prot_H-elongata_contig149605.3315.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149605.3315.1
Unique Nameprot_H-elongata_contig149605.3315.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.560e-18
Identity = 33/43 (76.74%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF 43
            ++KRGR+++CT+CK +GATIGCLVE+CK+SYHFPCAEATGWSF
Sbjct: 1117 EIKRGRKMNCTSCKRRGATIGCLVESCKNSYHFPCAEATGWSF 1159          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: F0Y8N5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8N5_AURAN)

HSP 1 Score: 60.5 bits (145), Expect = 1.590e-9
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 VKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF 43
             KRG QL C AC G+GATIGC V +C+ SYH PCA ++ W F
Sbjct:  748 AKRGAQLRCFACDGRGATIGCHVASCQRSYHAPCAVSSRWRF 789          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: A0A6F9CEF9_9TELE (PHD-type domain-containing protein n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9CEF9_9TELE)

HSP 1 Score: 59.3 bits (142), Expect = 3.890e-9
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATG 40
            +++RG +LSC  CK KGAT+GC VE+C+ SYH+PCA   G
Sbjct:   68 EMRRGNRLSCYRCKRKGATVGCEVESCQKSYHYPCAVQDG 107          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: UPI001BE063F4 (uncharacterized protein LOC121571586 isoform X1 n=3 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001BE063F4)

HSP 1 Score: 59.3 bits (142), Expect = 4.070e-9
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATG 40
            +++RG +LSC  CK KGAT+GC VE+C+ SYH+PCA   G
Sbjct:   68 EMRRGNRLSCYRCKRKGATVGCEVESCQKSYHYPCAVQDG 107          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: UPI00145BDF63 (uncharacterized protein phf11 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145BDF63)

HSP 1 Score: 57.8 bits (138), Expect = 1.370e-8
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCA 36
            + +RGR+LSC+ CK KGAT+GC  + CK SYH+PCA
Sbjct:   63 EQQRGRRLSCSKCKKKGATVGCETKACKKSYHYPCA 98          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: UPI0018E1E312 (cyclin-dependent kinase 12 isoform X1 n=5 Tax=Cyprinodon TaxID=28741 RepID=UPI0018E1E312)

HSP 1 Score: 57.0 bits (136), Expect = 2.660e-8
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATG 40
            +VKRGR+L+C+ CK KGAT GC V  CK ++H+PCA   G
Sbjct:   65 EVKRGRKLTCSGCKKKGATAGCEVGRCKRTFHYPCAVEGG 104          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: A0A3Q2ZIF1_KRYMA (PHD finger protein 11 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZIF1_KRYMA)

HSP 1 Score: 57.0 bits (136), Expect = 2.660e-8
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCA 36
            +VKRGR+LSC+ C+ +GAT GC V  CK S+H+PCA
Sbjct:   65 EVKRGRKLSCSGCRKRGATSGCEVRRCKKSFHYPCA 100          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: UPI0005AC889A (histone-lysine N-methyltransferase trithorax n=1 Tax=Fopius arisanus TaxID=64838 RepID=UPI0005AC889A)

HSP 1 Score: 56.2 bits (134), Expect = 4.960e-8
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    2 VKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF 43
            + RGRQ+ C+ C  KGA+IGC  + C ++YHFPCA   G  F
Sbjct: 1369 ISRGRQIRCSECGKKGASIGCCAKNCSTTYHFPCARNAGLGF 1410          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: A0A0C9QYN4_9HYME (Trx_1 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9QYN4_9HYME)

HSP 1 Score: 56.2 bits (134), Expect = 4.960e-8
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    2 VKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF 43
            + RGRQ+ C+ C  KGA+IGC  + C ++YHFPCA   G  F
Sbjct: 1369 ISRGRQIRCSECGKKGASIGCCAKNCSTTYHFPCARNAGLGF 1410          
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Match: A0A2K3DMH1_CHLRE (PHD-type domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DMH1_CHLRE)

HSP 1 Score: 56.2 bits (134), Expect = 4.960e-8
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 VKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF 43
            ++RGRQL C  C  +GAT+GC VE C +SYH  CA+A+G  F
Sbjct:   84 IRRGRQLRCGLCGERGATLGCRVERCNTSYHLHCAKASGCFF 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149605.3315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE4.560e-1876.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y8N5_AURAN1.590e-959.52Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6F9CEF9_9TELE3.890e-957.50PHD-type domain-containing protein n=1 Tax=Coregon... [more]
UPI001BE063F44.070e-957.50uncharacterized protein LOC121571586 isoform X1 n=... [more]
UPI00145BDF631.370e-861.11uncharacterized protein phf11 n=1 Tax=Periophthalm... [more]
UPI0018E1E3122.660e-857.50cyclin-dependent kinase 12 isoform X1 n=5 Tax=Cypr... [more]
A0A3Q2ZIF1_KRYMA2.660e-861.11PHD finger protein 11 n=1 Tax=Kryptolebias marmora... [more]
UPI0005AC889A4.960e-850.00histone-lysine N-methyltransferase trithorax n=1 T... [more]
A0A0C9QYN4_9HYME4.960e-850.00Trx_1 protein (Fragment) n=1 Tax=Fopius arisanus T... [more]
A0A2K3DMH1_CHLRE4.960e-854.76PHD-type domain-containing protein n=2 Tax=Chlamyd... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 3..41
e-value: 1.8E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR14955:SF4coord: 2..43
NoneNo IPR availablePANTHERPTHR14955RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20coord: 2..43
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..43
e-value: 1.5E-13
score: 52.9
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 1..43
score: 16.048

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149605contigH-elongata_contig149605:448..576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149605.3315.1mRNA_H-elongata_contig149605.3315.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149605 448..576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149605.3315.1 ID=prot_H-elongata_contig149605.3315.1|Name=mRNA_H-elongata_contig149605.3315.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
QVKRGRQLSCTACKGKGATIGCLVETCKSSYHFPCAEATGWSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR034732EPHD