mRNA_H-elongata_contig15000.3348.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: D7G934_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G934_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 8.750e-133 Identity = 210/261 (80.46%), Postives = 231/261 (88.51%), Query Frame = 3
Query: 555 VDTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFLLPAAEAAA 1337
+DTVKALRRAGKRTFFVTNN+SKSRRQYC+KLEGFGV GVGVEDIVTSGSA+AAYVK +HPDV TVYM+G G EEEL +VGL+VVKE RP GMTEDEFR DPEVGAVVVGLDT+FGFRQLCVAS+YIQ GA+F+GTNPDVADRVGSLLMPGTGP+L SIQ+ASGVAPVVVGKPNPLL+RQLMD NGL AS T+MVGDRLDTD+ FGNA GVSSALVLTGVSE +DVVGL AGG+ TPTY++E L LLPAA AA
Sbjct: 52 LDTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFGVHGVGVEDIVTSGSAIAAYVKLSHPDVQTVYMIGEEGLEEELEMVGLRVVKEEARPAPGMTEDEFRENVTDPEVGAVVVGLDTSFGFRQLCVASSYIQSGAHFLGTNPDVADRVGSLLMPGTGPMLTSIQTASGVAPVVVGKPNPLLIRQLMDQNGLAASKTLMVGDRLDTDIMFGNAGGVSSALVLTGVSEMSDVVGLQAGGDKTPTYLLERLGALLPAATEAA 312
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A836CPG6_9STRA (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG6_9STRA) HSP 1 Score: 250 bits (638), Expect = 9.040e-73 Identity = 137/257 (53.31%), Postives = 174/257 (67.70%), Query Frame = 3
Query: 555 VDTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAG-GESTPTYIMENLAFLLPA 1322
V+T+ ALR AGKR F+TNN+SKSRRQY K FGV V DIVTSGSA+A Y+K + Y++G G EEL L G+ +++A M+E EF E DP+V AV VG D +FGFRQ+ +AS Y+Q+G F+G NPD ADRVG LL PGTGPLLA+IQSASG PV++GKPNP+L++ ++ G+D + T MVGDRLDTD+ F NA G+SS LV+TGVS AD+ L A P ++M LA L PA
Sbjct: 61 VETLDALRAAGKRVLFITNNSSKSRRQYAAKFAAFGVS-VDPNDIVTSGSAMANYLKME--GITYAYVIGEDGLIEELELAGVTCIRDAKGAGPLMSESEFMALELDPKVQAVCVGWDRSFGFRQMSIASAYLQQGVGFIGANPDNADRVGPLLFPGTGPLLAAIQSASGAVPVIIGKPNPILIKGILAQFGMDQARTAMVGDRLDTDMAFANAGGISSVLVMTGVSTDADLAALSAERAHMAPAFVMAALASLRPA 314
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: C1ECJ4_MICCC (Phosphoglycolate phosphatase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1ECJ4_MICCC) HSP 1 Score: 167 bits (423), Expect = 5.450e-43 Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 3
Query: 516 DCHIFDARLTLCQVDT--------VKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAP-VVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGV-SSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFLL 1316
DC + D L Q DT ++ LR GKR FVTNN++KSRRQY K E G+ V E++ ++ A AAY+K ++G G +EL + L+V + TE ++ + DP+ GAV+VG DT+F + +L AS IQ+GA FV TNPD D +G LMPG G ++A+++ ASGV+P + GKP+ LL +L+ N +D + T++VGDRLDTD+ FG A G ++ L L+GV DV G P +I+++L +L
Sbjct: 2 DCIVMDCDGVLWQGDTLLPGVRESIQLLREMGKRLVFVTNNSNKSRRQYVHKFEKLGIF-VEKEEVFSAAFAAAAYLK-TQKFAKKAMVIGGQGIVDELNEMYLEVDPGVFNA-VQCTEMDWEELDIDPDCGAVIVGQDTSFTYAKLAYASLAIQRGAVFVATNPDAGDAIGPGLMPGAGAIVAAVEKASGVSPEIYAGKPSAFLL-ELLKGNRVDMARTLVVGDRLDTDIAFGRAGGAGATVLTLSGVCGLEDVDAAMEEGGDIPNHIVQSLPHML 274
