mRNA_H-elongata_contig15022.3358.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15022.3358.1
Unique NamemRNA_H-elongata_contig15022.3358.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: D7FQS4_ECTSI (Peroxisomal membrane protein 70 abcd3, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS4_ECTSI)

HSP 1 Score: 608 bits (1567), Expect = 3.230e-206
Identity = 354/581 (60.93%), Postives = 404/581 (69.54%), Query Frame = 1
Query:  583 LLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEAR---------------------VRETPPVRN-GVDGVNLSTE---NAPAWTRAKV-KTVQPEAPAEVGKDNAQ------RVAEDGKESLGLASSDIACGDG-ARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMM-------GGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGGV 2205
            +LKY Q ELSLRFRQRLT HV+SKYMEGFTFYAVSNLD RIAN DQAITQD+ERFA S+A L+SNITKPVLD+L+YVR LS KVDA APATMIAYL+LSGVAL ALRKPTA YTALV QQEGEYRYVNSRLL NA      Q+IAFY+GNTKE+QVL+GVFD+LV VTRRSERFRHSLG LDSVVAKYFA++VGWTVVSRPFVN + PRHA STAAEVYQDYHSSGRMML L++ALGRLVL+GRELARLSGFSSRVTGLIDVIDD NRG++K+G++P     A+                                              R TPP RN GV GVNL+TE   N+P+W   +  +      P  +G ++        R+     E    +S   A  DG   +  G +  A+    +GQPEL PEA                              G   L+ SGSV++ E++VIEF+DVPLVTPTGEVL+EALSFKV+AGMNVLVAGPNGSGKSSLFRVLGGLWPL GGTL KPP S LFYVPQRPYLALGTLRDQVIYPHT ++ +  GV
Sbjct:   19 VLKYCQSELSLRFRQRLTEHVMSKYMEGFTFYAVSNLDDRIANADQAITQDVERFAASMAELFSNITKPVLDMLIYVRRLSDKVDAVAPATMIAYLLLSGVALSALRKPTAMYTALVAQQEGEYRYVNSRLLTNA------QEIAFYKGNTKEKQVLEGVFDKLVSVTRRSERFRHSLGALDSVVAKYFASLVGWTVVSRPFVNRDHPRHAHSTAAEVYQDYHSSGRMMLKLAAALGRLVLSGRELARLSGFSSRVTGLIDVIDDANRGVFKRGQVPNSPGAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARITPPRRNPGVSGVNLATEEDGNSPSWAADEGGREGASGEPGRIGNEDGDVSGTIPRLTSSLSEPARPSSISRAPADGHPAMMAGTKASAV-GVALGQPELEPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGAPPLQRSGSVVVQEDSVIEFVDVPLVTPTGEVLVEALSFKVEAGMNVLVAGPNGSGKSSLFRVLGGLWPLRGGTLSKPPTSRLFYVPQRPYLALGTLRDQVIYPHTRQEAASKGV 592          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A835Z212_9STRA (ATP-binding cassette sub-family D member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z212_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 7.790e-166
Identity = 286/602 (47.51%), Postives = 367/602 (60.96%), Query Frame = 1
Query:  379 MVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLE 2184
            MVPG  S EA  LA VAGLL++RT LD+ ML LTTT+ERAIV RD  +F  G+  FA+  VP+++VNSLLKY Q E++LRFRQRLTAH++ +YM GFT+Y V+NLDGR+ N DQAITQD+E FAES+A+L+SN+TKP+LDI +YVR L+ +VD  AP ++IAYL+ SGVAL A+RKPT  YTALV  QEG YR+VN RL+ +A      ++IAFY GN KE+ VL   F  LV + RRS++FR+S+ V+DS+ AKY A++VGW  VSRPF+NL DPR   ++ + +YQ+YHS+GRMMLNLS ALGRLVL+GREL RLSGFS+RVT L+DVI+DV +G Y +                                  +VR +PP  NG                             V    A++                                          L  +AG E                           SG V+     VIEF  VPL TP G+VL+ +L+F+V++GMNVLVAGPNG GKSSLFR+LGGLWP+ GG L+KP  S +FYVPQRPYLALG+LR+QV+YP  ++
Sbjct:    1 MVPGVLSPEAGFLAGVAGLLLLRTYLDITMLELTTTVERAIVQRDAGSFGRGVRTFAKFMVPLSIVNSLLKYGQSEVALRFRQRLTAHIMDRYMAGFTYYGVTNLDGRLKNVDQAITQDVELFAESMADLFSNVTKPMLDICLYVRRLARRVDPLAPYSLIAYLLASGVALTAMRKPTGLYTALVQHQEGVYRHVNGRLITHA------EEIAFYGGNKKEKAVLSAAFADLVALVRRSQQFRYSMAVVDSIAAKYLASVVGWLTVSRPFLNLKDPRFKDASPSVLYQEYHSAGRMMLNLSQALGRLVLSGRELTRLSGFSARVTSLLDVIEDVAQGSYHR---------------------------------TQVRASPPPPNGTPKXXXXXXXXXXXXXXXXXXXXXXXXXXVASGAAEK------------------------------------------LLGDAGVED------------------------DESGGVVEESERVIEFDGVPLTTPNGDVLVRSLTFRVESGMNVLVAGPNGCGKSSLFRLLGGLWPVRGGRLVKPMRSKMFYVPQRPYLALGSLREQVLYPQAVD 497          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A5D6XLN4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLN4_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 4.850e-145
Identity = 253/620 (40.81%), Postives = 361/620 (58.23%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGGV 2205
            F  R  +L +++VPGP + E +  A+VA LL  RTS D+++L + T+IERAI++R    F   +  F  + +P++ VN LLKY   EL+LRFR RLT H+   Y++GF +Y VSNLD RI+N DQ +T D+ERF+ SVA+LYSN++KP+LDI++Y   L+  + A  PATM+AYLV+SG+ L  LR+PT  +T    + EG +R++NSRL+ ++      ++IAFY GN +E+++L   F RL+ + R+S++FR S+ V+D++VAKY AT+VG+ VVS+PF++++DPRH +ST AE  +DY  SG+M++ L+ A+GRLVL+GREL RL+GF++RVT +IDV+ D++ G Y++  L  D ++A                                    DG   S     A T A                          E LGL                                                                 P+  VL+  ++VI+F DVPLVTP G+VL+ AL+ +V++GMNV+VAGPNG GKSSLFR+LG LWPL GGTL KP  + LFY+PQRPYL LG+LRDQVIYPH+LE +   G+
