mRNA_H-elongata_contig1498.3332.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1498.3332.1
Unique NamemRNA_H-elongata_contig1498.3332.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: D8LCX6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX6_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 7.270e-134
Identity = 208/278 (74.82%), Postives = 235/278 (84.53%), Query Frame = 1 
Query:    1 QGMMLKSKFIRTLRQIEKEAIQAPSAKAGANPLSDKELSEIVDEFADKG-------NPDSKGEKKILYDDFVDMLVVGSPRSSAVGKDK-KLIPKRRMSMTMILPEGPVRRPRNQPPPTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTV---ASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTLNLFATAY 801
            +G + ++KFIRTLRQIE EAIQAPSAKAGA PLSD+EL+E+V EF+ +G       NP S+ E K+LYDDFVDMLVV SPR    G+ K +  PKRR+SM+M+LPEGPVRR R QPPPTVH+YLNKMNAE FD++GDT KQLARAM+AFSSSFAR NRRKLLRKHFLAFDVNNT RI+R QF +TV   ASEFFIDFD RNK+LLA+FFFPK   EHGR+EYETLLEIITARDVRRA AFRQQTA EGAD+DELFTG+DNT RKRDFGGTLNLFATAY
Sbjct:    2 KGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGDGGSNPNPGSRAENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK---EHGRVEYETLLEIITARDVRRARAFRQQTAEEGADFDELFTGVDNTARKRDFGGTLNLFATAY 276
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A6H5JLQ4_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ4_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.460e-77
Identity = 202/569 (35.50%), Postives = 232/569 (40.77%), Query Frame = 1 
Query:    1 QGMMLKSKFIRTLRQIEKEAIQAPSAKAGANPLSDKELSEIVDEFADKG-------NPDSKGEKKILYDDFVDMLVVGSPRSS-------------------------------------------------------AVGKDKKLI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKRRMSMTMILPEGPVRRPRNQPPPTVHTYLNKMNAEV-------------------------------------------------------------------FDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTV---ASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTL 780
            +G + ++KFIRTLRQIE EAIQAPSAKAGA PLSD+EL+E+V EF+ +G       NP S+GE K+LYDDFVDMLVV SP ++                                                        V ++ KL                                                                                                                                                                                  PKRR+SM+M+LPEGPVRR R QPPPTVH+YLNKMNAE                                                                    FD++GDT KQLARAM+AFSSSFAR NRRKLLRKHFLAFDVNNT RI+R QF +TV   ASEFFIDFD RNK+LLA+FFFPK   EHGR+EYETLLEIITARDVRRA+AFRQQTA EGAD+DELFTG+DNT RKRDFGGTL
