mRNA_H-elongata_contig14897.3277.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A2R4QPS4_9PHAE (Hypothetical chloroplast protein 37 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS4_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.130e-86 Identity = 133/176 (75.57%), Postives = 156/176 (88.64%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLLNIES 528
MNS+FPL+YS LFC L IS+F++KQI+NTQ E+K+F+LQ +IKKN+ S+ELYYKLGQLYLKKKLFSK+ILLFR+AIKNWDIND IGL SLYN+IGFTYFTLKEYNL+IYYYKIA+KI+PDY +ALIN+GYAYEKQNLLLESYN YNKVL YN NSL LKRIK ++RLL +S
Sbjct: 1 MNSLFPLLYSALLFCLLLLISFFIVKQILNTQGLERKMFELQIMIKKNDGSHELYYKLGQLYLKKKLFSKSILLFREAIKNWDINDNIGLASLYNSIGFTYFTLKEYNLAIYYYKIALKIIPDYIVALINIGYAYEKQNLLLESYNSYNKVLFYNAYNSLVLKRIKIVKRLLMSKS 176
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A1L2F1S0_9PHAE (Ycf37 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1S0_9PHAE) HSP 1 Score: 255 bits (652), Expect = 1.480e-84 Identity = 132/175 (75.43%), Postives = 149/175 (85.14%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLLNIE 525
M S+FPLIYSI LFCFL I F++KQ+I+TQ EKK F+LQ LIKK+ SYE+YYKLGQLYLKKKLF KAIL+FRKAI NWDIND IGLG LYN IGFTYFTLKEYNL+IYYYKI++KI+PDYTIALINL Y YEKQN LL+SYN YNKVL +NN N+LALKRIK I RLL I+
Sbjct: 1 MTSLFPLIYSITLFCFLILIISFIIKQVIDTQKLEKKTFELQLLIKKDNTSYEVYYKLGQLYLKKKLFPKAILVFRKAINNWDINDNIGLGHLYNIIGFTYFTLKEYNLAIYYYKISLKIIPDYTIALINLAYVYEKQNFLLDSYNSYNKVLYFNNNNNLALKRIKIISRLLKID 175
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A141BSA4_9PHAE (Ycf37 n=12 Tax=Sargassum TaxID=3015 RepID=A0A141BSA4_9PHAE) HSP 1 Score: 249 bits (637), Expect = 2.850e-82 Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 516
M S+FPLIYSI LFCFL I +F++KQ+I+TQ EKK F+LQTL+K+N SYE YYKLG+LYLKKKLF KAILLFRKAI NWDIND IGLG +YN IG TYFTLKEYN +IYYYKIA+ I+PDYTIALINL Y YEKQNLLL+SYN+YNKVL YN ++LALK+IK I+RLL
Sbjct: 1 MTSLFPLIYSITLFCFLILIIFFIIKQVIDTQKLEKKTFELQTLLKRNNTSYESYYKLGKLYLKKKLFLKAILLFRKAINNWDINDNIGLGHVYNVIGLTYFTLKEYNFAIYYYKIALTIIPDYTIALINLAYVYEKQNLLLDSYNYYNKVLYYNKNSNLALKKIKKIRRLL 172
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A0S0GMY7_COSCS (Uncharacterized protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0GMY7_COSCS) HSP 1 Score: 220 bits (561), Expect = 1.200e-70 Identity = 115/172 (66.86%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 516
MNS+FPL+YSI LF FL IS+++LKQI NTQ EKKIFKLQ IKK+ SYE +YKLGQLYLKKKLF KAILLFR+A+K W+ ND+IGLGSLYNTIGFTYFTLK+Y+L+ YYY IAI+I+PDYT+AL NLGY+YEK NL +ESYN Y L+++ +N LA RI +++ L
Sbjct: 1 MNSLFPLVYSIALFVFLFVISFYILKQITNTQKLEKKIFKLQESIKKDNVSYETFYKLGQLYLKKKLFYKAILLFRQALKAWNPNDKIGLGSLYNTIGFTYFTLKQYSLANYYYSIAIEIIPDYTLALTNLGYSYEKLNLSVESYNCYKNALVWDPQNKLASSRILVVEKKL 172
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0FAZ0_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ0_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.070e-68 Identity = 112/170 (65.88%), Postives = 136/170 (80.00%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQR 510
MNS FPLIYSI LF L IS++L+KQI+NTQ EKKI LQ IK ++ SYE++YKLGQLYLKKKLF KAILLFR+A+K W+ ND+I LGSLYNTIGFTYF LK+Y+L+IYYYKIAIKI+PDYT+AL NL YAYEK NL E+Y+ Y L++N +N LA RI ++R
Sbjct: 1 MNSFFPLIYSITLFFILFIISFYLIKQIVNTQKVEKKIIDLQDSIKTDKASYEIFYKLGQLYLKKKLFYKAILLFRRALKTWNTNDKIALGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYSEAYDCYKTTLVWNPKNELASSRILTVKR 170
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F7S5_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7S5_9PHAE) HSP 1 Score: 214 bits (544), Expect = 4.310e-68 Identity = 111/172 (64.53%), Postives = 136/172 (79.07%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 516
MNS+FPL+YS LF FL+ IS++++KQI NTQ EKKIF LQ +KKN+ SYE Y+LGQLYLKKKLF KAILLFRKA+K WD ND+IGLGSLYNTIGFTYFTLK+Y L+ YYY IAI I+PDYT+AL NLGY YEK +L +E+YN Y L+++ +N LA RI ++ L