Sbjct:   61 FYLRFVKLFKVIVPGPFTAEVAFAALVAALLAARTSFDIMVLQIITSIERAIISRSTEDFTRHLRRFFVLMLPMSCVNCLLKYGHTELTLRFRNRLTKHLYKHYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNLSKPMLDIVIYSAKLTSSIGAQGPATMLAYLVVSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHS------EEIAFYNGNVREKKILDESFARLIDLVRKSQQFRFSVSVIDNIVAKYLATVVGFLVVSKPFLDMSDPRHLKSTYAERMEDYFRSGKMLIKLAEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDEGRYQRTMLKSDDDDA---------------------------------GDADGATKS-----ATTSA--------------------------EGLGL----------------------------------------------------------------HPNKGVLVHRDHVIQFEDVPLVTPNGDVLVRALNLRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQVIYPHSLEDMQASGL 546          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A0D2UCF6_CAPO3 (ATP-binding cassette n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCF6_CAPO3)

HSP 1 Score: 446 bits (1146), Expect = 1.100e-143
Identity = 258/611 (42.23%), Postives = 352/611 (57.61%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHT 2178
            F  R+ +LLRI++PG  + E   + +VA  +V RT  D+ M+  TT IE  I++RD + FR G+ HF    +P++ V +LLKY   EL+LRFR RLT H+ S+Y+ GFT+Y +SNLD RIAN DQ +TQD+E+F +S+A+LYSN++KP+LDI +Y R L+G + A  PA M+AYL +SG  L  LR+PT  YT    + EGE+R+VNSRL+ NA      ++IAFY GN KE+ V+   F+RLV + RRS +FR  +GV+DS VAKYFATI+G+TVVSRPF++    R    + +E+ +DY+ SGRM++NL++A+GRLVLAGREL RL+GF++R+T L++V+ D+N   YK+             V S +A   AT+AA                                                 +DN+                                        G P +AP AG                                 +  +++VI+F +VPLVTP G++L+ ALSF+VK+G NVLVAGPNG GKSSLFR LG LWP+ GG L KP    LFYVPQRPY+ LGTLRDQVIYPH+
Sbjct:   65 FFARLRKLLRIVIPGVFTPEMGFIVLVAAAMVGRTYCDLWMIKTTTAIESTIISRDAAGFREGLVHFFNALLPISCVTNLLKYGLNELALRFRTRLTNHLYSEYLRGFTYYKISNLDNRIANADQLLTQDLEKFCDSIADLYSNVSKPILDIFIYARKLAGSIGAQGPAYMLAYLAVSGAFLTRLRRPTGWYTVNEQRLEGEFRFVNSRLITNA------EEIAFYNGNEKEKLVITQTFNRLVNMLRRSMQFRFGMGVIDSFVAKYFATIIGFTVVSRPFMDPTSERFKGMSHSEMMEDYYKSGRMLINLATAVGRLVLAGRELTRLAGFTTRMTDLMEVLHDLNHDRYKRTM-----------VQSQQAGASATAAAA------------------------------------------------QDNS----------------------------------------GLPPVAPNAGK--------------------------------IFYQDHVIKFENVPLVTPNGDILVRALSFEVKSGCNVLVAGPNGCGKSSLFRTLGELWPIFGGKLTKPAKEKLFYVPQRPYMTLGTLRDQVIYPHS 538          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A2D4CER2_PYTIN (Long chain acyl-CoA transporter ABC transporter n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CER2_PYTIN)

HSP 1 Score: 443 bits (1139), Expect = 1.410e-142
Identity = 253/614 (41.21%), Postives = 351/614 (57.17%), Query Frame = 1
Query:  340 QAFLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTL 2181
            Q FLRR  RL +++VPG  + E     +VA LL  RTS D+ +L + T+IERAI++R    F   +  F  + +PVA VNSLLKY Q EL+LRFR RLT H+   Y++GF +Y VSNLD RI N DQ +T D+ERF+ SVA LYSN++KP+LDI +Y   L+  +    PATM+AYLV SG  L  LR+PT  +T    + EG +R++NSRL+ ++      ++IAFY GN +E+ +L   F RL+ + R+S++FR S+ V+DS+VAKYFAT+VG+ VVS+PF++L+ PRH  ST AE  +DY  SG+M++ LS A+GRLVL+GREL RL+GF++RVT +++V+ D++RG Y++  L  +                                 P  ++  DG +    N  + T A                           SLGLA                                                                P+G  ++  ++VI+F  VPLVTP G+VL+ +L  +V++GMNV+VAGPNG GKSSLFR+LG LWPL GGTL KP  + LFY+PQRPYL LG+LRDQ+IYPHT+
Sbjct:   59 QEFLRRFLRLFKVIVPGVFTPEVGYALLVALLLAARTSFDIQILQIMTSIERAIISRSTDGFLLHLRRFLLVMLPVACVNSLLKYGQTELTLRFRDRLTRHLYDLYLKGFVYYKVSNLDNRIGNADQLLTVDVERFSHSVAELYSNVSKPLLDIAIYAVKLTSSIGFQGPATMLAYLVASGACLTWLRQPTGRFTIAEQKMEGNFRFMNSRLITHS------EEIAFYNGNVREKHILDESFSRLISLLRQSQQFRFSVAVIDSIVAKYFATVVGFLVVSKPFLDLDHPRHRTSTYAERMEDYFRSGKMLVKLSEAMGRLVLSGRELTRLAGFTARVTEMLEVLGDLDRGTYQRTMLASE---------------------------------PTSKDDEDGDDDGNTNPKSKTTAAA-------------------------SLGLA----------------------------------------------------------------PNGGKMVFADHVIQFEGVPLVTPNGDVLVRSLDVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGTLTKPARNGLFYIPQRPYLTLGSLRDQIIYPHTV 544          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: H3GA94_PHYRM (Uncharacterized protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA94_PHYRM)

