mRNA_H-elongata_contig1484.3256.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1484.3256.1
Unique NamemRNA_H-elongata_contig1484.3256.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: D7FR55_ECTSI (Cilia- and flagella-associated protein 206 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR55_ECTSI)

HSP 1 Score: 844 bits (2181), Expect = 3.800e-301
Identity = 446/666 (66.97%), Postives = 532/666 (79.88%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDH----LEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDK-RGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTG 1983
            M+EI ELV++VV+QCASRGV VSEVLAAFVARTVI+K    G+  +SL+ PL++EG+GDL+D +VDRLLEV+SPSLETIKMQ A DSSYITE+E L+N +QRR  RL+++QR+I  MRPK GADFDALT LHRQIF++LLRHAS+D R+GRGVEREVAAALESVFPRISLKAFINLG+EEK+AQLDELANIVLGIRVFNQHIGKGGVNIP+P++++A LL  + + LS+EL++ Q TC ELQQ+IV+S LRHPQGVTA+MLS WKDELTN+RQ+LSYLQSLQED+ VSDRKV  LR+ I SEM DLEELVGNRASVPKEHVYPKFYEIA  WTA Y EY+V+ GR +T +VL+ F  SYTP+ R G+++++G E++ALEE A AAEAA+  T          E    +    E    + EG + D    +  + +    +      + +     E+PVKLSIESTPEFMQLPLEYQGFC WTIVKRQGLLLPGKPELGVIRYKNRFFVFAH+VAI +F  DPELF+K  L+RAV SPELI+LLRL DSFPETCITRMLQG     GK R S+ L+  E+REA T+TPVH  E+ ++  YHWNEW LRRRALQ+ANLR CVTKSQQTD SH+RR N TQVYLPRA HTQTN+++G+KP RHVQYF G
Sbjct:    1 MDEIQELVRKVVRQCASRGVTVSEVLAAFVARTVIQKPGLNGQALFSLNSPLTQEGLGDLIDRSVDRLLEVDSPSLETIKMQVAVDSSYITEEEGLMNSHQRRTARLREMQRTIATMRPKDGADFDALTALHRQIFSYLLRHASDDSRLGRGVEREVAAALESVFPRISLKAFINLGSEEKYAQLDELANIVLGIRVFNQHIGKGGVNIPHPEQEAATLLLDMGRVLSDELEQAQQTCAELQQIIVHSELRHPQGVTADMLSRWKDELTNKRQYLSYLQSLQEDMAVSDRKVGLLRDTIRSEMRDLEELVGNRASVPKEHVYPKFYEIATHWTALYREYKVISGRTRTTDVLRAFRDSYTPTIRGGMDIQSG-ELSALEENARAAEAAVGITSTNVEPTGATENKPPLGYTNEGKDADEEGRRGDTSDHIEEQPVPGGQEPAIVRREDQ---SIEQPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHEVAISTFMSDPELFLKATLERAVASPELIHLLRLQDSFPETCITRMLQGGKNGNGKVRPSLALAPPEKREAGTDTPVHFIEKCIDPEYHWNEWVLRRRALQVANLRNCVTKSQQTDGSHFRRVNDTQVYLPRAKHTQTNRNSGTKPPRHVQYFGG 662          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A6H5JGH8_9PHAE (Cilia- and flagella-associated protein 206 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH8_9PHAE)

