mRNA_H-elongata_contig14875.3271.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI) HSP 1 Score: 694 bits (1791), Expect = 1.770e-234 Identity = 393/522 (75.29%), Postives = 432/522 (82.76%), Query Frame = 1
Query: 1 KGPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGPGALSPDAMALEDPEAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEER---QGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVASGGALAPLTPTDLVKHVPRKFATLWVDTASGHPAGARSSRPHVEEKTESVNGGGGDVG 1557
+GPSEVMSAHVDSVTVAKRSG N VE+Q+FHVQVDDMRRRTRMPVV+QP +SGFNSHLR +G G GA VPF+R+L++ EV T+ MPHLKSLD++LQ EMR ++DLEFVLH+L L G+LVPELTSEEVL++MCR+KAK+ VRH+VPTPAKRDLSMVYVEAFRHSTIVVRVEL VG ALSPDA ALEDPE TGGLTVLGG LTVLSVLGSS+AHVNPTFVFDELVV HYCGS GLTGLV+TALTQQAVAQGYKV+GSMELLGDPLSLV K+GDSVVQFF KTKAEMTGDA+T+GAGAKVLVKGLVGGTFGSAAKITGSLE MIRGLSGT I E+E+E EE Q EVK LEHGVK+GGKVFYE+MKAG++GLIDRP EGA+EEG AGFIAGMAKG XXXXXXXXXXX AV+RVTEGVDA+TRLSDEK MGRRRA RT SV +G AL PLTPTDLVK+VPRKFATLWV T G P EE E GDVG
Sbjct: 903 EGPSEVMSAHVDSVTVAKRSGDNVVELQVFHVQVDDMRRRTRMPVVLQPADSGFNSHLREAREGGAGGNRGA-----VPFVRLLWDKEVATLGMPHLKSLDLELQ-------EMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGKVFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPTDLVKNVPRKFATLWVGTGL-EATGVALPVPEGEEAEERDRKPAGDVG 1411
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE) HSP 1 Score: 670 bits (1728), Expect = 9.790e-215 Identity = 380/519 (73.22%), Postives = 422/519 (81.31%), Query Frame = 1
Query: 1 KGPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGPGALSPDAMALEDPEAVTGGLTVLGGSSLTVLSVLGS---------------------------SLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEER---QGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVASGGALAPLTPTDLVKHVPRKFATLWVDT 1467
+GPSEVMSAHVDSVTVAKRSG N VE+Q+FHVQVDDMRRRTRMPVV+QP +SGFNSHLR D G GG R A VPF+R+L++ EV T+ MPHLKSLD++LQ EMR ++DLEFVLH+L L G+LVPELTSEEVL++MCR+KAK+ VRH+VPTPAKRDLSMVYVEAFRHSTIVVRVEL VG ALSPDA ALEDPE TGGLTVLGG LTVLSVLGS S+AHVNPTFVFDELVV HYCGS GLTGLV+TALTQQAVAQGYKV+GSMELLGDPLSLV K+GDSVVQFF KTKAEMTGDA+T+GAGAK+LVKGLVGGTFGSAAKITGSLE MIRGLSGT I E+E+E E+ Q EVKDLE GVK+GGK+FYE+MKAG++GLIDRP EGA+EEG AGFIAGMAKG XXXXXXXXXXX V+RVTEGVDA+TRLSDEK MGRRRA RT SV +G AL PLTP DLVK++PRKFATLWV T
Sbjct: 2537 EGPSEVMSAHVDSVTVAKRSGDNVVELQVFHVQVDDMRRRTRMPVVLQPADSGFNSHLR---DAREGGAGGNRGA--VPFVRLLWDKEVATLGMPHLKSLDLELQ-------EMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSPDAAALEDPETTTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGKIFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVPTGRALPPLTPIDLVKNIPRKFATLWVGT 3043
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA) HSP 1 Score: 360 bits (925), Expect = 8.670e-114 Identity = 228/519 (43.93%), Postives = 297/519 (57.23%), Query Frame = 1
Query: 85 IFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRG-GGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGPGALSPDA-----------------------------------------MALEDPEAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYK---------------------------VLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGK--------VFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVASGGALAPLT 1410
+ HVQ+DDMR R R PVV+QP +SG+NSH+R +PF+ I YE EV T+ MPH KS +V LQ + +D++FVLH+L +A ++PE T VL ++ AK A+RH++ PA+ D S+VY+E FRH+ I V++EL VG ALS + +A EDP+A GGL VLGGS L+ + VLG +LA ++PTFVFDEL+V HY GS R L + L QQ VAQGYK V+GSMELLGDPL+LV+K+ DSV+QF T+AE G+ T GAGA++LV G+VGG FGSAAKI GSLE++IRGLSGTE+ + E G + R V+ L+HG + GG+ V Y+S++ G+SGL+DRP EGA+EEG AGF+ GMAKGIV GAV++VTEGVDA+TR + MGRRR PR S G LA LT