HSP 1 Score: 431 bits (1109), Expect = 8.500e-139
Identity = 245/620 (39.52%), Postives = 353/620 (56.94%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGGV 2205
            F RR  RL ++++PGP + E    A+VA +LV RTS D+V+L+  T IERAI++R  + F   +  F  + +P++ VNSLLKY   ELSLRFR RLT H+  +Y++GF +Y VSNLD RI+N DQ +T D+ERF+ SVA+LYSN++KP+LDI +Y   LS  +    P  M++YLV SG  L  LR+PT+ +T    Q EG +R++NSRL+ ++      ++IAFY GN +E+++L   F RL+ + R S++FR S+ V+D++VAKY AT+VG++V+S+PF+++++ R   +T AE  +DY  SG+M+L +S A+GRLVL+GREL RL+GF++RVT +IDV+ D+++G Y++  L  + E+                                         LS E+    T A                          ESLGL                                                                 P+   +   ++VI F DVPLVTP G+VL+ +L+ KVK+GMNV+VAGPNG GKSSLFR+LG LWP+ GG L KP  + LFY+PQRPYL LG+LRDQ+IYPH+L+ +   G+
Sbjct:   17 FYRRFLRLFKVIIPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAIERAIISRSQTEFLRHLRRFVAIMLPMSCVNSLLKYGHTELSLRFRTRLTRHLYEQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPILDIAIYAVKLSSTIGVEGPVIMLSYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHS------EEIAFYNGNVREKRILDQSFSRLIDLVRSSQQFRFSMSVIDNIVAKYLATVVGYSVLSKPFLDMSNKRLEHTTYAERMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARVTEMIDVLSDLDQGKYQRTMLKAEEED-----------------------------------------LSEESKAQSTSA--------------------------ESLGLY----------------------------------------------------------------PNKGEISYRDHVIHFEDVPLVTPNGDVLVPSLNIKVKSGMNVVVAGPNGCGKSSLFRILGELWPMFGGRLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSLKDMQASGL 499          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A8K1FFC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFC8_PYTOL)

HSP 1 Score: 431 bits (1108), Expect = 4.380e-138
Identity = 247/619 (39.90%), Postives = 350/619 (56.54%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGG 2202
            FL R  RL +++VPG  + E     +VAGLL  RTS D+++L + T+IERAI++R    F   +  F  + +PV+ VN LLKY Q EL+LRFR RLT H+   Y++GF +Y VSNLD RI+N DQ +T D+ERF+ SV++LYSN++KP+LDI +Y   L+  +    PATM+ YLV SG+ L  LR+PT  +T    + EG +R++N+RL+ ++      ++IAFY GN +E+++L   F RL+ + R+S++FR S+ V+D++VAKYFAT+VG+ VVSRPF++   PRH  S+ AE  +DY  SG+M++ LS A+GRLVL+GREL RL+GF++RVT ++DV+ D++ G Y++  L KD E      P+A+A                                                                      SLGL                                                                 P+   +L E++VI+F DVPLVTP G+VL++AL+ +V++GMNV+VAGPNG GKSSLFR+LG LWPL GG L KP  + LFY+PQRPYL LG+LRDQ+IYPH+ E +   G
Sbjct:   61 FLTRFMRLFKVIVPGLVTPEVGYAFLVAGLLAARTSFDILILQIVTSIERAIISRSTEGFMHHLRRFFLVMLPVSCVNCLLKYGQTELTLRFRNRLTRHLYDLYLKGFIYYKVSNLDNRISNADQLLTVDVERFSNSVSDLYSNVSKPLLDICIYAVELTSSIGFQGPATMLGYLVFSGMFLTWLRQPTGRFTIAEQKMEGNFRFMNARLITHS------EEIAFYNGNVREKRILDQSFTRLIDLVRQSQQFRFSISVIDNIVAKYFATVVGYFVVSRPFLDKEHPRHLNSSYAERMEDYFRSGKMLIKLSEAMGRLVLSGRELTRLAGFTARVTEMMDVLTDLDEGRYQRTML-KDNEEDSESSPTAKAS-------------------------------------------------------------------ASSLGLY----------------------------------------------------------------PNKGEMLYEDHVIQFEDVPLVTPNGDVLVKALNVRVESGMNVVVAGPNGCGKSSLFRILGELWPLFGGKLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSHEDMIASG 541          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A662XR71_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XR71_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 5.460e-138
Identity = 245/619 (39.58%), Postives = 354/619 (57.19%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGG 2202
            F  R  RL +++VPGP + E    A+VA +LV RTS D+V+L+  T +ERAI++R    F   M  F  + +P++ VNS+LKY   ELSLRFR RLT H+ ++Y++GF +Y VSNLD RI+N DQ +T D+ERF+ SVA+LYSN++KPVLDI +Y   L+  +    P  M+ YLV SG  L  LR+PT+ +T    Q EG +R++NSRL+ ++      ++IAFY GN +E+++L   F+RL+ + R+S++FR S+ V+D++VAKY AT VG+ V+SRPF+++++PR   ST AE  +DY  SG+M+L +S A+GRLVL+GREL RL+GF++RVT +IDV+ D++ G Y++  L  + E+ L+G   A++ +                                                                   ESLGL             P   E++                                                      ++VI+F DVPLVTP G+VL+ +L+ KV++GMN++VAGPNG GKSSLFR+LG LWPL GG L KP  + LFY+PQRPYL LG+LRDQ+IYPH+L+++   G