Sbjct:   94 KGAIGETKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGDGGSNPNPGSRGENKVLYDDFVDMLVVASPSTAKLKDRGAKASMKVEDRILKVMYLHYEENPKASRLRSAFRRHDKEREGTVKQSQWVVVLRETKLSSVMTRQVAEAICLEHDTRADGTLDYAALCDDIFPGDFDHYSHQQHFVYKDQCLGSIVLDSAKDPDGEELQEDATKATSPNAQWASSASDXXXXXXXXXXERPECDDSLKGSGSSSGFSGSVASVPRSGSRGSVGSRDSVGGPSGDRRPGERCSTADAALGXXXXXXXXRGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAETXHRRRPKAIRRLFGCRTDPRFLCFVYKVVDRSFQGWGGATQETEXXXXXXXXXXXXRKESGDVRAREFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK---EHGRVEYETLLEIITARDVRRAHAFRQQTAEEGADFDELFTGVDNTARKRDFGGTL 659
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S3YGW2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGW2_HETAK)

HSP 1 Score: 119 bits (297), Expect = 1.820e-29
Identity = 68/137 (49.64%), Postives = 89/137 (64.96%), Query Frame = 1 
Query:  391 RKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFA---DTVASEFFIDFDDRNKELLASFFFPKASMEHGR-IEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTLNLF 789
            R+ +  AM AFSS+FAR  R+K+LRKHF+AFD   TG++ R+ F    D VA+EFFIDFD+R+K +L  +FFP     HG  ++Y+ LL  I  RD RRA A R Q   +    + LF   D  +R+RDFGGTLNLF
Sbjct:   49 RRTVVEAMCAFSSAFARMQRKKMLRKHFMAFDTRKTGKVGRKMFEHSIDEVAAEFFIDFDERDKGVLGDYFFPS----HGSAVDYDQLLATICLRDFRRAQALRAQVLEDDDTREHLFIKND-LSRQRDFGGTLNLF 180
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S2CTV8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTV8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.930e-23
Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 1 
Query:  328 PTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQF---ADTVASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQ 693
            PT+ TYL ++N ++    GD  KQL RAMRAFS SFART+R+KLLRK+ +++D+ NTGR+++  F    D   SE F++ D    + LASFFFP+ ++    ++YE LLE+I +RD+ +A+  R+
Sbjct:  670 PTMRTYLKEVNEQLAACGGDESKQLERAMRAFSCSFARTHRKKLLRKNMISYDLGNTGRLDKVAFLRSVDKCVSEGFVELDVEQTQRLASFFFPQPTVNF--LDYEVLLEVICSRDLGQAFEMRE 792
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN)

HSP 1 Score: 89.4 bits (220), Expect = 2.160e-16
Identity = 52/138 (37.68%), Postives = 79/138 (57.25%), Query Frame = 1 
Query:  328 PTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTVA---SEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELF 732
            PTV  YL+K+N  + D +GD +K+L   +RAFSS+F R +R+K+LRKH +AFDV+NTG  +R++F  +V     + + + D R + LL    FP       R   +TLL ++ +RDV+      Q    +  D   LF
Sbjct: 1270 PTVRNYLDKVNVTMRDCDGDVQKKLKNCLRAFSSAFGRNHRKKMLRKHLMAFDVSNTGTCHRDEFVGSVKRIIDDGYCELDTREQTLLFQHIFPHP---WTRQPTDTLLTMLVSRDVKGVMRMHQAAMKQEEDPRFLF 1404
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BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S1U9B2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9B2_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.550e-5
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1 
Query:  409 AMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQF---ADTVASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFR 690
