prot_H-elongata_contig149482.3310.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149482.3310.1
Unique Nameprot_H-elongata_contig149482.3310.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: A0A5J5C4J0_9ASTE (Integrase catalytic domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5C4J0_9ASTE)

HSP 1 Score: 53.9 bits (128), Expect = 7.960e-7
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    7 MWNRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVY--LRRSKPGHKLAPRGASCIMLG 65
            M NR    ++D G SPYE+ YG+ PT++N  PFG +V+  LR   P H LAPR  SC  LG
Sbjct:   48 MINRLPTLTLD-GLSPYEILYGKPPTYSNFHPFGCLVFPNLRNYAP-HNLAPRSRSCAFLG 106          
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: A0A251UMR8_HELAN (Putative ribonuclease H-like domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UMR8_HELAN)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-5
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   14 SSIDSGTSPYELWYGRRPTFANIPPFGTVVY-LRRSKPGHKLAPRGASCIMLG 65
            SS+ +  SPYE+ YGR PT++N+  FG  V+   R    HKLAPR A CI +G
Sbjct:   54 SSVLNFKSPYEVLYGRCPTYSNLRIFGCRVFPYLRDYAKHKLAPRSAECIFIG 106          
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: UPI00115E8C8E (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI00115E8C8E)

HSP 1 Score: 48.1 bits (113), Expect = 6.090e-5
Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    9 NRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVYLRRSKPGHKLAPRGASCIMLG 65
            NR    S++  T+PYELWYG+RP  + +  +G   Y+++ +P  KL P+   C+ +G
Sbjct:   24 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCVFIG 77          
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: UPI0012D47DD2 (hypothetical protein n=1 Tax=Levilactobacillus brevis TaxID=1580 RepID=UPI0012D47DD2)

HSP 1 Score: 48.5 bits (114), Expect = 6.100e-5
Identity = 22/57 (38.60%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    9 NRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVYLRRSKPGHKLAPRGASCIMLG 65
            NR    S++  T+PYELWYG+RP  + +  +G   Y+++ +P  KL P+   CI +G
Sbjct:   32 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCIFIG 85          
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: A0A8I6XT42_HORVV (Uncharacterized protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A8I6XT42_HORVV)

HSP 1 Score: 48.5 bits (114), Expect = 6.900e-5
Identity = 22/57 (38.60%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    9 NRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVYLRRSKPGHKLAPRGASCIMLG 65
            NR    S++  T+PYELWYG+RP  + +  +G   Y+++ +P  KL P+   CI +G
Sbjct:  536 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAKKCIFIG 589          
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Match: UPI00136F9A8D (hypothetical protein n=1 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI00136F9A8D)

HSP 1 Score: 48.1 bits (113), Expect = 9.200e-5
Identity = 21/57 (36.84%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    9 NRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVYLRRSKPGHKLAPRGASCIMLG 65
            NR    S++  T+PYELWYG+RP  + +  +G   Y+++ +P  KL P+   C+ +G
Sbjct:   24 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCVFIG 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149482.3310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A5J5C4J0_9ASTE7.960e-749.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A251UMR8_HELAN1.400e-549.06Putative ribonuclease H-like domain-containing pro... [more]
UPI00115E8C8E6.090e-536.84hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
UPI0012D47DD26.100e-538.60hypothetical protein n=1 Tax=Levilactobacillus bre... [more]
A0A8I6XT42_HORVV6.900e-538.60Uncharacterized protein n=6 Tax=cellular organisms... [more]
UPI00136F9A8D9.200e-536.84hypothetical protein n=1 Tax=Ligilactobacillus sal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149482contigH-elongata_contig149482:1372..1566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149482.3310.1mRNA_H-elongata_contig149482.3310.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149482 1357..1566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149482.3310.1 ID=prot_H-elongata_contig149482.3310.1|Name=mRNA_H-elongata_contig149482.3310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MAYACDMWNRCTFSSIDSGTSPYELWYGRRPTFANIPPFGTVVYLRRSKP
GHKLAPRGASCIMLG
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