Sbjct: 1 MNSLFPLVYSAALFIFLSVISFYIIKQISNTQKVEKKIFVLQEAVKKNDASYESLYELGQLYLKKKLFYKAILLFRKALKTWDTNDKIGLGSLYNTIGFTYFTLKQYKLASYYYNIAITIIPDYTLALTNLGYTYEKLDLTVEAYNCYKDTLVWDPKNELAALRILITEKRL 172
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F9I7_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9I7_9PHAE) HSP 1 Score: 209 bits (531), Expect = 3.950e-66 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQR 510
MNS+FPLIYS LF FL IS+F+LKQI NTQ EKKI KLQ +K N SYE +YKLGQLYLKKKLF KAILLFR+A+K W+ +D+IGLGSLYNTIGFT+FTLK+Y+L+ YYY IAI+ILPDYT+AL NL Y YEK NLL E+YN Y LL++ N +A RI +++
Sbjct: 1 MNSLFPLIYSTVLFIFLFIISFFILKQISNTQKIEKKIVKLQENVKANNTSYEAFYKLGQLYLKKKLFYKAILLFRQALKIWNPDDKIGLGSLYNTIGFTFFTLKQYSLAKYYYSIAIEILPDYTLALTNLAYTYEKLNLLGEAYNCYKSTLLWDPENKIASSRILVVEK 170
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A5A4MK99_9PHAE (Uncharacterized protein n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MK99_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.130e-65 Identity = 107/172 (62.21%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 516
MNSIFPL+YSI LF FL FISY++LKQIINTQ EKKIFKLQ L+KK++ YE Y+LGQLYL+KKLF KA+++FRKA+K WD ND+IGL +LYN IGFT+F L+EY+ +IYYYK+AIKI+PD+T+ LINLGYA+EK N ++ YN Y L ++ N LA R A+++ L
Sbjct: 1 MNSIFPLLYSIALFIFLFFISYYILKQIINTQKLEKKIFKLQELVKKDDLYYEDCYQLGQLYLRKKLFLKAVVVFRKALKLWDPNDKIGLANLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLVLINLGYAFEKINSIITGYNCYKAALFWDPSNELASTRFLAVEKKL 172
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A6B7EXQ1_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXQ1_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.850e-64 Identity = 106/172 (61.63%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 516
MNSIFPL+YSIGLF FL+ ISY+++KQIINTQ EKKIF LQ L+KK+ YE Y+LGQLYL+K LF KA+L+FRKA+K WD ND+IGLG+LYN IGFT+F L+EY+ +IYYYK+AIKI+PD+T+ALINLGY++EK N + YN Y L ++ N LA R I++ L
Sbjct: 1 MNSIFPLLYSIGLFFFLSLISYYIVKQIINTQKLEKKIFMLQKLVKKDHPYYEDCYQLGQLYLRKNLFLKAVLVFRKALKLWDPNDKIGLGNLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLALINLGYSFEKVNSGITGYNCYKAALFWDPYNQLASTRFSVIEKKL 172
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F7S0_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F7S0_AKKLU) HSP 1 Score: 203 bits (517), Expect = 5.470e-64 Identity = 102/164 (62.20%), Postives = 131/164 (79.88%), Query Frame = 1
Query: 1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKR 492
MNS+FPL+YS LF FL+ IS++++KQI NTQ EKKIF LQ +K ++ SYE +YKLGQLYLKKKL+ KAIL+FR A+ W+ ND+IGLGSLYNTIGFTYF LK+Y L++YYY +AI I+PDYT+AL NLGYAYEK L +ES++ Y K L ++++N LA R
Sbjct: 1 MNSLFPLVYSAALFLFLSVISFYIIKQISNTQKVEKKIFLLQQAVKTSDPSYETFYKLGQLYLKKKLYYKAILVFRNALSVWNSNDKIGLGSLYNTIGFTYFNLKQYELAVYYYNVAITIIPDYTLALTNLGYAYEKLGLTVESHDCYKKALAWDSKNELAASR 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14897.3277.1 >prot_H-elongata_contig14897.3277.1 ID=prot_H-elongata_contig14897.3277.1|Name=mRNA_H-elongata_contig14897.3277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDback to top mRNA from alignment at H-elongata_contig14897:59..592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14897.3277.1 ID=mRNA_H-elongata_contig14897.3277.1|Name=mRNA_H-elongata_contig14897.3277.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=534bp|location=Sequence derived from alignment at H-elongata_contig14897:59..592- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14897:59..592- >mRNA_H-elongata_contig14897.3277.1 ID=mRNA_H-elongata_contig14897.3277.1|Name=mRNA_H-elongata_contig14897.3277.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at H-elongata_contig14897:59..592- (Himanthalia elongata Himel1 dioecious)back to top |