            +M  F+S FAR +R++ LRKH +A+DV+ TGR+ R +    A  VA E   D +    E + SFFFP    E   +  +  L     RD+  A A R
Sbjct:  428 SMTVFASLFARADRKRFLRKHLMAYDVDRTGRMKRSELVSAAQHVADECDFDLNFATLEPMLSFFFPDT--EAWELPLDDTLNAAFKRDMDAAAALR 522
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LCX6_ECTSI7.270e-13474.82EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JLQ4_9PHAE1.460e-7735.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3YGW2_HETAK1.820e-2949.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CTV8_9STRA4.930e-2345.60Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YC17_AURAN2.160e-1637.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1U9B2_9STRA5.550e-537.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1498contigH-elongata_contig1498:7616..13217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.9
Seed ortholog evalue9.7e-16
Seed eggNOG ortholog44056.XP_009038083.1
Preferred nameUSP39
KEGG koko:K12847
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008380,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0010498,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016579,GO:0016740,GO:0016787,GO:0019538,GO:0019783,GO:0019787,GO:0019941,GO:0022607,GO:0022613,GO:0022618,GO:0030163,GO:0031146,GO:0031974,GO:0031981,GO:0032446,GO:0034622,GO:0034641,GO:0036211,GO:0036459,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0051603,GO:0065003,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.alpha-tubulin binding
EggNOG OGsKOG0043@1,KOG0043@2759,KOG2026@1,KOG2026@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_001430.1
Exons7
Model size804
Cds size798
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1498.3332.1prot_H-elongata_contig1498.3332.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1498 7616..13211 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929885.7976534-CDS-H-elongata_contig1498:7615..76391622929885.7976534-CDS-H-elongata_contig1498:7615..7639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 7616..7639 -
1691679195.4464636-CDS-H-elongata_contig1498:7615..76391691679195.4464636-CDS-H-elongata_contig1498:7615..7639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 7616..7639 -
1622929885.8157923-CDS-H-elongata_contig1498:8698..88661622929885.8157923-CDS-H-elongata_contig1498:8698..8866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 8699..8866 -
1691679195.4614732-CDS-H-elongata_contig1498:8698..88661691679195.4614732-CDS-H-elongata_contig1498:8698..8866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 8699..8866 -
1622929885.8267493-CDS-H-elongata_contig1498:9157..92381622929885.8267493-CDS-H-elongata_contig1498:9157..9238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 9158..9238 -
