prot_H-elongata_contig148978.3286.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148978.3286.1
Unique Nameprot_H-elongata_contig148978.3286.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig148978.3286.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.090e-17
Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    2 CNITDNNFQIATLRDPRAVTVSTYFHIARTNLPRLASEEIESVNDFCIKYIDVITQWISLRYFLFSEIIPDRSEIFWYEDAVADPIEWHGRYYAFIGLRPP 102
            C ITDN  Q   +RDPRAV VSTYFH  R +      +   S++   ++ + V+  + +LR+ LF  ++ +R+E+FWYE  V DP +WH R+ +F GL  P
Sbjct:   61 CEITDNRLQFVPIRDPRAVAVSTYFH--RVHKDNNYQKLHPSLDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILP 159          
BLAST of mRNA_H-elongata_contig148978.3286.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.400e-16
Identity = 41/104 (39.42%), Postives = 66/104 (63.46%), Query Frame = 0
Query:    6 DNNFQIATLRDPRAVTVSTYFHIARTNLPRLASEEI---ESVNDFCIKYIDVITQWISLRYFLFSEIIPDRSEIFWYEDAVADPIEWHGRYYAFIGLR-PPLWV 105
            D++ Q A LRDPRAV VSTYF++   + P   S+ +   +S+++  +  +  + Q+ ++R+ LF   + D+SEIFWYEDA+ DP+ WH R+ +F G   P  W+
Sbjct:   27 DDSLQFAVLRDPRAVAVSTYFYVK--SHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWI 128          
BLAST of mRNA_H-elongata_contig148978.3286.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.160e-15
Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    2 CNITDNNFQIATLRDPRAVTVSTYFHIARTNLPRLASEEIESVNDFCIKYIDVITQWISLRYFLFSEIIPDRSEIFWYEDAVADPIEWHGRYYAFIGLRPPLWVI 106
            C I D+  Q+  LRDPRAV VS++FH+   + P       ESV+ F ++ +  I  +I LRY +  E +  ++  F Y++++ADP++WH R+ + +GL PP  V+
Sbjct:  254 CRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVV 358          
BLAST of mRNA_H-elongata_contig148978.3286.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 7.750e-15
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 0
Query:   14 LRDPRAVTVSTYFHIARTNLPRLASEEIESVNDFCIKYIDVITQWISLRYFLFSEIIPDRSEIFWYEDAVADPIEWHGRYYAFIGLR-PPLWV 105
            +RDPRAV VSTYF+I R+ +        +S+++  +  +  I Q+ ++R+ LF   + DRSEIFWYEDA+ DP+ W+ R+ +  G   P  W+
Sbjct:    1 MRDPRAVAVSTYFYIKRSPIHLHHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWI 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148978.3286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KDV7_9PHAE2.090e-1740.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG38_9PHAE2.400e-1639.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJE4_ECTSI1.160e-1537.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2T4_ECTSI7.750e-1539.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 5..109
e-value: 8.6E-7
score: 30.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148978contigH-elongata_contig148978:1173..1517 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148978.3286.1mRNA_H-elongata_contig148978.3286.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148978 1173..1517 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148978.3286.1 ID=prot_H-elongata_contig148978.3286.1|Name=mRNA_H-elongata_contig148978.3286.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MCNITDNNFQIATLRDPRAVTVSTYFHIARTNLPRLASEEIESVNDFCIK
YIDVITQWISLRYFLFSEIIPDRSEIFWYEDAVADPIEWHGRYYAFIGLR
PPLWVIHYSAAAAIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase