prot_H-elongata_contig150022.3349.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150022.3349.1
Unique Nameprot_H-elongata_contig150022.3349.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A7S3XP68_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP68_HETAK)

HSP 1 Score: 80.9 bits (198), Expect = 1.730e-18
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    3 AITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQAVSQHT 51
            AI EIHNKNAS+LSFEELYRNAYNLVLHKHG+LLY+GVK+SV+   Q T
Sbjct:   33 AIDEIHNKNASALSFEELYRNAYNLVLHKHGELLYNGVKESVETHLQET 81          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: D7FT61_ECTSI (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT61_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.020e-18
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    2 TAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQA 46
            TAI EIHNKNASSLSFEELYRNAYNLVLHKHGDLLY+GV++SVQA
Sbjct:   33 TAIGEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYAGVRESVQA 77          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: F0YK27_AURAN (Cullin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK27_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 8.290e-16
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 RTAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQ 45
            R A++EI+NKNAS LSFEELYRNAYNLVLHKHGDLLY GV+++V+
Sbjct:   31 RLAVSEIYNKNASVLSFEELYRNAYNLVLHKHGDLLYDGVQETVE 75          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: F0YHJ9_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ9_AURAN)

HSP 1 Score: 76.3 bits (186), Expect = 6.530e-15
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 RTAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQ 45
            R A++EI+NKNAS LSFEELYRNAYNLVLHKHGDLLY GV+++V+
Sbjct:   31 RLAVSEIYNKNASVLSFEELYRNAYNLVLHKHGDLLYDGVQETVE 75          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A7S2BTZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTZ8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.990e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 TAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQ 45
            +AI EIHN+NAS+LSFEELYRNAYNLVLHKHG+LLY GV + VQ
Sbjct:   99 SAIHEIHNQNASALSFEELYRNAYNLVLHKHGELLYKGVCKCVQ 142          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A835Z7J2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.110e-14
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    3 AITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQA 46
            AI EIHNKNAS LS+EELYRNAYNLVLHKHG+LLY+ V++S++A
Sbjct:   36 AIDEIHNKNASELSYEELYRNAYNLVLHKHGELLYANVRESLRA 79          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A7S2R1Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1Y8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.480e-14
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    3 AITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSV 44
            A+ EIHN+NASSLSFEELYRNAYNLVLHKHG+LLYSGV   +
Sbjct:   34 AMDEIHNRNASSLSFEELYRNAYNLVLHKHGNLLYSGVTDKI 75          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A7S2LRU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LRU3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.250e-13
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    2 TAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQ 42
            +A+ EIHN+NAS+LSFEELYRNAYNLVLHKHG+LLY G+ +
Sbjct:   43 SAMDEIHNRNASTLSFEELYRNAYNLVLHKHGNLLYEGITE 83          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A7S3NMJ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMJ6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.480e-13
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 RTAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQ 45
            R AI EI N NAS LSFEELYRNAYNLVLHKHGDLLY GV+ ++Q
Sbjct:   80 RGAIEEIFNHNASMLSFEELYRNAYNLVLHKHGDLLYKGVQSTIQ 124          
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Match: A0A6U3TH84_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TH84_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.480e-13
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    3 AITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQA 46
            AI EIHN+NAS LSFEELYRNAYNLVLHKHGDLLY GV   + +
Sbjct:   90 AIDEIHNRNASLLSFEELYRNAYNLVLHKHGDLLYEGVSDKMSS 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150022.3349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XP68_HETAK1.730e-1879.59Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7FT61_ECTSI5.020e-1891.11CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
F0YK27_AURAN8.290e-1677.78Cullin domain-containing protein (Fragment) n=1 Ta... [more]
F0YHJ9_AURAN6.530e-1577.78CULLIN_2 domain-containing protein n=1 Tax=Aureoco... [more]
A0A7S2BTZ8_9STRA7.990e-1579.55Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835Z7J2_9STRA3.110e-1477.27Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S2R1Y8_9STRA7.480e-1480.95Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2LRU3_9STRA1.250e-1375.61Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3NMJ6_9STRA1.480e-1377.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6U3TH84_9STRA1.480e-1377.27Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1310.10coord: 1..52
e-value: 3.2E-15
score: 58.7
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 2..45
NoneNo IPR availablePANTHERPTHR11932:SF135coord: 2..45
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 1..48
e-value: 2.4E-12
score: 46.3
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150022contigH-elongata_contig150022:1129..1284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150022.3349.1mRNA_H-elongata_contig150022.3349.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150022 1129..1284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150022.3349.1 ID=prot_H-elongata_contig150022.3349.1|Name=mRNA_H-elongata_contig150022.3349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
RTAITEIHNKNASSLSFEELYRNAYNLVLHKHGDLLYSGVKQSVQAVSQH
TR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001373Cullin_N
IPR016159Cullin_repeat-like_dom_sf