1691679195.4703312-CDS-H-elongata_contig1498:9157..92381691679195.4703312-CDS-H-elongata_contig1498:9157..9238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 9158..9238 -
1622929885.8375473-CDS-H-elongata_contig1498:9604..97691622929885.8375473-CDS-H-elongata_contig1498:9604..9769Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 9605..9769 -
1691679195.4791393-CDS-H-elongata_contig1498:9604..97691691679195.4791393-CDS-H-elongata_contig1498:9604..9769Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 9605..9769 -
1622929885.8481514-CDS-H-elongata_contig1498:10020..101651622929885.8481514-CDS-H-elongata_contig1498:10020..10165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 10021..10165 -
1691679195.4884858-CDS-H-elongata_contig1498:10020..101651691679195.4884858-CDS-H-elongata_contig1498:10020..10165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 10021..10165 -
1622929885.8683794-CDS-H-elongata_contig1498:12521..126341622929885.8683794-CDS-H-elongata_contig1498:12521..12634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 12522..12634 -
1691679195.5033362-CDS-H-elongata_contig1498:12521..126341691679195.5033362-CDS-H-elongata_contig1498:12521..12634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 12522..12634 -
1622929885.8785582-CDS-H-elongata_contig1498:13109..132111622929885.8785582-CDS-H-elongata_contig1498:13109..13211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 13110..13211 -
1691679195.5160723-CDS-H-elongata_contig1498:13109..132111691679195.5160723-CDS-H-elongata_contig1498:13109..13211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1498 13110..13211 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929885.892366-UTR-H-elongata_contig1498:13211..132171622929885.892366-UTR-H-elongata_contig1498:13211..13217Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1498 13212..13217 -
1691679195.5263646-UTR-H-elongata_contig1498:13211..132171691679195.5263646-UTR-H-elongata_contig1498:13211..13217Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1498 13212..13217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1498.3332.1

>prot_H-elongata_contig1498.3332.1 ID=prot_H-elongata_contig1498.3332.1|Name=mRNA_H-elongata_contig1498.3332.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MMLKSKFIRTLRQIEKEAIQAPSAKAGANPLSDKELSEIVDEFADKGNPD
SKGEKKILYDDFVDMLVVGSPRSSAVGKDKKLIPKRRMSMTMILPEGPVR
RPRNQPPPTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRK
LLRKHFLAFDVNNTGRINREQFADTVASEFFIDFDDRNKELLASFFFPKA
SMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTR
KRDFGGTLNLFATAY*