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A5J4YYA0_PORPP (Phosphoglycolate phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYA0_PORPP) HSP 1 Score: 167 bits (423), Expect = 5.280e-42 Identity = 103/268 (38.43%), Postives = 147/268 (54.85%), Query Frame = 3
Query: 558 DTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKE-----------ATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGS-LLMPGTGPLLASIQSASG-VAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFLLPA 1322
D VK LR G RT FVTNN SRR Y KL+ G+D +DIVTSGSALA+YVK H D+ T Y++G G EEL VG++ + A + DE + + V +G D F ++ AS ++QKGA F+ TN D D+ S LMPGTGP++ +++ A+G A V+GKP+ LL+ ++ G++ + +MVGDRLDTD+ F G+ S LVLTG + ++ L P ++ +LA + A
Sbjct: 92 DAVKELRARGIRTIFVTNNVRFSRRGYAQKLKRNGID-ARPDDIVTSGSALASYVKSKHSDIKTAYVIGEPGLVEELESVGIRCFRHDASTEMDEALFANLSDMSKRTDEDKQMQLPERCDLVAIGWDLQFSMAKMSYASFFVQKGALFLATNLDAQDKSASGYLMPGTGPMVGALECATGRAADAVIGKPSALLIETILTEFGVERADAMMVGDRLDTDILFAKNGGIGSVLVLTGCTTEQELAELDPSDIRRPDHVFPSLAHYVAA 358
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A388K1M7_CHABU (Phosphoglycolate phosphatase (PGPase)-like protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K1M7_CHABU) HSP 1 Score: 161 bits (407), Expect = 3.490e-40 Identity = 104/260 (40.00%), Postives = 154/260 (59.23%), Query Frame = 3
Query: 555 VDTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMT-EDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGAN--FVGTNPDVADRVGS-LLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGEST--PTYIMENLAFLL 1316
++T+ LR GKR FFVTNNA+KSR+ Y K + G+ + E+I T+G A AAY+K T +++G+ G EEEL L G+K + P G ED DPEVGAV+V LD + ++ A++++++ N FVGTNPD S +++PG G LLA++++ +G VVGKP PL+L ++ + LD T MVGD L TD+ FG G++S LV++GV+ AD A ES P +++E+ A +L
Sbjct: 53 IETLSFLRSQGKRLFFVTNNATKSRKDYLKKFQRLGIYALP-EEIYTAGYAAAAYLKSLGFK-KTAFVIGASGLEEELTLAGIKWIGGTEYPIAGPALEDVASSINCDPEVGAVIVSLDWRCTYEKIAQAASFLRRDKNCVFVGTNPDPKLNTASGVVLPGAGSLLAAVETTTGRKASVVGKPEPLMLDLMVAEHRLDRRRTGMVGDALTTDIPFGKRGGLTSILVMSGVTTRADFEAHRASKESGVHPDFVLESAADIL 310
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A7S0ANX3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ANX3_9DINO) HSP 1 Score: 161 bits (408), Expect = 3.780e-40 Identity = 106/257 (41.25%), Postives = 149/257 (57.98%), Query Frame = 3
Query: 558 DTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAH---PDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPD-PEVGAVVVGLDTAFGFRQLCVASTYIQKGAN---FVGTNPDVADR-VGSLLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENL 1304