Sbjct:   41 FYHRFLRLFKVIVPGPFTAEVGFAALVAVMLVARTSFDIVVLHTFTAVERAIISRSQKDFMHHMRRFVAVMLPMSCVNSMLKYGHTELSLRFRTRLTKHLYAQYVKGFVYYKVSNLDNRISNADQLLTVDVERFSNSVADLYSNMSKPVLDISLYSFKLAASIGVEGPVIMLGYLVASGFFLTWLRQPTSRFTIAEQQMEGNFRFMNSRLITHS------EEIAFYNGNVREKRILDESFNRLIDLVRKSQQFRFSVSVIDNIVAKYLATCVGYAVLSRPFLDMSNPRLEHSTYAERMEDYFRSGKMLLKMSEAMGRLVLSGRELTRLAGFTARVTEMIDVLTDLDEGKYQRTMLKAEDED-LLGESKAQSSSA------------------------------------------------------------------ESLGL------------FPNKGEIKY----------------------------------------------------RDHVIQFEDVPLVTPNGDVLVPSLNIKVQSGMNIVVAGPNGCGKSSLFRILGELWPLFGGKLTKPERNGLFYIPQRPYLTLGSLRDQIIYPHSLKEMQASG 522          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: L8HEP2_ACACA (ABC exporter, ATPbinding protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HEP2_ACACA)

HSP 1 Score: 428 bits (1100), Expect = 9.990e-137
Identity = 247/619 (39.90%), Postives = 347/619 (56.06%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKVSCGG 2202
            F  R+ RLL+I++PGP + E+  + +VA +++ RT  DV ML   T IER I+ RD   F     +F     P+A+VN+LL+Y   EL+LRFR RLT H+  +Y+ GFT+Y VSNLD RIAN DQ +TQD+E+F  SV+ LYSN++KP+LDI +Y R LSG + A  PA+M+ YL++SG+ L  LR+P   +T    + EGE+R+VNSRL+ ++      +++AFY GN KER V+   F  LV   R S +FR  LG++DS++AKY A+ VG+ VVSRPF +LN+ +   ++ AE+ ++Y+ SGRM++N++ A+GRLVLAGREL RL+G+++RVT L +V+ D+N G YK+  + K+                                                                                                                        P +GT                         LKP+   +++++++I+F DVP+VTP G++LIE+LSF+V++GMNVLVAGPNG GKSSLFR+LG LWPL GGTL KP  + LFYVPQRPYLALGTLRDQVIYPH+ E+    G
Sbjct:   83 FFSRLWRLLKILIPGPFTPESGFMVLVAAMMLSRTWCDVWMLKNGTAIERTIITRDFQGFVVVFLNFVMAFFPIALVNNLLRYGLNELALRFRTRLTQHLYQEYLNGFTYYKVSNLDNRIANADQLLTQDVEKFCTSVSELYSNVSKPILDIFIYARKLSGAIGAQGPASMLGYLLVSGLLLTRLRRPIGKFTVNEQRLEGEFRFVNSRLITHS------EEVAFYGGNEKERSVISKSFRGLVNHLRYSIQFRALLGIVDSIIAKYCASCVGYLVVSRPFFDLNNAKLRNASQAELMEEYYKSGRMLMNMALAVGRLVLAGRELTRLAGYTARVTELQNVLKDLNAGTYKRTMVSKN------------------------------------------------------------------------------------------------------------------------PASGTSTR---------------------ELKPNSGKIITQDHIIKFEDVPIVTPNGDLLIESLSFEVRSGMNVLVAGPNGCGKSSLFRILGELWPLFGGTLTKPAKNKLFYVPQRPYLALGTLRDQVIYPHSHEQFRKAG 554          
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Match: A0A6G0WHH1_9STRA (ABC transporter domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHH1_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 2.850e-136
Identity = 247/615 (40.16%), Postives = 345/615 (56.10%), Query Frame = 1
Query:  346 FLRRISRLLRIMVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFRGGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFYAVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSGKVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLLANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLDSVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNLSSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAENALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAWTRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRGNEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKPSGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSGKSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHTLEKV 2190
            F  R  RL RI+VPG  + E +   +VAGLL  RTS D+ +L + T+IERAI+ R    F   ++ F  + +PV+VVN LLKY Q ELSLRFR RL+  + +KY+  +T+Y VSNLD RI NPDQ +T D+ERFA SV++LYSN+TKP+LDI +Y   L+G +  + P TM+ YLV SGV L  LR+PT  +T    + EG YR+VN+RL+ ++      ++IAFY GN +E  +L+  +D L+ + R+S++FR S+ V+D+++AKYFAT+VG+ +VSRPF++LNDPRHA S+ A+  +DY  SG+M++ L+ A+GRLVL+GREL RL+GF+ RVT +I V+ D++ G Y                                                             TR  ++                   EDG E                                                                    K  G++   ++NVIEF +VPL+TP G+VL+ +LSFKV++GMNV+V GPNG GKSSLFR+LG LWP+ GG L+KP  S LFY+PQRPYL LG+LRDQ++YP T+EK+
Sbjct:   58 FFDRFMRLFRIIVPGLWTPEVAYAVLVAGLLAARTSFDITILQMMTSIERAIIGRSSKDFIHHLTRFLLIMLPVSVVNCLLKYGQTELSLRFRTRLSTFLYTKYLHEYTYYKVSNLDTRITNPDQLLTVDVERFATSVSDLYSNVTKPLLDISIYAFKLTGSIGISGPLTMLGYLVGSGVFLTWLRQPTGRFTIAEQRLEGNYRFVNARLITHS------EEIAFYHGNEREHSILQSSYDALINLIRQSQQFRFSISVVDNIIAKYFATVVGFLLVSRPFLDLNDPRHANSSHADRMEDYFRSGKMLMKLAEAMGRLVLSGRELTRLAGFTLRVTDMIQVLHDLHNGQY-------------------------------------------------------------TRTMIQN------------------EDGIE--------------------------------------------------------------------KQKGTIEY-QDNVIEFQNVPLMTPNGDVLVRSLSFKVESGMNVVVCGPNGCGKSSLFRILGELWPMFGGKLVKPARSHLFYIPQRPYLTLGSLRDQILYPDTIEKM 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15022.3358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQS4_ECTSI3.230e-20660.93Peroxisomal membrane protein 70 abcd3, putative n=... [more]