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mRNA from alignment at H-elongata_contig1498:7616..13217-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1498.3332.1 ID=mRNA_H-elongata_contig1498.3332.1|Name=mRNA_H-elongata_contig1498.3332.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5602bp|location=Sequence derived from alignment at H-elongata_contig1498:7616..13217- (Himanthalia elongata Himel1 dioecious)
CAGGGGATGATGCTTAAGTCCAAGTTCATCCGTACATTGAGACAAATTGA
AAAGGAAGCCATTCAGGCACCCTCTGCCAAGGCGGGTGCCAACCCACTTT
CCGACAAGGTGAACTGTCACATGTGGTATTCATTTTAAATTGTTCACACA
AGTTTTGAGAGAAAGAGGACCTCTACAACTTACAAGAAGAGAGTTTTTTT
ACACAGGCATGATGAACGACTTATCTTGGGGACAATACTTCGTTCGCCAA
ACATCGAGCAACGTTTAAATTGTGACATGGACGGTACTTGGCTTACACGA
CAAAATTATATTTTACCTCAGTCGGTCGGTTATCCCTCAAACAAACGCCT
TTTAACGGACGATGTGAAAACTCTTCGAGCACAGTCCATCACCCTTCTAA
CACCCCCAAATGATCAAGGATCAAGGGAAGACGAGTCTGGACGGTAGACA
ACATTACAGACGTGGAGGACGAATATCGAGCACTCTGTGAATGTTACCCC
AAGTCTGTTTTAGTCCCGAAGGTTCACGTCTCGTTAAAACACGCCTCATG
AGTCCGCGTCTTTGTCTGTGTGGATACAAGCAGGAGCTGTCCGAGATCGT
GGATGAATTTGCAGACAAGGGTAATCCAGACTCCAAAGGAGAAAAAAAGA
TCCTGTATGACGACTTCGTTGACATGCTGGTCGTCGGTTCTCCCAGGTAA
GACCCATGTTTTATTGGCATCCGAGAACTTAAATTTACCGGCCCCGCTTT
TTGATCTCGTACGGCAAATGAGTGGAGGGTGAAATTGCGACTTTTCACGG
ACCTGTTTGGACGGGCGCCGCACGCGCTTGGACCGGCAGGTGCCGGAATG
CTTCACGAAAACGCCTCTAGTATATTTTTGCTATCGAAACACGTCGAAAA
TATAGTCAGGGTGAGCTTGACCAGACTCCGCCCCCTCTCCCCGAACGTGC
TTAAAAGTACCTCAAAGCTTAAGGACCGCGGGGCTAAGGCGTCGATGAAA
GTTGAAGATCGTATTCTGAAGGTCATGATCCTACACTACGAAGAAAACCC
GAAGGTGCTTGCATATATACTGATCAATAACATTAAAAGTTTGAGGTCCG
GTGTAGCACGCGTTTAGCGTAGACAGGGATTATATGGCAGCGCGGGTGAT
ATGTGGCTGTGTCATAGTAGTTGAGATTAAAGGGACCCGAAATGAACTGA
ATTAGATGGGGCACCTCGTCATGCGATAGAGGGAAATATCCAGGTATCCC
AGCACAGACATCCAAAAGGTGACAATGTAAACCTAAATCTACTTCCTATT
GGTCACACTAAATGCAATATATTATCATATAAGAGTAGTATAACTTTATC
AGCCCCCCAGGCGAGTGATCGGGTAGATACTCAGTGATCGCCCCCCTGCT
TCATCTTAGAATATTTGGTTATGGCCCCCCAGATTAGTACGTATGCGAGG
ATATATTTGCGATCCTCCTTCCGTACTCATCATAGCTTCCATAAAATGTA
GTTCCATGTAAACAGCAATGACAGCCCCCATAAATCTGAATATTGGTACA
GTCCTTCAACATACAAGATCACATTCAAAATTCAATCAGTCGTGTTCGAA
CTCAATCTCCAATCATCCAAATAAAATTCGGCTAATAGCGAAAAAAGCAA
TATTAATCTGCTACATTGTTGATCAACTTTACCTAAAAATCCGGCGAATG
GCGAATAGCGAATACACTCTACAAACTAATTTATCACGTACTTGCTCTGC
TAGTGTGATCAACAAGATCAATAGTTTGAGATCCGATGTAGCACGCGTGA
AGCGTTGATAGGGATTACATGGTAGCGCGGGTGATATGTGGCTATGTCAT
AGTAGTTGAGATTAGAGGGACCTGAAATGAATTGAATTAGATGGGGTACC
TCGTCCATAGGATGGAGGGAAAATATCCCGGTATCTCAGCACAGACATCC
AACAGGTGACAATATGAACCTAAATCTACTTCCTATTGGTCACGCTAAAT
GTAATCTATCCGCATCTAAGACTCTTACTTTATAATATACACAGACACAA
GCTAGGAATGTTTTCAGCCCGTGCCTCGGGTCTAGCCATATTTCGGCATG
AAAGTCGGGGAGACGAACCTCAACATTACCTAATGAAGTCAACCTCCTCT
CTTGCGTTTTGCGCTCCTACGCCCTGGCTGCCAACCATTCCGCCAATCTG
ATTTGACAGGCTAGCCGACTCCGTGCCGCGTTCCGAAAACACGACAAGGA
GTGCACCGGCACCGTGCAGCCGTCACAGTGGGTTGTTGTCCTCAGGGAGA
CCAAGCTTAGTTCCGTCATGACTCGGCAGGTTGCCGAGGCAATTTGCCTC
