prot_H-elongata_contig14981.3333.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14981.3333.1
Unique Nameprot_H-elongata_contig14981.3333.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length419
Homology
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BLAST of mRNA_H-elongata_contig14981.3333.1 vs. uniprot
Match: D8LF97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF97_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.120e-36
Identity = 77/169 (45.56%), Postives = 115/169 (68.05%), Query Frame = 0 
Query:   24 FSHELKSGVSALLHLRVGDVEPVTLRLEDGDTDRLIIKTNREGWRAWCCGCRNRYYDLGTGHLEPLPRRIHSIKLSSSVKKISAGDEEVIENMLKRSLSLLRRYPTAESIDLTFPSLDMEERLRMWADRRLTI--DSSKELRRSSRIIRAALEGRSPSEETDTATVGSD 190
            F+++LKSGV  +LH++VG +EP +++L D + ++L+IKT REGW +WC  C NR Y+L  G LEP+  R H+++L+ S   ++ GD     +ML+RSLSLLRR+P  ESIDLTF +  +EE LR+W  +RL +   +S   R SS+ +  AL+G  PSE++D  T  S+
Sbjct:   11 FTNQLKSGVPVMLHVKVGKLEPGSIQLVDEENEKLVIKTLREGWCSWCY-CYNRRYELSPGQLEPVENRTHTMRLNRSTVLLNGGDSHNTASMLRRSLSLLRRHPHPESIDLTFATPKLEESLRLWVHKRLAVVNPASSLPRESSKRVVQALQGLRPSEDSDVETAYSE 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14981.3333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF97_ECTSI2.120e-3645.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14981contigH-elongata_contig14981:1860..6453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14981.3333.1mRNA_H-elongata_contig14981.3333.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14981 1739..7490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14981.3333.1 ID=prot_H-elongata_contig14981.3333.1|Name=mRNA_H-elongata_contig14981.3333.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=419bp
MDEGCFEGSLDPARESLSSSRCLFSHELKSGVSALLHLRVGDVEPVTLRL
EDGDTDRLIIKTNREGWRAWCCGCRNRYYDLGTGHLEPLPRRIHSIKLSS
SVKKISAGDEEVIENMLKRSLSLLRRYPTAESIDLTFPSLDMEERLRMWA
DRRLTIDSSKELRRSSRIIRAALEGRSPSEETDTATVGSDVDQSRYSLSV
EDPASVRPDPLVRAALVYPATARGERRGSYAQLRSQSQRMATRRSSNFYD
TPGIEEENKDKDGYKLPTLRKMESARDRRGGRGQGQWSPAAAGGASLSPG
SASSRGSQLSLRRAVTAESRSSGPRSESGPKGDFWDPLGLLSDLESTSPP
PPLSTKSLSMSASSGQSMPLHGDADDMARKPLLAESTELESPAPLYPQVA
ASLTPPKEGDEHKNGHTE*
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