prot_H-elongata_contig148838.3273.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148838.3273.1
Unique Nameprot_H-elongata_contig148838.3273.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
[Close]
BLAST of mRNA_H-elongata_contig148838.3273.1 vs. uniprot
Match: D7FZ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ15_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.710e-24
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0 
Query:    2 AIAADERAYERTVRDRRRFAQQEKSEQEAFLRERERLKAVHQMFGKKYRTPVERLEDREIDRFLEAAFAV 71
            AIAADERAYERTVRDR+ FAQQE+SEQEAFLRERER KA+HQMFGKKYRTPVE+  DRE++R L+A   +
Sbjct: 1030 AIAADERAYERTVRDRQSFAQQERSEQEAFLRERERQKALHQMFGKKYRTPVEKCRDREMERLLDATIEI 1099
[Close]
BLAST of mRNA_H-elongata_contig148838.3273.1 vs. uniprot
Match: A0A6H5KQ85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ85_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 3.710e-24
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0 
Query:    2 AIAADERAYERTVRDRRRFAQQEKSEQEAFLRERERLKAVHQMFGKKYRTPVERLEDREIDRFLEAAFAV 71
            AIAADERAYERTVRDR+ FAQQE+SEQEAFLRERER KA+HQMFGKKYRTPVE+  DRE++R L+A   +
Sbjct: 1290 AIAADERAYERTVRDRQSFAQQERSEQEAFLRERERQKALHQMFGKKYRTPVEKCRDREMERLLDATIEI 1359
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148838.3273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ15_ECTSI3.710e-2477.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQ85_9PHAE3.710e-2477.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148838contigH-elongata_contig148838:430..1189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148838.3273.1mRNA_H-elongata_contig148838.3273.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148838 430..1189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148838.3273.1 ID=prot_H-elongata_contig148838.3273.1|Name=mRNA_H-elongata_contig148838.3273.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
KAIAADERAYERTVRDRRRFAQQEKSEQEAFLRERERLKAVHQMFGKKYR
TPVERLEDREIDRFLEAAFAV
back to top