GAGCACGACACCAGGGCGGACGGCACGCTCGATTACGCCTCCTTCTGTGA
CGAAATCTTCGCGGGAGACTTCGACCACTACGCCCACCAGCAGCACTTCG
TCTATAAGGTAAGGTTTTGAGAGTGCCGTGCATTGATTAGGGTCGCGTTT
AGTATCCACAAGCGCGCCGCGTACTTGCGCGTGCGTTTGGAACGGTGAAC
TCCATATATATGGTGCTCAAGCCGCGTCCTCTAAACAACGCACGCAAAAC
GTACGTAATGAAGGGGACATGCACGAATAATGCAGGAAGGAGTACTCACA
AACAGGTTGTAATTACCAGGTATGATAACGTACTACCTCGGTAATATTAT
GAGTAACATTGTTATGAGTACTCGGATTCTATGGTCGATACGCAGTACTT
CGAGTAACATTGCTTGGTACATTTTCGAGTGCGCCACATCTGAAGCATGC
TGCACGGGAGCCTACTCCCCTCCTGCATACAATCCTGTGACCCATCCAGG
ATCCCACCAAGGACTCTGAAGAAGAGGACCTTCATGGTAACAATGAAGAT
GCTGACTGGGCCACGTCGTCGGATGGAGAAGAACGCCCCGAGTGGGACGA
CAGTCTAAGGTGTTCATCCGGATCTCGGAGCGGGTCCTCCTCGCGGACAT
CGACTGAACCTCCCGAGGGTAGGGGACGCTGCGGATCGAGCGGCGGGGGA
AGGAGTAGCGCCGTAGGGAAGGACAAGAAGTTGATCCCCAAGCGTCGCAT
GAGCATGACCATGATACTACCCGAGGGGCCGGTGAGGAGGCCCAGGAACC
AGCCCCCTCCCACTGTGCACACATACCTCAACAAGATGAATGCAGAGGTG
AGCTTCTCCAGCTGATTTAGTCGTTGGCTAATGAGACATCGTTCTGTCGT
GTTTGTTCTTTCTTCTATGGCTATGATGCACTGCCATGCAATCGATACAG
CCAATCCGCCGGAATCAGAGCTATGATCGGCTAACCTCCCTTCCTTCAAC
ACTTCATTGCACGAACTATATTTTTGCCCCCGTCTTGCACCTTACCCCCC
CCGCCCCCCCGTCACTCTTTACTATCGCACCAATCCTCCGTCACCAAGGT
CTTCGACTTCAACGGAGACACCCGTAAGCAGCTGGCTCGTGCGATGAGAG
CATTTAGCAGCAGCTTCGCGAGAACCAACCGCCGTAAGCTACTGAGGAAG
CACTTTCTGGCGTTCGACGTGAATAATACAGGGAGAATCAACAGGGAGCA
GTTTGCCGACACCGTTCACGAGGCGAGAAAGAGCAGGATTACCACAGCCG
AAATCACCGGCCGACACCATAGCTTCTCTCGGACAAGTGACGTCGCGAAA
AAAAAGGACATATTATGCCTTGGTTGGGGCACTTGTGCCGCAACGCAGTG
TCTCTTTGCTACGGTGGAACATTTCCATCTGATTACATGTTTCAGTTGCG
CATAAATCCTCTTGTTGTGTGCGACTTCATCCTACGACAGAATGCTTAGT
GCCGTCGCCAAACAAACATATCGTGTGGTTCCCAGCCAAACCTCATAACG
CCTCGTATCATCCATCCCTCCTTTTAAAAACGCGGAAAGGATGTGTATTT
CAATCACACGACCTTACCAAAAATGATAGGTTGCTTCCGAGTTTTTCATC
GACTTCGACGACAGAAACAAGGAGCTCCTGGCTTCCTTCTTCTTTCCCAA
GGCAAGTATGGTTGCCACGCGAGAAGACAAGCGGAGCCCCCCTTCTTTCA
GGACGATAAATGTCAACAGCCACATTTGCGGCACTAATGAGTGGAGTGGA
AAACTTAGGAAATATATCCGTCCGGTGACACCTCGGTACATTTTACGAGC
GCCTATACGCACAATCCAGTCGAACGAAGAGGGGAGCTCTATCGGGGCTC
AAACGGCGATGGACTCGCAAGAAGGAAGAGCGGACTTTTCTTGACAGCAA
TAATCTGTACACGTATGGCATGGACGGTTTATGACAAATACGCCTCCTCA
GGAGCATGGGAGGATTGAGTACGAGACTCTGCTGGAGATCATCACCGCGA
GAGACGTCCGCCGGGCGTACGCATTTCGTCAGCAGACGGCTAACGAGGGG
GCAGACTGGGACGAGCTCTTCACAGGCATCGACAACACCACCAGGAAGAG
AGACTTTGGGGGTACTCTGGTGAGAAGAGAAATTTGAGCGATTCAAATAA
AAGAGAACGCCCGATGGGGGGTGTAGGCTTCTCCTATTCGTGTTTCCCCA
CTACGATGCCACTAACAATCCCAAGCAACAACAATATTTTATAAGGAATA
ATTACCGAGGTGTAATTTTCAATTGACTTTTACCCTGTGGTGTAATGGTT
ACCTTATCACATTGGCGTCGACGTGGACTCGGGTTCAAATATCGCTGAGC
TAACTTCTTTCACTCACGGAACTCCTGGGCAGAATATCGGGTGGAGACTA
AAAATTAAAAAGTAATACCTCGCCGAATTCCTGAGAAGAATATCGGTTGG
AGATAAGATTATATTACTTCGTTTAAAGAAAGCGATAATGCTCCTTACCT
ACACTGCCCCCCCCTATACTCAAAACCTTATCGAATTAACTATCAATGGT
GACCTCGATCACCAGATAGTCAAATTCTGTGGGTGGAGAGTGCCATAAGG