A0A835Z212_9STRA7.790e-16647.51ATP-binding cassette sub-family D member 3 n=1 Tax... [more]
A0A5D6XLN4_9STRA4.850e-14540.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0D2UCF6_CAPO31.100e-14342.23ATP-binding cassette n=1 Tax=Capsaspora owczarzaki... [more]
A0A2D4CER2_PYTIN1.410e-14241.21Long chain acyl-CoA transporter ABC transporter n=... [more]
H3GA94_PHYRM8.500e-13939.52Uncharacterized protein n=24 Tax=Phytophthora TaxI... [more]
A0A8K1FFC8_PYTOL4.380e-13839.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XR71_9STRA5.460e-13839.58Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
L8HEP2_ACACA9.990e-13739.90ABC exporter, ATPbinding protein n=1 Tax=Acanthamo... [more]
A0A6G0WHH1_9STRA2.850e-13640.16ABC transporter domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15022contigH-elongata_contig15022:2377..7451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score611.3
Seed ortholog evalue5e-172
Seed eggNOG ortholog2880.D7FQS4
Preferred nameABCD3
KEGG koko:K05677
KEGG TC3.A.1.203.1
KEGG Pathwayko02010,ko04146,map02010,map04146
GOsGO:0000038,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009653,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019395,GO:0019752,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0030587,GO:0031090,GO:0031224,GO:0031231,GO:0031288,GO:0031300,GO:0031301,GO:0031903,GO:0031907,GO:0031974,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033036,GO:0034440,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042579,GO:0042623,GO:0042626,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043492,GO:0043621,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0046395,GO:0046942,GO:0046983,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0055114,GO:0070013,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0090702,GO:0097159,GO:0097367,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902495,GO:1904949,GO:1990351
EggNOG free text desc.ATP-binding cassette sub-family D
EggNOG OGsCOG4178@1,KOG0060@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionABC transporter type 1, transmembrane domain
Ec32 orthologEc-01_000320.1
Exons9
Model size2256
Cds size1878
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15022.3358.1prot_H-elongata_contig15022.3358.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15022 2755..7451 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929889.6651807-UTR-H-elongata_contig15022:2376..27541622929889.6651807-UTR-H-elongata_contig15022:2376..2754Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15022 2377..2754 +
1691679196.7422097-UTR-H-elongata_contig15022:2376..27541691679196.7422097-UTR-H-elongata_contig15022:2376..2754Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15022 2377..2754 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929889.6800601-CDS-H-elongata_contig15022:2754..27941622929889.6800601-CDS-H-elongata_contig15022:2754..2794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 2755..2794 +
1691679196.7536166-CDS-H-elongata_contig15022:2754..27941691679196.7536166-CDS-H-elongata_contig15022:2754..2794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 2755..2794 +
1622929889.6941204-CDS-H-elongata_contig15022:3194..33581622929889.6941204-CDS-H-elongata_contig15022:3194..3358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 3195..3358 +
1691679196.7611642-CDS-H-elongata_contig15022:3194..33581691679196.7611642-CDS-H-elongata_contig15022:3194..3358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 3195..3358 +
1622929889.7150948-CDS-H-elongata_contig15022:3722..38601622929889.7150948-CDS-H-elongata_contig15022:3722..3860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 3723..3860 +
1691679196.7690165-CDS-H-elongata_contig15022:3722..38601691679196.7690165-CDS-H-elongata_contig15022:3722..3860Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 3723..3860 +
1622929889.7324839-CDS-H-elongata_contig15022:4064..41751622929889.7324839-CDS-H-elongata_contig15022:4064..4175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4065..4175 +
