mRNA_H-elongata_contig14917.3294.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A6H5KV29_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV29_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.280e-39 Identity = 122/292 (41.78%), Postives = 150/292 (51.37%), Query Frame = 3
Query: 54 KRRDSRRASWMAERERDDTAEALGQGMYSLHALIGQGSFGRIHLASWR-------------------PNDDEGLNGRQDADLRRGDNHLEQTTPAAEDSFEESSLSTVAARIKEAFRSRRLRDTLEASAKK---FQRRQGGRFR--------DGPKPARTSGSEFSNRKQCDQVCIVREQDGWAQEAEKGAEEKAGVRRRALKSVCKRKVTEKGLLRHIQAEIAVLRRCSHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQARCLRGNLQSRTSHFVS 839
+R DS + AE+ R D AEA G G+YSLHA++GQG+FGRIHLASWR P+ G TTP A +S AA E S L +A +R G R R G R + + S + + + +DG G A +R RALKSVCKRKVTEKGL+RH++ E+AVL++CSHPFI+SLSPGGQFQTSGHLHLVL+YCPGGDLFSLL R GRLPE+Q + L H S
Sbjct: 109 RRSDSWKIDGAAEQGRYDAAEARGYGLYSLHAVLGQGTFGRIHLASWRHRGGGLAATASSPASLDDRPSPRGGXXXXXXXXXXXXXXXXXXTTPRAR-----YRISRAAATAGEGPASEALPVGFSGAAAAGAGTRRADGHRTRRSIRYLAGSGRSAGRNNNNCSSGGRSDTRHRSLLSEDGEVWTGPGGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSGHLHLVLNYCPGGDLFSLLARVGRLPEAQVKVCAAQLALALRHLHS 395
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A7S2QBH5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QBH5_9DINO) HSP 1 Score: 68.6 bits (166), Expect = 3.600e-9 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRCSHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQAR 794
A+K + K ++ ++ + H AE +L+R SHPFI+SL FQTS LHLVLDYC GG+LF LGRE E +AR
Sbjct: 42 AMKVLDKEEMVQRQQVEHTMAEKRILQRISHPFIVSLHFA--FQTSRKLHLVLDYCAGGELFFHLGRESTFTECRAR 116
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A662WHN8_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHN8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.980e-9 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ KR + + ++H +AE AVL RC HPFI+ L FQT HLHLVLDYCPGG+LF L + G E +A
Sbjct: 158 AIKTLSKRSIAAQNQVQHSRAEKAVLTRCRDHPFIVQLHTC--FQTIDHLHLVLDYCPGGELFFHLAQRGHFTEPEA 232
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A662YGJ4_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGJ4_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.890e-9 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ KR + + ++H +AE AVL RC HPFI+ L FQT HLHLVLDYCPGG+LF L + G E +A
Sbjct: 335 AIKTLSKRSIAAQNQVQHSRAEKAVLTRCRDHPFIVQLHTC--FQTIDHLHLVLDYCPGGELFFHLAQRGHFTEPEA 409
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A7S3JCG8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JCG8_9SPIT) HSP 1 Score: 64.3 bits (155), Expect = 1.830e-8 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRCSHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQAR 794
A+K + KRK+ + L+R+ + E VL SHPFI+S+ FQT L+++L+YCPGGDL S+L RE +L E +A+
Sbjct: 60 AMKILQKRKIMGQNLVRYARTERDVLSYFSHPFIVSIKYA--FQTPEKLYMILEYCPGGDLGSVLKREKKLSEERAK 134
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A1V9ZQ32_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ32_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.050e-8 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ K +T + + H +AE VL +C +HPF++ L FQT HLH+VL+YCPGG+LF L R+GR E+QA
Sbjct: 332 AIKTLNKHALTTQNQVAHTKAERNVLIKCYNHPFVVKLHAA--FQTIDHLHMVLEYCPGGELFFHLSRDGRFTEAQA 406
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A225WTH5_9STRA (AGC protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTH5_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 7.350e-8 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ KR + + ++H AE VL RC HPFI+ + FQT HLH+VLDYCPGG+LF L + G E A
Sbjct: 13 AIKTLSKRAIATQNQIQHSHAEKTVLTRCRDHPFIVKIH--ACFQTIDHLHIVLDYCPGGELFFHLSQRGHFSEHVA 87
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A067CV07_SAPPC (AGC/SGK protein kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CV07_SAPPC) HSP 1 Score: 67.0 bits (162), Expect = 7.350e-8 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ K +T + + H +AE VL +C +HPFI+ L FQT HLH+VLDYCPGG+LF L + GR E +A
Sbjct: 362 AIKTLSKHALTAQNQVAHTKAERNVLIKCYNHPFIVKLHAA--FQTIDHLHMVLDYCPGGELFFHLSKVGRFTEPEA 436
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: A0A2D4BWI4_PYTIN (AGC protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWI4_PYTIN) HSP 1 Score: 67.4 bits (163), Expect = 7.500e-8 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRCSH-PFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ K+ + + ++H +AE VL C H PFI+ + FQT HLHLVLDYCPGG+LF L R GR E QA
Sbjct: 585 AIKTLSKKALASQNQVQHSKAERHVLTLCRHHPFIIQIHAA--FQTIEHLHLVLDYCPGGELFFHLSRVGRFKEHQA 659
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Match: G4ZMP1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZMP1_PHYSP) HSP 1 Score: 66.2 bits (160), Expect = 9.060e-8 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 3
Query: 564 ALKSVCKRKVTEKGLLRHIQAEIAVLRRC-SHPFILSLSPGGQFQTSGHLHLVLDYCPGGDLFSLLGREGRLPESQA 791
A+K++ KR + + ++H +AE VL RC HPFI+ + FQT HLH+VLDYCPGG+LF L + G E A
Sbjct: 99 AIKTLSKRAIATQNQIQHSRAEKTVLTRCRDHPFIVKMH--ACFQTIDHLHIVLDYCPGGELFFHLSQRGHFTEPVA 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14917.3294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14917.3294.1 >prot_H-elongata_contig14917.3294.1 ID=prot_H-elongata_contig14917.3294.1|Name=mRNA_H-elongata_contig14917.3294.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp MAERERDDTAEALGQGMYSLHALIGQGSFGRIHLASWRPNDDEGLNGRQDback to top mRNA from alignment at H-elongata_contig14917:3153..5636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14917.3294.1 ID=mRNA_H-elongata_contig14917.3294.1|Name=mRNA_H-elongata_contig14917.3294.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2484bp|location=Sequence derived from alignment at H-elongata_contig14917:3153..5636- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14917:3153..5636- >mRNA_H-elongata_contig14917.3294.1 ID=mRNA_H-elongata_contig14917.3294.1|Name=mRNA_H-elongata_contig14917.3294.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1902bp|location=Sequence derived from alignment at H-elongata_contig14917:3153..5636- (Himanthalia elongata Himel1 dioecious)back to top |