Sbjct: 85 VLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQ-------QCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAA--AKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVAD--AEGGGDTR---VRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPR----SAQPGCPLAVLT 584
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA) HSP 1 Score: 297 bits (760), Expect = 3.700e-91 Identity = 181/479 (37.79%), Postives = 275/479 (57.41%), Query Frame = 1
Query: 4 GPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTT-MSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGPGALSPDAMALEDPEAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVASGGALAPLTPTDLVKHVP 1437
G E++SA D + + K G + ++HVQVDDMR ++PVV QP +SG+NS LR + + VPFL+ +E + + M HLKSL V +Q +M+T +D++FVL V LA V +L+ + + + A+ A++H + P + ++Y+E HS+IVV++E++VG L+ D +A ++ G+ ++G S ++L VLGSSLAH+NPTF F+EL + G L + +L +Q VAQGYKV+GSMELLGDP+SLVS +G V QFF KT A+M G++ T G G K L +G+VGGTFGS AKITG+ + ++ ++G R++ + + G+ G + + + G++G++ RP EGAQ+ G GF+ G+ KG+V GAV+ VTE VDA + DE+ MGRRR R + G L PLT + L +++P
Sbjct: 66 GSMELLSATTDIIFLRKLGGSDMTIFSVYHVQVDDMRPNAKLPVVFQPVDSGWNSGLR------------SDSLRDVPFLQCSFERDPASGHDMLHLKSLQVIVQ-------QMQTKLDIDFVLQVASLAARSVRQLSESDAMEQASLTSARHAIQHRIKAPHYTNSGLIYIETLYHSSIVVQLEVMVGSRNLNTDDLADDEQR----GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNWQRPEH---------VGQGIVIGSERVWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTR------SGTGLLQPLTVSHLNENIP 506
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A7R9UEM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM8_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.670e-61 Identity = 163/503 (32.41%), Postives = 247/503 (49.11%), Query Frame = 1
Query: 4 GPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWEMRTHIDL-EFVLHVLG-----------------------LAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDL----------------SMVYVEAFRHSTIVVRVELLVGPG-------ALSPDA--MALEDP---EAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQE-EGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRR 1353
G E+++ D + + K+ G + E+ +FH+Q+DD+RR+ R PVV++P ++GFNSHLRG +A L+PFLR++YE EVT + H K ++ L + H ++R I L F + + L E ++ + A+ + PA + ++YVE H IV+++E+L G +L P A ++L+ P E T L +LG L L+ L S+ AH +P FVF E V ++ G + L + L Q VAQ YK+ GSME+LGDPL+L +KVG+ +VQFF T AE+ G+++ G G + L +G+VGG SA+KI+G+LEEMI GL ++ + + + + GV EGGKV S+ G+ GL D P+ + EG AGF+ G+ KG+ GA VT VDA L D +G+RR
Sbjct: 1827 GGMELVTFTADGMELRKKGGSDRTELSVFHMQIDDLRRKARFPVVLRPVDTGFNSHLRGSN---------GKATELLPFLRVMYEREVTATKIQHFKMIEGVLGRVQVHV-DVRPMISLVRFFVKCVSRPADGDESDAQDTNGARYKSFSELDDASAQEQSNRDSFRGGADATARRGQAERISGPALKGCLLILKDRIEPLGHVSSGLIYVEHLHHGPIVLQLEILANIGDQNAIATSLDPAANPLSLDSPFSSEDETA-LALLGNQVLGALTALVSTFAHASPIFVFGECEVDNFFGQRKDLVRTLTLGLVHQGVAQSYKLFGSMEVLGDPLALANKVGEGMVQFFRATGAELRGESDFKGEGLRRLAQGVVGGAAQSASKISGTLEEMISGLGLGQLGPNHVLAADGTIMKKPRHIGEGVVEGGKVMITSLTRGVLGLYDHPRLAIENAEGVAGFVGGVGKGLAGLVVSPVAGVLGAFRTVTASVDATLHLWDLVPLGQRR 2318
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI) HSP 1 Score: 192 bits (487), Expect = 9.250e-49 Identity = 147/475 (30.95%), Postives = 227/475 (47.79%), Query Frame = 1
Query: 4 GPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLR----GGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHL---KSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGP---GALSPDAMALEDPEAVTGG---------LTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPL 1371
GPSE+ + VD+ + K SG V + ++H Q+DDMR + P+++ P +GFNSHL G GS P R+ E +V H+ +S+++ L K H+D + + A + E +R + A + +Y+ + I V V+ +G LS A D E GG L +GG +LS G+ +A+ +PTF FD + HY GS LV+ + +Q V Q YKVLG +++LGDPLSL + V+ F KT A +G G+K LVKG+VGGT SA+K+T +L+ +R + E +G E + + L G+ +G F ++K G++G++ +P GA++ G AGF+ G+ +G+V GA +++T G+DA TRL D++ MGRRR PR PL