1691679196.7791283-CDS-H-elongata_contig15022:4064..41751691679196.7791283-CDS-H-elongata_contig15022:4064..4175Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4065..4175 +
1622929889.7535534-CDS-H-elongata_contig15022:4413..44841622929889.7535534-CDS-H-elongata_contig15022:4413..4484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4414..4484 +
1691679196.7874699-CDS-H-elongata_contig15022:4413..44841691679196.7874699-CDS-H-elongata_contig15022:4413..4484Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4414..4484 +
1622929889.773259-CDS-H-elongata_contig15022:4740..48491622929889.773259-CDS-H-elongata_contig15022:4740..4849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4741..4849 +
1691679196.7988586-CDS-H-elongata_contig15022:4740..48491691679196.7988586-CDS-H-elongata_contig15022:4740..4849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 4741..4849 +
1622929889.7899745-CDS-H-elongata_contig15022:5161..53931622929889.7899745-CDS-H-elongata_contig15022:5161..5393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 5162..5393 +
1691679196.812182-CDS-H-elongata_contig15022:5161..53931691679196.812182-CDS-H-elongata_contig15022:5161..5393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 5162..5393 +
1622929889.8105257-CDS-H-elongata_contig15022:5763..65001622929889.8105257-CDS-H-elongata_contig15022:5763..6500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 5764..6500 +
1691679196.822432-CDS-H-elongata_contig15022:5763..65001691679196.822432-CDS-H-elongata_contig15022:5763..6500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 5764..6500 +
1622929889.825749-CDS-H-elongata_contig15022:7175..74511622929889.825749-CDS-H-elongata_contig15022:7175..7451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 7176..7451 +
1691679196.832308-CDS-H-elongata_contig15022:7175..74511691679196.832308-CDS-H-elongata_contig15022:7175..7451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15022 7176..7451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15022.3358.1

>prot_H-elongata_contig15022.3358.1 ID=prot_H-elongata_contig15022.3358.1|Name=mRNA_H-elongata_contig15022.3358.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=626bp
MVPGPCSLEASCLAIVAGLLVVRTSLDVVMLNLTTTIERAIVARDMSAFR
GGMSHFARMCVPVAVVNSLLKYLQGELSLRFRQRLTAHVISKYMEGFTFY
AVSNLDGRIANPDQAITQDIERFAESVANLYSNITKPVLDILVYVRSLSG
KVDATAPATMIAYLVLSGVALGALRKPTAAYTALVTQQEGEYRYVNSRLL
ANAQGEFNDQDIAFYRGNTKERQVLKGVFDRLVGVTRRSERFRHSLGVLD
SVVAKYFATIVGWTVVSRPFVNLNDPRHARSTAAEVYQDYHSSGRMMLNL
SSALGRLVLAGRELARLSGFSSRVTGLIDVIDDVNRGLYKKGRLPKDAEN
ALVGVPSAEAENIATSAAVAVAAEARVRETPPVRNGVDGVNLSTENAPAW
TRAKVKTVQPEAPAEVGKDNAQRVAEDGKESLGLASSDIACGDGARLPRG
NEVQALHSEIVGQPELAPEAGTEVVAVEGGGGVRLAAKGRAMMGGGALKP
SGSVLLSENNVIEFIDVPLVTPTGEVLIEALSFKVKAGMNVLVAGPNGSG
KSSLFRVLGGLWPLAGGTLLKPPGSSLFYVPQRPYLALGTLRDQVIYPHT
LEKVSCGGVGVAHVVGQASTALAGFL
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mRNA from alignment at H-elongata_contig15022:2377..7451+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15022.3358.1 ID=mRNA_H-elongata_contig15022.3358.1|Name=mRNA_H-elongata_contig15022.3358.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5075bp|location=Sequence derived from alignment at H-elongata_contig15022:2377..7451+ (Himanthalia elongata Himel1 dioecious)
GCCGCGCTCTCTTTTTATAACCAGTACAAATCTATATAGCGGCTTTGGAT CGTTTCGCATCCAGAGCTTTATCCACAGCTTGCTTATTTGAAGCGTGGAC GTGGATCGTGCCGATTTACTAGATTGCAGAGGACGTGTTCGAATGCGTCT GTAATATACAAATCGCCGAAAGCAGTTCTTCCAAATAAAGTGCTCAAGTC TGCTGTGTAAGGTTCCCTACCCTGAAGAATGAAAGGACTGCCTTATTTCA CCAGAAAATCAAACTGAACGCCGGGCGAGAGGGTGACGAGCTGGGTGACT CTTCAGCTGAAGTCCTTGCTCGAACCGTTCCTCTTTTACCAGGCGTTTCT CAGGCGCATCTCCCGGTTGCTGAGAATAATGGTACCAGGTCCATGCTCTC TGGAGGCGAGCTGCTTAGGTGAGCGCGACATTTTTCCTTGTTGCGCCTTC AGGCCTATATATTTTATATATCCTGCACATCAAACAGCGGTAATGGTAAC AGTTTATTATTCTGAGATCACGATACGTACGTATATAGTAGCAACATAAA ATTACATCAAACATCTTAGACGGGTTTTCATGTGACAGGCCCCGTCTAAC GATCGTCCAGAGATAGGAAATATCGGTAGTTCCCGTCTATCGTGGGAGAT CACATGCAGGATGGCGCGACGTTACGGTTGGCGAAATTAGTGACCAAGCA CGGTGAGTGGCCCCATCGGCCGAACGCGAGAAAAACAACGATACAGATGT ATGTTTTCCTACTTCGAGAAGCGTTGCCGATTGACGTTACCCACGATACG CACGATTTTATCAAACAGCAATCGTGGCGGGATTGCTCGTGGTACGAACT TCTCTGGACGTGGTGATGCTGAACCTGACCACGACTATTGAGCGCGCGAT