prot_H-elongata_contig149747.3328.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149747.3328.1
Unique Nameprot_H-elongata_contig149747.3328.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: D7G7W1_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W1_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.330e-19
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MALVHSR+RRV+YG R+ + GCLGS+ MLHTL++LNH YRVFEGVC +ECR
Sbjct:  299 MALVHSRVRRVIYGVRDTERGCLGSVTMLHTLTSLNHNYRVFEGVCADECR 349          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: E2B9Q0_HARSA (tRNA-specific adenosine deaminase-like protein 3 n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2B9Q0_HARSA)

HSP 1 Score: 68.9 bits (167), Expect = 2.290e-12
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MAL+HSR+ RV YGA NP+ G LGS  +LHT+  LNH+YRV+ G+   ECR
Sbjct:  365 MALLHSRVARVFYGAANPRVGVLGSRAILHTMPGLNHRYRVWSGILERECR 415          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: UPI0013F2132B (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F2132B)

HSP 1 Score: 68.2 bits (165), Expect = 4.280e-12
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MAL+HSR+ R+ YGA NP+ G LGS  +LHT   LNH+YRV+ G+  +ECR
Sbjct:  363 MALLHSRVARIFYGATNPRVGVLGSRAVLHTTPGLNHRYRVWSGILEQECR 413          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: A0A6P3Y1D6_DINQU (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3Y1D6_DINQU)

HSP 1 Score: 68.2 bits (165), Expect = 4.330e-12
Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MAL+HSR+ R+ YGA NP+ G LGS+ +LHT+  LNH+YRV+ G+   EC+
Sbjct:  363 MALLHSRVSRIFYGAANPRIGVLGSVAVLHTMPGLNHRYRVWSGILERECQ 413          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: UPI0009959BDE (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI0009959BDE)

HSP 1 Score: 65.1 bits (157), Expect = 5.260e-11
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MAL+HSR+ R+ YGA NP  G LG+  +LHTL  LNH+Y+V+ G+   EC+
Sbjct:  360 MALLHSRVARIFYGAANPSAGVLGTRALLHTLPGLNHRYQVWSGILERECQ 410          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: UPI00083C5AF7 (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Rhinopithecus bieti TaxID=61621 RepID=UPI00083C5AF7)

HSP 1 Score: 60.8 bits (146), Expect = 1.600e-10
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEECR 51
            MALVHSRI RV YGA +P DG LG+   +H    LNH+++VF GV  EECR
Sbjct:   71 MALVHSRILRVFYGAPSP-DGALGTRFRIHARPDLNHRFQVFRGVLEEECR 120          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: A0A1V9YNE8_9STRA (Inactive tRNA-specific adenosine deaminase-like protein 3-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNE8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.500e-10
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEG 44
            MALVHSR+RRV+Y  +NP+ G LGS   LHT  +LNH+YRVF  
Sbjct:  235 MALVHSRVRRVIYVTKNPRSGALGSCHFLHTQRSLNHRYRVFHA 278          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: A0A6P4Y6D1_BRABE (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y6D1_BRABE)

HSP 1 Score: 62.4 bits (150), Expect = 4.640e-10
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEEC 50
            MALVHSRIRRV YGA +P +G LG+   LHT   +NH+Y VF+ V LEEC
Sbjct:  333 MALVHSRIRRVFYGAPHP-NGALGTKYSLHTQPNINHRYEVFKHVMLEEC 381          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: A0A6P8HEC4_ACTTE (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEC4_ACTTE)

HSP 1 Score: 62.4 bits (150), Expect = 4.690e-10
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEEC 50
            MALVHSRIRRV YG ++P  G LGS   LHT   LNH + VF G+  +EC
Sbjct:  351 MALVHSRIRRVFYGCKDPSVGALGSKYRLHTQDGLNHHFEVFCGILEKEC 400          
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Match: A0A6A0GTD3_HYAAZ (CMP/dCMP-type deaminase domain-containing protein (Fragment) n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0GTD3_HYAAZ)

HSP 1 Score: 60.8 bits (146), Expect = 5.980e-10
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEEC 50
            MAL+HSR++RV Y  RN + G LGS++ LHTL  +NH+Y VF    +E+C
Sbjct:  152 MALLHSRVQRVFYHHRNAEKGALGSVVKLHTLPNINHRYEVFNVTAVEDC 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149747.3328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7W1_ECTSI5.330e-1972.55CMP/dCMP-type deaminase domain-containing protein ... [more]
E2B9Q0_HARSA2.290e-1258.82tRNA-specific adenosine deaminase-like protein 3 n... [more]
UPI0013F2132B4.280e-1256.86probable inactive tRNA-specific adenosine deaminas... [more]
A0A6P3Y1D6_DINQU4.330e-1254.90probable inactive tRNA-specific adenosine deaminas... [more]
UPI0009959BDE5.260e-1152.94probable inactive tRNA-specific adenosine deaminas... [more]
UPI00083C5AF71.600e-1058.82probable inactive tRNA-specific adenosine deaminas... [more]
A0A1V9YNE8_9STRA2.500e-1061.36Inactive tRNA-specific adenosine deaminase-like pr... [more]
A0A6P4Y6D1_BRABE4.640e-1062.00probable inactive tRNA-specific adenosine deaminas... [more]
A0A6P8HEC4_ACTTE4.690e-1058.00probable inactive tRNA-specific adenosine deaminas... [more]
A0A6A0GTD3_HYAAZ5.980e-1052.00CMP/dCMP-type deaminase domain-containing protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 1..51
e-value: 6.2E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR11079:SF156INACTIVE TRNA-SPECIFIC ADENOSINE DEAMINASE-LIKE PROTEIN 3-RELATEDcoord: 1..48
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 1..48
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149747contigH-elongata_contig149747:1160..1312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149747.3328.1mRNA_H-elongata_contig149747.3328.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149747 1154..1312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149747.3328.1 ID=prot_H-elongata_contig149747.3328.1|Name=mRNA_H-elongata_contig149747.3328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MALVHSRIRRVVYGARNPKDGCLGSLMMLHTLSALNHKYRVFEGVCLEEC
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016193Cytidine_deaminase-like