Sbjct: 2403 GPSELAAFTVDNFELGKPSGTPGVTVSVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS-------------PAFRVEVERDVEVSLTHHMWVIRSIEMCLG-----KVHCAVHVDFWIDVQDVVFASLNWTNSSPAEARARAIADTQGVVGNLLQAPAADATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPPADGDEEKDEGGFGASLAMMPLGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDA---EAPSGMESTKA-PEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPRHPL 2849
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.390e-44 Identity = 137/473 (28.96%), Postives = 224/473 (47.36%), Query Frame = 1
Query: 223 ATLVPFLRILYESEVTT--MSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTL------------------------------------VPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDL---SMVYVEAFRHSTIVVRVELLVG----------------PGALSPDAMALEDP--EAVTGGLTVLGGSSLTVLSVLGSSLAHVNP-TFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGT--------EIREDETET------------------GYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVA 1383
+ LVP +R+ E E+ T + H + L++ +Q E+ +DL+ + ++ G L + + S ++ R+ R K + VP A + +VY+E F HS+++V +EL+ G PG ++ L+ EA+ GL ++G + +L+ + SLA ++ T VF+EL+ HY GS L +V+ +L QQA+ Q YK+LG+M+LLG+PL+L G VV+FF +T+AE+ GDA++ G G + L K ++GG F S +KITG++ ++ + G E DE + G+ R + L G+ +GG+VFY+S+K+G+ + D P++GA EGF+GF+ GM KG+V G ++RVT D + + RRRA R L S A
Sbjct: 3782 SNLVPLVRVTAEPELHTPWSEVVHFRGLELSVQ-------ELEMRVDLDTLFSLVAYIGRLSRFDSEREERAATAGDIYHHYYNQHRDPSMRSLRTNIMDEKSISLVRRLLRSKVR------VPDAALSEAVGQRLVYIELFHHSSLIVGMELVPGGGNFPSRKERAKQTGLPGNRMDGSLGLDQELDEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRVT---DTTAYFEKPRILRRRRAVRVALESQA 4238
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.200e-41 Identity = 153/475 (32.21%), Postives = 229/475 (48.21%), Query Frame = 1
Query: 4 GPSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLR----GGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHL---KSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVPELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGP---GALSPDAMALEDPEAVTGG---------LTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPL 1371
GPSE+ + VD+ + K SG V + ++H Q+DDMR + P+++ P +GFNSHL G GS P R+ E +V H+ +S+ + L K H+D F + + A + E +R + A + +Y+ + I V V+ +G LS A D E GG L +GG +LS G+ +A+ +PTF FD + HY GS V+ + +Q V Q YKVLG +++LGDPLSL + V+ F KT A +G G+K LVKG+VGGT SA+K+T +L+ +R + E +G E ++ + L G+ +G F ++K G++G++ +P GA++ G AGF+ XXXXXXXXXXX +++T G+DA TRL D+ MGRRR PR PL
Sbjct: 1309 GPSELAAFTVDNFELGKPSGTPGVIVSVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS-------------PAFRVEVERDVEVSLTHHMWVIRSIKMCLG-----KVHCAVHVD--FWIDDVVFASLNWTNSSPAEARARAIADTQGVVGNLLQAPAADATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPSADGDEEKDEGGFGASLAMMPLGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKT------GAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDA---EAPSGMESKKA-PEHLGQGLTQGMMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPRHPL 1753
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: A0A485KYR2_9STRA (Aste57867_13032 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYR2_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.710e-33 Identity = 126/465 (27.10%), Postives = 216/465 (46.45%), Query Frame = 1
Query: 7 PSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWE---MRTHIDLEFVLHVLGLAGTLV-PELTSEEV-LSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAF---RHSTIVVRVELLVGPGALSPDAMALEDPEAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELV----VMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSM-GRRRAPR 1362