D V+ L+R+GKR FVTN ++++R ++ V D+VTSGS AA V AH +++G+ G EEL L G+ VV+ + P+ E FR P V AVVVG D AF + L AS ++Q+G +GTNPDVA+R L+P G L+A++++AS +VVGKP+P ++RQL++ +GL A ++VGDRLDTDV+FG AG + LVLTGVS + LP PTYI + L
Sbjct: 91 DAVRRLQRSGKRLAFVTNASARTRAAVAKRISSLLGTPVPASDVVTSGSVAAAAVA-AHGGGAGAANAFVIGAEGLREELRLAGVFVVEPSL--PMPFDEVAFRSLASTLPPVTAVVVGHDEAFSYATLAAASLFLQRGGEECLLIGTNPDVANRDTAGYLVPEAGSLIAAVEAASSRNAIVVGKPSPEVIRQLLERHGLKAEEVLVVGDRLDTDVRFGAGAGARTCLVLTGVSTREEAEALPFSDR--PTYIRDRL 342
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A7S0CUU7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CUU7_MICPS) HSP 1 Score: 160 bits (406), Expect = 7.560e-40 Identity = 112/284 (39.44%), Postives = 160/284 (56.34%), Query Frame = 3
Query: 516 DCHIFDARLTLCQVDT--------VKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAP-VVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVS-SALVLTGVSEAADV---VGLPAGGES----TPTYIMENLAFLL 1316
DC + D + Q DT + LR GKR FVTNN++KSR+QY K E G+ V E+I ++ A AAY+K ++VG G +EL + ++V + TE ++ D +VGAV+VG D AF + +L AS IQ+GA FV TNPD AD +G +MPG G ++A++++ASGV+P + GKP+ LL +L+ N +D S T++VGDRLDTDV FG A G + L L+GVS DV + GE P +I++ L +L
Sbjct: 21 DCIVMDCDGVIWQGDTLLPGARESIALLREQGKRLVFVTNNSNKSRKQYVYKFEQLGI-AVEKEEIFSAAFAAAAYLK-TRKFAKKAFVVGGRGIVDELNDMQIEVDPGVFNA-VQCTETDWEDMFLDDDVGAVIVGQDVAFTYAKLAYASLAIQRGAAFVATNPDAADALGPGMMPGAGAIVAAVETASGVSPEMYAGKPSAFLL-ELLKGNHVDMSRTLVVGDRLDTDVAFGKAGGAGVTVLTLSGVSTLDDVDEAIEAQRAGEEDAPPVPDFIVQGLPQML 300
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A2R5G460_9STRA (Glycerol-3-phosphate phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G460_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.220e-38 Identity = 102/258 (39.53%), Postives = 138/258 (53.49%), Query Frame = 3
Query: 555 VDTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTG----PLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFLL 1316
V+ V +R AGKR FVTNN++KSR+ Y K E +GV VE I TSGSA A K V+ +G G EE VG++ V+ ++ GM E EF + + V AVVVG D F FR+LC+AS YIQ GA + T D +D+VG MPG G + S+ G V GKPN L+ +++ S T+MVGDRLDTD+KF S LVL+G + + + + PT++ +LA L
Sbjct: 32 VEAVSRMRAAGKRVVFVTNNSTKSRQAYLDKFEALKFEGVEVEHINTSGSAAAELCKLGGHK--KVFAIGEPGLMEEFKAVGVETVEVSSDAKTGMDEAEFENAKLEEGVSAVVVGWDRNFSFRKLCLASLYIQAGAKLIATGLDPSDKVGGKSMPGNGCNVNAIQYSVDDPQGEHTTVAGKPNSHLMENILNKYNFTGSETLMVGDRLDTDIKFAEGQ-AKSLLVLSGCTP---IEEYESRTDVKPTHVAADLATAL 283
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A2H5WQ68_9BACT (Acid sugar phosphatase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5WQ68_9BACT) HSP 1 Score: 154 bits (388), Expect = 3.930e-38 Identity = 95/255 (37.25%), Postives = 144/255 (56.47%), Query Frame = 3
Query: 555 VDTVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAHPDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEV-GAVVVGLDTAFGFRQLCVASTYIQKGANFVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFLL 1316