CGTCGCGAGGGACATGAGCGCTTTCAGGGGTGGCATGTCCCATTTTGCAC GGATGTGCGTTCCGGTGGCGGTCGTCAACTCGGTGAGAAGCACTTTTTTC TTACCTAGAGCAGCGTTTATTCGCCTTAGCTACCGTGACGAGGGAGTTTG AATCCAACGTGATGCTGCGGAAGAACATCTCAAGGCGCTCGCCCCGAGCC TGTCTCCGTCCCACCTAAATATCCCGGGATAACTGACACGATGTATCCCC GCGATGAGTACCGCCTCGTGGTCGGAAAGGCTTAAGGTGTGCTGGAATCC CTTCAAACGCGGCTTTCCTTGCAGCGCTACTGCTGCACTCGCTATTGCGC CAGGATTTTTTGCGATTCCTTCGCCGTGCGAGCAATAGGCTTACTTCCAT ATGGCTTGATGTCCGTGCCACTTTGCCGCAATGCTGCTCTCTCCAGCTGC TCAAGTACCTTCAGGGGGAGCTCTCGTTGCGATTTCGGCAGCGACTGACG GCACACGTGATATCGAAGTACATGGAGGGCTTCACATTTTACGCCGTGTC TAATCTGGACGGCCGCATCGCCAACCCCGACCAGGTGATACTAATGCACA CATGGGATTGCGCGCCTCTAATGCCTTTTTTACAGACCGCGGTTTTCCTG ATCTCTAGAAGGAGTATTCGGTACATTATACCGTATCCAGAAGCACTCGG CCACGTAGCCTCCTCGTTGGATGCTCACAACGTTTCTGAGTTTTGTTGTT GTTGATGTTGTTTTTTCTCGTGTGTCTTTTTACGTCAGGCGATAACGCAG GATATTGAACGCTTCGCCGAGTCAGTGGCGAATCTCTACTCCAACATCAC CAAGCCGGTGTTAGACATCCTGGTGTACGTTCGAAGCCTCTCGGGCAAGG TCGGTAGAGTACTCCAGGCCCAGCCCTCTCTTCAACGGGGTAGAGCTGTG GACATTTGTGTTCGCTCGAGTACACTGGTGATCGCCCGTGGCAGCGCTGA GGCTGCGTCAGCTTCCGCTCGTGCCTTCTTACGAGCTGCGACGAACCAGT ATTGCTCTCTTAGATAAAAGCTATTAATACAACGATATTCTGGTTTAAAT GTGGAATGCTCGTTTATCTTTTTGCTGGTATGTTCAGGTGGATGCAACGG CCCCCGCGACGATGATAGCCTACCTCGTCTTGTCGGGGGTAGCTCTCGGG GCGCTAAGGTGACGTGAACATGACGCGATATCACCGCGCGCGCGCTTGTG TGAGCGTATCGTTTTTTCGATGTTGATATTGTCCCAGGACCCAAGGCTGG TCGCCGAATCCTGTTCTGCACGCGTCATAGTGTTTTTAGGGTGAAATTCC TCTTTCCGCAGCTTTTTCGATTGTCCCCGTGAAGTAGTTGTTCAGTTCCA GACTTGAAGCGGCATCGATCTAGCCGCCAAACGGAAACGCCCCCCTTTTT TTTCTTTGAAACAGGAAACCGACGGCGGCGTACACGGCCCTCGTTACCCA GCAGGAGGGAGAGTATCGTTACGTCAATAGCCGACTGCTGGCCAACGCCC AAGGCGAGTTTAACGACCAAGACGTAGACGCGTGAATCGTCGAGGTCGTG TTGTGCCGGCGAGGCCTTCAGCGTGTAGCGCCACATCCGCCGAGACCGAT CAACGCTTCGCCCGAAACGTCCGTTGTGGTTTCTTCTTGCGGTCAACGGT TCAGCCCGTCTCTCGTCTTCCTCTCTTAACACCGTTCGTGAAATCTTCGA ACACGATGACGTCCAAAAATGCTCCGCGCGCATTTGGTCAGCTCCCTAAT CAAGCAATACCTAGCGATGATACCTTATACATATTGTCTCGGACCCGGCC TCTCTCACTCCTGCTCGCGCGTTTTCCACGCAGAGATCGCGTTCTACAGG GGCAACACGAAGGAGCGGCAGGTGCTGAAGGGAGTGTTCGATAGGCTGGT GGGTGTCACGAGGCGATCAGAGCGTTTCCGTCACTCCCTGGGAGTCCTGG ACTCGGTGGTCGCCAAGTACTTCGCGACGATCGTCGGCTGGACAGTCGTA TCGCGGCCGTTCGTGAACCTCAATGACCCGAGACACGCCCGAAGCACCGC GGCGGAGGTGTACCAAGGTCGGTACATTGATGAGAAGGATATGGCGTCAC GTGATTGAACATTCTCCTCGCCCAGAAATTGCCCGACACCAAAGGTAGAC CTTACAGACAGCGGGGCGGTTACCAACCGCGGTTGACGCTTTGTTCATCG TGTAGTAAGCTGCAGGGACGTCATGTCATGACAAGGCGAGTCCATGCCCC CCCCAAGATCCCGCCCGTGACCTTATGGCGTACCGCGGGAGAAAATAAGC ATTCTTAGTGAGACGTAGCAATATATCACTCTAGGCGGGCAGGCAAGGCA CGCTCTCATGAACCCTGACGCCGCACTTTGGCTTGTGCCATCCTTTCCCG CCTTTTCGTGACTCACTATTCTTTGAAATCCTTGAAGACTACCACTCGAG CGGCAGGATGATGCTCAATCTATCATCAGCCCTGGGTCGCCTGGTTCTTG CCGGGCGCGAGCTGGCGAGATTGTCGGGCTTCAGCTCCCGCGTCACAGGA CTGATCGACGTCATTGATGATGTCAACAGAGGTCTCTACAAGAAGGGCCG CCTTCCAAAGGACGCCGAGAACGCGTTAGTTGGCGTACCGAGCGCCGAAG CAGAAAATATAGCGACGTCGGCCGCTGTGGCGGTGGCGGCCGAAGCTCGC GTGCGAGAAACGCCTCCCGTTCGAAACGGGGTGGATGGGGTGAACCTTTC AACCGAAAATGCGCCGGCGTGGACCCGTGCGAAGGTCAAAACGGTGCAGC CAGAAGCGCCCGCGGAGGTTGGTAAGGACAATGCTCAGAGAGTAGCCGAA GACGGAAAAGAAAGTTTGGGGTTGGCCTCGTCGGATATCGCCTGCGGAGA CGGCGCAAGGCTTCCCCGGGGTAACGAAGTCCAGGCGTTACATTCGGAAA TTGTAGGACAGCCAGAGCTTGCGCCCGAGGCTGGAACTGAGGTGGTAGCG GTGGAAGGTGGTGGTGGGGTGCGATTAGCAGCAAAGGGCCGGGCTATGAT GGGTGGGGGCGCGCTGAAGCCGTCGGGGTCGGTGCTGTTGAGCGAGAACA ATGTGATCGAGTTTATCGACGTGCCTCTTGTGACGCCAACGGGGGAGGTG CTGATCGAAGCCCTCTCCTTCAAGGTGATTGGACTGAGAGACAGGACTCG GGTTGTCCGCGCGTCGCCGTTATCCGCGTCAACTTTCTAAACGGTGCGGA TTGCAAAGAGGCGGGGGTTATGACACCCTGCAGCCGTGGTGGCGAGCGCT GCGTACGCCGCCAGCACAGTTTTCCTGAAAGAGAAAAACCAACTCGTGTC ACTTTTCCACTGTGATACGCAGGATTCTGTCGTCGCCAAGTGCGCACCGC GCACGCAATATCGCGCGCTCAGTTTTGTTTTAGAGCTTGGGTATATATAT ATATTATATATATATATATATTATGTGTGGTCATATCACATATTATATAT CCTATAGTATGGATCAACCGGGTATGGTTGCCTCCTTCTTCTCGTGGTCA GCTGAACAGGGAAAAATAATTTACGCCGCAATTTAGTTTCGCACTCGGAG GAGAGTGCTATGCGTCGTAGTCAGTATCGCAGTGAAATATGTAGGGCATG ACGTAGTTTGATGCGAGCCATAGTACAACTCGGTAACTGTTGGGCAAGTC ATATTTTTACGTCTCAGTAGTGCCTCGCTCAAAATGTCATGCCCTCTCAT CAATCCAAGCAAAACGTATCCGTCATCGTCTGCTGGGCAGCAACACCGTC ATCTTCATCGCAATCGCAATCGCAATCGTGGTCGTCGCGGTCTTCGCAGG TGAAAGCGGGCATGAACGTTCTGGTCGCCGGCCCGAACGGTTCGGGAAAG TCGAGCCTCTTTCGCGTGTTAGGCGGGCTGTGGCCTCTGGCGGGGGGGAC GTTGCTGAAGCCTCCCGGGTCAAGTCTCTTTTACGTGCCACAAAGACCGT ACCTCGCGCTTGGGACACTTCGAGACCAGGTCATCTATCCACACACGCTG GAGAAGGTGAGCTGCGGGGGGGTGGGGGTGGCACATGTCGTCGGCCAGGC TTCAACGGCATTAGCCGGCTTCCTG