P EVM+ +D + V + + + H QVDDM RR P+V+ PT+SGFNS+ + G G PF ++ +S D ++ S++ E M ++L+++L VL + ++ P T EE+ + + + L R VP A M + + H +V+ +PE GL+ + G+ T S++G +AH+ P+F + ++Y LR ++ ++ ++Q YKV+GS+ELLGDP+ LV ++ D +TK + TG + + G GA L+K ++G G+ K++ + ++++ + + +E E E + GV +GG VF S+ G+SGL+ +P EGA++ GF GF G+ +G + G V ++++ V T L DEK G RR R
Sbjct: 2180 PREVMNITMDGLRVTSPAQSTCMTYDLHHFQVDDMSRRAMYPIVICPTDSGFNSNKKEGWLVEHGEH---------PFFHMVSDSYT-----------DANMLISDQFLVELGSMDIQLNLDYILDVLDVFFAILWPPQTEEEMEQAGIVAVEELLNKRLHVPDAASLGQLMYFKKCLIQSYHLNVVLN-----------------SNPEDSDSGLSKMLGA--TAGSIVGG-IAHIQPSFFIQSISREDRFLYYDDFLRNT--VIWESIVMGCISQWYKVVGSVELLGDPVGLVHEITDGFALAVRQTKRDFTGKSRSKGQGAVTLMKTVIGAPSGAIGKMSNGVGDLLKKATHFDSQEMENEPRH---------FPEGVLQGGMVFGMSLAHGVSGLVTKPMEGAKQNGFGGFAKGVGQGALGLVASPFVGAIGVVEKLSQSVHNTTHLMDEKYFEGTRRIAR 2593
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Match: F0WGQ6_9STRA (Uncharacterized protein AlNc14C94G5783 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGQ6_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.310e-33 Identity = 123/477 (25.79%), Postives = 221/477 (46.33%), Query Frame = 1
Query: 7 PSEVMSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSHLRGGGDGSGGFRGGARAATLVPFLRILYESEVTTMSMPHLKSLDVDLQASEEHKWEMRTHIDLEFVLHVLGLAGTLVP-ELTSEEVLSRMCRQKAKLAVRHSVPTPAKRDLSMVYVEAFRHSTIVVRVELLVGPGALSPDAMALEDPEAVTGGLTVLGGSSLTVLSVLGSSLAHVNPTFVFDELVVMHYCGSLRGLTGLVLTALTQQAVAQGYKVLGSMELLGDPLSLVSKVGDSVVQFFHKTKAEMTGDANTMGAGAKVLVKGLVGGTFGSAAKITGSLEEMIRGLSGTEIREDETETGYEERQGEVKDLEHGVKEGGKVFYESMKAGLSGLIDRPKEGAQEEGFAGFIAGMAKGIVXXXXXXXXXXXGAVARVTEGVDAATRLSDEKSMGRRRAPRTPLTSVASGGALAPLTPTDLVKHV 1434
P EV++ ++++ + ++G + + + H+Q+DDM + PVV+ P +SGFNS G G R PF + + T +P + D++L + ++ +I+LE+V+ V L + +P + ++ + + AKL + P P ++Y +R S + D++ E E G++ GS+L S++G +AHV P F ELV + L V+ ++ + Q YK++GS+E LGDP+ L + + D + K +++G + G A +L + +VG S K++ L ++++ + + +E+ E + + G+ +GG VF +S+ G+SG + +P GA+E GF GF GM G + GAV + ++ V+ T L DEK+ R P L S AL PL + ++ V
Sbjct: 2333 PREVVNFTMETIRIESKAGTRAICVSLHHMQIDDMTSTAQYPVVLAPLDSGFNSDKMEGWMHEDGER---------PFFTMKVVTAPQT-GLPIIDDFDIELHS-------IKANINLEYVITVGNLLASFIPGNDEATKIQYGIDEKNAKLDLTLGYPEPVNTQGMLMYFRHWRLSGFNFHLVF---------DSVQEERGE----GISYFLGSTLG--SIIGG-IAHVTPDISFSELVYENRFFYEYDLIFAVVWSIVYSVLGQWYKIVGSVEFLGDPVGLATDIVDGFALAARQLKRDVSGKSRRKGESALILAQTVVGAPSKSIGKVSNGLGDLLKKATRFQSQEEPEEPRH---------VPEGILQGGIVFTKSLAHGVSGFVGQPVRGARENGFKGFAKGMGFGTLQLVACPIVGTLGAVEKFSQSVNNTTHLLDEKNYDGTRRPARNL----SESALKPLADSVVITEV 2763 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14875.3271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14875.3271.1 >prot_H-elongata_contig14875.3271.1 ID=prot_H-elongata_contig14875.3271.1|Name=mRNA_H-elongata_contig14875.3271.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp MSAHVDSVTVAKRSGGNPVEIQIFHVQVDDMRRRTRMPVVVQPTNSGFNSback to top mRNA from alignment at H-elongata_contig14875:2594..7819- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14875.3271.1 ID=mRNA_H-elongata_contig14875.3271.1|Name=mRNA_H-elongata_contig14875.3271.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5226bp|location=Sequence derived from alignment at H-elongata_contig14875:2594..7819- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14875:2594..7819- >mRNA_H-elongata_contig14875.3271.1 ID=mRNA_H-elongata_contig14875.3271.1|Name=mRNA_H-elongata_contig14875.3271.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig14875:2594..7819- (Himanthalia elongata Himel1 dioecious)back to top |