATEKLR-EVQKNLGLEPKKLVLQVATRWNSTFYMLQRISELKDAVKTTVALINKEIPVLTEDEWKTCSELVMVLEPFEEVTRNISGENYLTASQVIGFINGL 430
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Match: UPI00094EB9E0 (zinc finger BED domain-containing protein 1-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094EB9E0) HSP 1 Score: 84.0 bits (206), Expect = 7.730e-15 Identity = 70/248 (28.23%), Postives = 112/248 (45.16%), Query Frame = 1
Query: 10 TELLKGEHVCINSDGWISCANDSYMSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDI-KGKVTKITTDCEPSMVKMGRILEENGLCTHVGCYNHRLESTNSIAFNGPMVKKAMTLARGLVTWYTISSQMADRLA*FVRTYLGVEKKRVLQDVVTRWSSKCTMVERLLELRELIKKHEEADKLEPLLTTA--DRAVLEMVLPVLQPFMQAQKLLENRKYVTGSLVVPFIHELRTSL 744
TEL H +D W+S + Y +TV I+ W L + + TGE LAAG+ A+ + + K+ ITTD ++ K + + GL C+ HRL +++A+ L + +V+ ++ SS+ LA V+ YLG+ + + TRW S+ TM++R+LE I + DK L + D VLE V L P L +YV+ S + P + S+
Sbjct: 181 TELAAVRHFAATTDMWLSHTMEPYFGVTVHFISDDWLLQSHRLQTSYFPDEHTGELLAAGLQEALDSWGLPQNKLVAITTDDGDNIKKAVELNKWTGL----QCFGHRLHRAIGKGLRNEGIQQAIALCKKIVSTFSYSSKKRRDLA-IVQNYLGLPNHMLTAETPTRWGSRQTMIQRVLEQERAISHVLKDDKKSRHLVPSWQDLDVLEAVNKALGPLQDFTDALSGEQYVSVSYLKPVLKLFNASI 423 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15029.3360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15029.3360.1 >prot_H-elongata_contig15029.3360.1 ID=prot_H-elongata_contig15029.3360.1|Name=mRNA_H-elongata_contig15029.3360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp MSLTVSLITRAWKLITLSVDCRKLAGTTTGEALAAGITAAVAKHDIKGKVback to top mRNA from alignment at H-elongata_contig15029:6141..6884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15029.3360.1 ID=mRNA_H-elongata_contig15029.3360.1|Name=mRNA_H-elongata_contig15029.3360.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=744bp|location=Sequence derived from alignment at H-elongata_contig15029:6141..6884+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15029:6141..6884+ >mRNA_H-elongata_contig15029.3360.1 ID=mRNA_H-elongata_contig15029.3360.1|Name=mRNA_H-elongata_contig15029.3360.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig15029:6141..6884+ (Himanthalia elongata Himel1 dioecious)back to top |