V T+ LR AG++ FF+TNN+ +R QY KL G+ E ++TSG A A Y+K+A P+ +++VG G +EEL G +++ PD + AVVVG+D +F + +L A I +GA F+ TN D L+PG G ++A+I +A+G P+++GKPNP +L L+ + +T++VGDRLDTD+ N + SALVLTGV++ DV P E PT+++ +L LL
Sbjct: 38 VTTLNLLREAGRQIFFLTNNSGATREQYAHKLTAMGIP-TTPEQVITSGWATALYLKKALPNAK-LFVVGEPGLKEELASHGFPLIE-----------------NPDETLPDAVVVGIDRSFDYTRLAQAQYAILEGARFIATNADPTYPAEHRLLPGAGAIVAAIATATGRKPILIGKPNPEILAPLIQAQRIHPQTTLLVGDRLDTDIALANHLHIPSALVLTGVTQRNDVECAPL--ELLPTWVLNHLGELL 271
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Match: A0A1X6MPQ1_9APHY (4-nitrophenylphosphatase n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MPQ1_9APHY) HSP 1 Score: 154 bits (388), Expect = 5.790e-38 Identity = 100/278 (35.97%), Postives = 149/278 (53.60%), Query Frame = 3
Query: 516 DCHIFDARLTLCQVD--------TVKALRRAGKRTFFVTNNASKSRRQYCLKLEGFGVDGVGVEDIVTSGSALAAYVKRAH--PDVHTVYMVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLDTAFGFRQLCVASTYIQKGAN--FVGTNPDVADRVGSLLMPGTGPLLASIQSASGVAPVVVGKPNPLLLRQLMDLNGLDASSTIMVGDRLDTDVKFGNAAGVSSALVLTGVSEAADVVGLPAGGESTPTYIMENLAFL 1313
D +FD L Q D + LRR+GK+ FFVTNNA+KSR+ Y K + GV+ V+++ S A A Y+ P VY++G G EEEL G+ + + E + F PDP VGAV+ GLDT+ + +L A TY+++ A+ F+ TN D L+PG G + A + A G P+ +GKP +L + D + TIMVGDRL+TD++FG G+++ LVLTG+++ ++VVG P + P Y ++ L
Sbjct: 19 DTWLFDCDGVLWQGDRLIEGVPEVLSLLRRSGKKIFFVTNNATKSRKNYKKKFDQLGVE-AQVDEVFGSAYASAVYISSVMKLPKDKKVYVIGMKGLEEELDEEGIAHIGGTDPADNTLAEFHLKHFTPDPAVGAVLCGLDTSINYTKLSKAFTYLRRNADCVFLATNTDSTYPSAEGLLPGAGSISAPLACALGRQPLSIGKPAATMLDCIKAKYQFDPTRTIMVGDRLNTDIEFGKRGGLATLLVLTGITQESEVVG-PEASSTVPDYFTNSIGDL 294 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15000.3348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15000.3348.1 >prot_H-elongata_contig15000.3348.1 ID=prot_H-elongata_contig15000.3348.1|Name=mRNA_H-elongata_contig15000.3348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp MVGSGGQEEELGLVGLKVVKEATRPPIGMTEDEFRVFEPDPEVGAVVVGLback to top mRNA from alignment at H-elongata_contig15000:1361..5678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15000.3348.1 ID=mRNA_H-elongata_contig15000.3348.1|Name=mRNA_H-elongata_contig15000.3348.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4318bp|location=Sequence derived from alignment at H-elongata_contig15000:1361..5678- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15000:1361..5678- >mRNA_H-elongata_contig15000.3348.1 ID=mRNA_H-elongata_contig15000.3348.1|Name=mRNA_H-elongata_contig15000.3348.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig15000:1361..5678- (Himanthalia elongata Himel1 dioecious)back to top |