prot_H-elongata_contig14897.3281.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14897.3281.1
Unique Nameprot_H-elongata_contig14897.3281.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A2R4QPS9_9PHAE (Hypothetical chloroplast protein ycf47 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 7.420e-29
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    5 KFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            KF+SI++I INIILI IILIRSPNEQSLQENL PFKFFESSSKAE F DN IQIL VLYFSLA+ Y IKNYF
Sbjct:    5 KFLSIISIGINIILIFIILIRSPNEQSLQENLDPFKFFESSSKAEIFIDNLIQILVVLYFSLALLYNIKNYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A141BSB1_9PHAE (Probable protein-export membrane protein SecG n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSB1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 4.430e-25
Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNY 75
            MKF SI++I +N  L+LIILIRSPNEQSLQENL PFK FESSSKAE   DN I+ILT++YFS+A+ Y IKNY
Sbjct:    1 MKFFSIISIIVNFFLVLIILIRSPNEQSLQENLDPFKIFESSSKAENSIDNLIKILTIIYFSIALAYNIKNY 72          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A5A4MI59_9PHAE (Uncharacterized protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MI59_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.320e-22
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            M    +++I +NI+LIL+IL+RSPNEQSLQENL+PFK FESSS+AEK  D  IQ+LTVLYF LA+ Y I++YF
Sbjct:    4 MTIFGVLSILLNILLILVILVRSPNEQSLQENLAPFKLFESSSRAEKSIDKFIQLLTVLYFLLALIYVIQSYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A0R6LUQ0_UNDPI (Probable protein-export membrane protein SecG n=23 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUQ0_UNDPI)

HSP 1 Score: 90.9 bits (224), Expect = 1.880e-22
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    8 SIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            SI++I +N  L+LIIL+RSPNEQSLQENL PFK FESSS+AEK  D  IQILT+LYF LA+ YTI+ YF
Sbjct:    8 SILSIILNFSLVLIILVRSPNEQSLQENLDPFKLFESSSRAEKSIDKLIQILTILYFVLALVYTIQRYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: D1J765_ECTSI (Uncharacterized protein ycf47 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J765_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.880e-22
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    8 SIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            SI++I +NI+LI IILIRSPNEQSLQENL+PFKFFESSS+AEK  D  IQILT+ YF +A+ Y I++YF
Sbjct:    8 SIISILLNILLISIILIRSPNEQSLQENLAPFKFFESSSRAEKSIDKLIQILTIFYFIIALIYIIQSYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A6B7EUY5_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EUY5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.020e-21
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            M F S+ +I +NI+LILIILIRSPNEQSLQENL PFK FESS +AE   D  +QILT+LYF++AI Y I +YF
Sbjct:    1 MTFFSLFSILLNILLILIILIRSPNEQSLQENLIPFKLFESSRRAETSIDKLLQILTILYFTIAICYVIGSYF 73          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A344PF79_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PF79_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.110e-21
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            M    I++I +NI+LILIILIRSPNEQSLQENL+PF+ FESSS+AEK  D  IQ+LT+ YF LA+ Y I++YF
Sbjct:    4 MTLFGILSIMLNILLILIILIRSPNEQSLQENLAPFRLFESSSRAEKSIDKVIQLLTIGYFLLALLYVIQSYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A8F0F7T2_9PHAE (Probable protein-export membrane protein SecG n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7T2_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 4.410e-21
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    8 SIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            S+++IT NI+LIL+IL+RSPNEQSLQENL P K FESSSKAEK  D  IQIL + YF LA+ Y I++YF
Sbjct:    8 SLLSITSNILLILVILVRSPNEQSLQENLDPLKLFESSSKAEKSIDKLIQILAIFYFVLALCYNIQSYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A8F0F9M4_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.470e-19
Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            M    I+   +NI+LIL+IL+RSPNEQSLQENL PF  FESSS+AEK  D  I+ LT +YF LA+FY I+ YF
Sbjct:    4 MNIFGILTTILNIVLILVILVRSPNEQSLQENLDPFNLFESSSRAEKSIDRLIKRLTFMYFFLALFYAIQGYF 76          
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Match: A0A8F0F716_9PHAE (Probable protein-export membrane protein SecG n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F716_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.060e-19
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    4 MKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEKFFDNSIQILTVLYFSLAIFYTIKNYF 76
            M  +S ++I IN++LI++I+IRSP+EQSLQENL P +FFESSS+AE   DN I+ILT LYF L +   I+NYF
Sbjct:    1 MSILSTLSIFINVVLIILIIIRSPDEQSLQENLGPLQFFESSSEAESTLDNLIKILTFLYFILGLILIIQNYF 73          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14897.3281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2R4QPS9_9PHAE7.420e-2981.94Hypothetical chloroplast protein ycf47 n=3 Tax=Fuc... [more]
A0A141BSB1_9PHAE4.430e-2570.83Probable protein-export membrane protein SecG n=14... [more]
A0A5A4MI59_9PHAE1.320e-2264.38Uncharacterized protein n=4 Tax=Scytosiphonaceae T... [more]
A0A0R6LUQ0_UNDPI1.880e-2269.57Probable protein-export membrane protein SecG n=23... [more]
D1J765_ECTSI1.880e-2269.57Uncharacterized protein ycf47 n=2 Tax=Ectocarpus s... [more]
A0A6B7EUY5_9PHAE2.020e-2165.75Uncharacterized protein n=1 Tax=Cladosiphon okamur... [more]
A0A344PF79_9PHAE3.110e-2164.38Uncharacterized protein n=1 Tax=Endarachne bingham... [more]
A0A8F0F7T2_9PHAE4.410e-2166.67Probable protein-export membrane protein SecG n=2 ... [more]
A0A8F0F9M4_9PHAE1.470e-1960.27Uncharacterized protein n=1 Tax=Chorda asiatica Ta... [more]
A0A8F0F716_9PHAE8.060e-1958.90Probable protein-export membrane protein SecG n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..76
NoneNo IPR availableTMHMMTMhelixcoord: 55..72
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14897contigH-elongata_contig14897:3897..4127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14897.3281.1mRNA_H-elongata_contig14897.3281.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14897 3885..4127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14897.3281.1 ID=prot_H-elongata_contig14897.3281.1|Name=mRNA_H-elongata_contig14897.3281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MIPMKFISIMAITINIILILIILIRSPNEQSLQENLSPFKFFESSSKAEK
FFDNSIQILTVLYFSLAIFYTIKNYF*
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