prot_H-elongata_contig150081.3353.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150081.3353.1
Unique Nameprot_H-elongata_contig150081.3353.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
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BLAST of mRNA_H-elongata_contig150081.3353.1 vs. uniprot
Match: D7G382_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G382_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.690e-35
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 0 
Query:    1 MMGVKEQLLEGPANV-RWDDLQGEARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRIEVTRKCRESQLGEAQV 75
            M+GVKEQL EGPAN  RWDDL GEARR+AVARTHNVVFSQLASIAFNMLECGVDGARVR +VTRKCRESQLGEAQV
Sbjct:  963 MLGVKEQLQEGPANASRWDDLHGEARREAVARTHNVVFSQLASIAFNMLECGVDGARVRSDVTRKCRESQLGEAQV 1038
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BLAST of mRNA_H-elongata_contig150081.3353.1 vs. uniprot
Match: A0A6H5JSR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR7_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.280e-34
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0 
Query:    1 MMGVKEQLLEGPANV-RWDDLQGEARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRIEVTRKCRESQLGEAQV 75
            M+GVKEQL EGPA+  RWDDL GEARR+AVARTHNVVFSQLASIAFNMLECGVDGARVR +VTRKCRESQLGEAQV
Sbjct: 1226 MLGVKEQLQEGPASASRWDDLHGEARREAVARTHNVVFSQLASIAFNMLECGVDGARVRSDVTRKCRESQLGEAQV 1301
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150081.3353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G382_ECTSI2.690e-3589.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR7_9PHAE1.280e-3488.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150081contigH-elongata_contig150081:573..1093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150081.3353.1mRNA_H-elongata_contig150081.3353.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150081 573..1114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150081.3353.1 ID=prot_H-elongata_contig150081.3353.1|Name=mRNA_H-elongata_contig150081.3353.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
MMGVKEQLLEGPANVRWDDLQGEARRDAVARTHNVVFSQLASIAFNMLEC
GVDGARVRIEVTRKCRESQLGEAQV
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