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Coding sequence (CDS) from alignment at H-elongata_contig15022:2377..7451+

>mRNA_H-elongata_contig15022.3358.1 ID=mRNA_H-elongata_contig15022.3358.1|Name=mRNA_H-elongata_contig15022.3358.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3756bp|location=Sequence derived from alignment at H-elongata_contig15022:2377..7451+ (Himanthalia elongata Himel1 dioecious)
ATGGTACCAGGTCCATGCTCTCTGGAGGCGAGCTGCTTAGATGGTACCAG
GTCCATGCTCTCTGGAGGCGAGCTGCTTAGCAATCGTGGCGGGATTGCTC
GTGGTACGAACTTCTCTGGACGTGGTGATGCTGAACCTGACCACGACTAT
TGAGCGCGCGATCGTCGCGAGGGACATGAGCGCTTTCAGGGGTGGCATGT
CCCATTTTGCACGGATGTGCGTTCCGGTGGCGGTCGTCAACTCGCAATCG
TGGCGGGATTGCTCGTGGTACGAACTTCTCTGGACGTGGTGATGCTGAAC
CTGACCACGACTATTGAGCGCGCGATCGTCGCGAGGGACATGAGCGCTTT
CAGGGGTGGCATGTCCCATTTTGCACGGATGTGCGTTCCGGTGGCGGTCG
TCAACTCGCTGCTCAAGTACCTTCAGGGGGAGCTCTCGTTGCGATTTCGG
CAGCGACTGACGGCACACGTGATATCGAAGTACATGGAGGGCTTCACATT
TTACGCCGTGTCTAATCTGGACGGCCGCATCGCCAACCCCGACCAGCTGC
TCAAGTACCTTCAGGGGGAGCTCTCGTTGCGATTTCGGCAGCGACTGACG
GCACACGTGATATCGAAGTACATGGAGGGCTTCACATTTTACGCCGTGTC
TAATCTGGACGGCCGCATCGCCAACCCCGACCAGGCGATAACGCAGGATA
TTGAACGCTTCGCCGAGTCAGTGGCGAATCTCTACTCCAACATCACCAAG
CCGGTGTTAGACATCCTGGTGTACGTTCGAAGCCTCTCGGGCAAGGCGAT
AACGCAGGATATTGAACGCTTCGCCGAGTCAGTGGCGAATCTCTACTCCA
ACATCACCAAGCCGGTGTTAGACATCCTGGTGTACGTTCGAAGCCTCTCG
GGCAAGGTGGATGCAACGGCCCCCGCGACGATGATAGCCTACCTCGTCTT
GTCGGGGGTAGCTCTCGGGGCGCTAAGGTGGATGCAACGGCCCCCGCGAC
GATGATAGCCTACCTCGTCTTGTCGGGGGTAGCTCTCGGGGCGCTAAGGA
AACCGACGGCGGCGTACACGGCCCTCGTTACCCAGCAGGAGGGAGAGTAT
CGTTACGTCAATAGCCGACTGCTGGCCAACGCCCAAGGCGAGTTTAACGA
CCAAGACGAAACCGACGGCGGCGTACACGGCCCTCGTTACCCAGCAGGAG
GGAGAGTATCGTTACGTCAATAGCCGACTGCTGGCCAACGCCCAAGGCGA
GTTTAACGACCAAGACATCGCGTTCTACAGGGGCAACACGAAGGAGCGGC
AGGTGCTGAAGGGAGTGTTCGATAGGCTGGTGGGTGTCACGAGGCGATCA
GAGCGTTTCCGTCACTCCCTGGGAGTCCTGGACTCGGTGGTCGCCAAGTA
CTTCGCGACGATCGTCGGCTGGACAGTCGTATCGCGGCCGTTCGTGAACC
TCAATGACCCGAGACACGCCCGAAGCACCGCGGCGGAGGTGTACCAAGAT
CGCGTTCTACAGGGGCAACACGAAGGAGCGGCAGGTGCTGAAGGGAGTGT
TCGATAGGCTGGTGGGTGTCACGAGGCGATCAGAGCGTTTCCGTCACTCC
CTGGGAGTCCTGGACTCGGTGGTCGCCAAGTACTTCGCGACGATCGTCGG
CTGGACAGTCGTATCGCGGCCGTTCGTGAACCTCAATGACCCGAGACACG
CCCGAAGCACCGCGGCGGAGGTGTACCAAGACTACCACTCGAGCGGCAGG
ATGATGCTCAATCTATCATCAGCCCTGGGTCGCCTGGTTCTTGCCGGGCG
CGAGCTGGCGAGATTGTCGGGCTTCAGCTCCCGCGTCACAGGACTGATCG
ACGTCATTGATGATGTCAACAGAGGTCTCTACAAGAAGGGCCGCCTTCCA
AAGGACGCCGAGAACGCGTTAGTTGGCGTACCGAGCGCCGAAGCAGAAAA
TATAGCGACGTCGGCCGCTGTGGCGGTGGCGGCCGAAGCTCGCGTGCGAG
AAACGCCTCCCGTTCGAAACGGGGTGGATGGGGTGAACCTTTCAACCGAA
AATGCGCCGGCGTGGACCCGTGCGAAGGTCAAAACGGTGCAGCCAGAAGC
GCCCGCGGAGGTTGGTAAGGACAATGCTCAGAGAGTAGCCGAAGACGGAA
AAGAAAGTTTGGGGTTGGCCTCGTCGGATATCGCCTGCGGAGACGGCGCA
AGGCTTCCCCGGGGTAACGAAGTCCAGGCGTTACATTCGGAAATTGTAGG
ACAGCCAGAGCTTGCGCCCGAGGCTGGAACTGAGGTGGTAGCGGTGGAAG
GTGGTGGTGGGGTGCGATTAGCAGCAAAGGGCCGGGCTATGATGGGTGGG
GGCGCGCTGAAGCCGTCGGGGTCGGTGCTGTTGAGCGAGAACAATGTGAT
CGAGTTTATCGACGTGCCTCTTGTGACGCCAACGGGGGAGGTGCTGATCG
AAGCCCTCTCCTTCAAGACTACCACTCGAGCGGCAGGATGATGCTCAATC
TATCATCAGCCCTGGGTCGCCTGGTTCTTGCCGGGCGCGAGCTGGCGAGA
TTGTCGGGCTTCAGCTCCCGCGTCACAGGACTGATCGACGTCATTGATGA
TGTCAACAGAGGTCTCTACAAGAAGGGCCGCCTTCCAAAGGACGCCGAGA
ACGCGTTAGTTGGCGTACCGAGCGCCGAAGCAGAAAATATAGCGACGTCG
GCCGCTGTGGCGGTGGCGGCCGAAGCTCGCGTGCGAGAAACGCCTCCCGT
TCGAAACGGGGTGGATGGGGTGAACCTTTCAACCGAAAATGCGCCGGCGT
GGACCCGTGCGAAGGTCAAAACGGTGCAGCCAGAAGCGCCCGCGGAGGTT
GGTAAGGACAATGCTCAGAGAGTAGCCGAAGACGGAAAAGAAAGTTTGGG
GTTGGCCTCGTCGGATATCGCCTGCGGAGACGGCGCAAGGCTTCCCCGGG
GTAACGAAGTCCAGGCGTTACATTCGGAAATTGTAGGACAGCCAGAGCTT
GCGCCCGAGGCTGGAACTGAGGTGGTAGCGGTGGAAGGTGGTGGTGGGGT
GCGATTAGCAGCAAAGGGCCGGGCTATGATGGGTGGGGGCGCGCTGAAGC
CGTCGGGGTCGGTGCTGTTGAGCGAGAACAATGTGATCGAGTTTATCGAC
GTGCCTCTTGTGACGCCAACGGGGGAGGTGCTGATCGAAGCCCTCTCCTT
CAAGGTGAAAGCGGGCATGAACGTTCTGGTCGCCGGCCCGAACGGTTCGG
GAAAGTCGAGCCTCTTTCGCGTGTTAGGCGGGCTGTGGCCTCTGGCGGGG
GGGACGTTGCTGAAGCCTCCCGGGTCAAGTCTCTTTTACGTGCCACAAAG
ACCGTACCTCGCGCTTGGGACACTTCGAGACCAGGTCATCTATCCACACA
CGCTGGAGAAGGTGAGCTGCGGGGGGGTGGGGGTGGCACATGTCGTCGGC
CAGGCTTCAACGGCATTAGCCGGCTTCCTGGTGAAAGCGGGCATGAACGT
TCTGGTCGCCGGCCCGAACGGTTCGGGAAAGTCGAGCCTCTTTCGCGTGT
TAGGCGGGCTGTGGCCTCTGGCGGGGGGGACGTTGCTGAAGCCTCCCGGG
TCAAGTCTCTTTTACGTGCCACAAAGACCGTACCTCGCGCTTGGGACACT
TCGAGACCAGGTCATCTATCCACACACGCTGGAGAAGGTGAGCTGCGGGG
GGGTGGGGGTGGCACATGTCGTCGGCCAGGCTTCAACGGCATTAGCCGGC
TTCCTG
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