ACTAATTGCCGAGTTGTAATTGTCTATTGAATTTTACGATGTGATGTAAT
GGTTACCTTATCACAAATATTATTCGAGATGTTAGAGATCCAATCGCCAA
GAAATGCTAAACGGGGTAATTTTCCGGCTCAGTACCCGTCAAGTTAAGGA
AGGAAATAGAAAAAGGTAACTCATGTATCTGGAAGGGAACCCCCCTCCAC
CCCCCCCCGACCCGCACGGTATATCTAAAAGCGTTTGGTTGGTGCCAACT
GAAGGCAAACTGCGTAAGAATGCTCAGAAGTATGAGTCACCGGCGCCAAA
TTTCACGCCTGGGCCAGGGTGGCAAAAGATATGTAATATACTATGTCCAT
AGTACACGTACAATTTACCTCGTCATCCTTGTAGTCGCGCGATCCGTCAT
AAACGCGTCTCTTTAGGTTGTGTGGTTTCAGTTACATCCCGAGTCGGACG
ATTTTGGAACCTCGAAGCTGCTACTTCCTCGTATGGCTTGTGGACAAGGC
TTTCGTGTAACTGGAAAGCCCTAGTAAAACCATCCCTACTAGTACATATT
TTCGATGCGCGCGCTTTCTTTGTCACAGAACCTGTTCGCAACGGCTTACT
GA
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Coding sequence (CDS) from alignment at H-elongata_contig1498:7616..13217-

>mRNA_H-elongata_contig1498.3332.1 ID=mRNA_H-elongata_contig1498.3332.1|Name=mRNA_H-elongata_contig1498.3332.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1596bp|location=Sequence derived from alignment at H-elongata_contig1498:7616..13217- (Himanthalia elongata Himel1 dioecious)
ATGATGCTTAAGTCCAAGTTCATCCGTACATTGAGACAAATTGAAAAGGA
AGCCATTCAGGCACCCTCTGCCAAGGCGGGTGCCAACCCACTTTCCGACA
AGATGATGCTTAAGTCCAAGTTCATCCGTACATTGAGACAAATTGAAAAG
GAAGCCATTCAGGCACCCTCTGCCAAGGCGGGTGCCAACCCACTTTCCGA
CAAGGAGCTGTCCGAGATCGTGGATGAATTTGCAGACAAGGGTAATCCAG
ACTCCAAAGGAGAAAAAAAGATCCTGTATGACGACTTCGTTGACATGCTG
GTCGTCGGTTCTCCCAGGAGCTGTCCGAGATCGTGGATGAATTTGCAGAC
AAGGGTAATCCAGACTCCAAAGGAGAAAAAAAGATCCTGTATGACGACTT
CGTTGACATGCTGGTCGTCGGTTCTCCCAGGAGTAGCGCCGTAGGGAAGG
ACAAGAAGTTGATCCCCAAGCGTCGCATGAGCATGACCATGATACTACCC
GAGGGGCCGGTGAGGAGGCCCAGGAACCAGCCCCCTCCCACTGTGCACAC
ATACCTCAACAAGATGAATGCAGAGGAGTAGCGCCGTAGGGAAGGACAAG
AAGTTGATCCCCAAGCGTCGCATGAGCATGACCATGATACTACCCGAGGG
GCCGGTGAGGAGGCCCAGGAACCAGCCCCCTCCCACTGTGCACACATACC
TCAACAAGATGAATGCAGAGGTCTTCGACTTCAACGGAGACACCCGTAAG
CAGCTGGCTCGTGCGATGAGAGCATTTAGCAGCAGCTTCGCGAGAACCAA
CCGCCGTAAGCTACTGAGGAAGCACTTTCTGGCGTTCGACGTGAATAATA
CAGGGAGAATCAACAGGGAGCAGTTTGCCGACACCGTCTTCGACTTCAAC
GGAGACACCCGTAAGCAGCTGGCTCGTGCGATGAGAGCATTTAGCAGCAG
CTTCGCGAGAACCAACCGCCGTAAGCTACTGAGGAAGCACTTTCTGGCGT
TCGACGTGAATAATACAGGGAGAATCAACAGGGAGCAGTTTGCCGACACC
GTTGCTTCCGAGTTTTTCATCGACTTCGACGACAGAAACAAGGAGCTCCT
GGCTTCCTTCTTCTTTCCCAAGGCAAGTATGGTTGCTTCCGAGTTTTTCA
TCGACTTCGACGACAGAAACAAGGAGCTCCTGGCTTCCTTCTTCTTTCCC
AAGGCAAGTATGGAGCATGGGAGGATTGAGTACGAGACTCTGCTGGAGAT
CATCACCGCGAGAGACGTCCGCCGGGCGTACGCATTTCGTCAGCAGACGG
CTAACGAGGGGGCAGACTGGGACGAGCTCTTCACAGGCATCGACAACACC
ACCAGGAAGAGAGACTTTGGGGGTACTCTGGAGCATGGGAGGATTGAGTA
CGAGACTCTGCTGGAGATCATCACCGCGAGAGACGTCCGCCGGGCGTACG
CATTTCGTCAGCAGACGGCTAACGAGGGGGCAGACTGGGACGAGCTCTTC
ACAGGCATCGACAACACCACCAGGAAGAGAGACTTTGGGGGTACTCTGAA
CCTGTTCGCAACGGCTTACTGAAACCTGTTCGCAACGGCTTACTGA
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