HSP 1 Score: 631 bits (1627), Expect = 2.420e-218
Identity = 353/588 (60.03%), Postives = 431/588 (73.30%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQ-----------------------------------------------------IFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGE-REGTKTDDD--KCMTLKEIQRDTQDLSRMAQI--EVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAV 1590
            M+EI ELV++VV+QCASRGV VSEVLAAFVARTVI+K    G+  +SL+ PL++EG+ DL+D +VDRLLEV+SPSLET+KMQ A DSSYI+E+E L+N +QRR  RL+++QR+I  MRPK GADFDALT LHRQ                                                     IF++LLRHAS+D RVGR VEREVAAALESVFPRISLKAFINLG+EEK+AQLDELANIVLGIRVFNQHIGKGG+N+PNP++++A LL  + + LS+EL++ Q TC ELQQVIV+S LRHPQGVTA+MLS WKDELTN+RQ+LSYLQSLQED+ VSDRKV+ LR+ I SEM DLEELVGNRASVPKEHVYPKFYEIA  WTA Y EY+V+ GR +T +VL+ F  SYTP+ R G+++++G E++ALEE A AAEAA+   I   ++E   T +   +  +G+  EG   D++  +  T   I+       +   I       TE+PVKLSIESTPEFMQLPLEYQGFC WTIVKRQGLLLPGKPELGVIRYKNRFFVFAH+VA+ +F  DPELF+K  L+R +
Sbjct:    1 MDEIQELVRQVVRQCASRGVTVSEVLAAFVARTVIQKPGLNGQALFSLNSPLTQEGLSDLIDRSVDRLLEVDSPSLETMKMQVAVDSSYISEEEGLMNSHQRRTARLREMQRTIATMRPKDGADFDALTALHRQVPLIPTYFYSFTVEMPIVDVNNRKHCVRSYPLSLRCTAAAHLGLGYARGMSMQIFSYLLRHASDDSRVGREVEREVAAALESVFPRISLKAFINLGSEEKYAQLDELANIVLGIRVFNQHIGKGGINVPNPEQEAATLLLDMGRVLSDELEQAQQTCAELQQVIVHSELRHPQGVTADMLSRWKDELTNKRQYLSYLQSLQEDMAVSDRKVSLLRDTIRSEMRDLEELVGNRASVPKEHVYPKFYEIATHWTALYREYKVISGRTRTTDVLRAFRDSYTPTIRGGLDIQSG-ELSALEENARAAEAAVG--ITSTNVEP--TGATENKPPLGDTNEGKDADEEGRRGDTSDHIEEQPGPGGQGPAIVRREDQSTEQPVKLSIESTPEFMQLPLEYQGFCSWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHQVAMATFMTDPELFLKATLERFI 583          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A835YXN0_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN0_9STRA)

HSP 1 Score: 632 bits (1629), Expect = 1.640e-217
Identity = 341/663 (51.43%), Postives = 455/663 (68.63%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTT-RRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLS---RMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGKPRSSVGLS-AAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQY 1974
            MEEI +L+  +V+QCA+RG+ V EVLAA VARTVIE        P +SLD PLS EG+  L+D++V RLL  +SP +ET++MQ AFD++Y+ E++ L     RR  RLK++QR+I  ++P+ GADF+ALTT+HRQIFT+LL+HA       R VEREVAAALESVFPRISLKAFI L +EEK+AQL+ELA+IV GIR+FN+HIGKGG  +P+ D D+AALL +L   L  E+++TQ  C   Q VIV  ++  PQG+T  ++  WKDEL NRRQ+L+YLQS+QEDV +S+RKV S+RE+++ E++DL +LV N+ASVPKEHVYPKF E++ QW A + E +VL  R   + VL+ + +SYT +  E +++     + A  EE   AE+  D   I  H ++    S  G      + G+    D   T      D   ++    M         ++PV+LSIESTPEFMQLPLE+QGFCPWTIV R+GLLLPG+PELGV R++N  +VFAHKVA  +F K PE  + G L+RA+QSPELI+LLRL DSFP   I RML+G        +      AA + +A TETP+H  ++ ++  Y WNEWTLRR+ALQ+ANLR C T +QQTD SH+RR NTTQV+LPR   TQT +S+G+ P R V++
Sbjct:    1 MEEIDKLIAEIVQQCAARGIAVPEVLAALVARTVIETANGAHSMPLFSLDAPLSSEGINKLIDVSVARLLADDSPPMETLRMQVAFDTTYVREEKELEVKASRRAARLKELQRAIVQLKPRDGADFEALTTMHRQIFTYLLKHAHEGSEADRTVEREVAAALESVFPRISLKAFITLTSEEKYAQLEELASIVFGIRLFNKHIGKGGNRVPDADADAAALLAELSAELLVEVEQTQIACRRYQDVIVLMYMHQPQGLTIEVVDRWKDELANRRQYLAYLQSVQEDVIISERKVRSVRERLARELSDLRQLVENKASVPKEHVYPKFDEVSTQWRALFRELQVLRSREAAYAVLRKYKASYTSTLVESMDV-----VRAAYEEQAPAESK-DAPAIEAHSDSKSVGSGRGSSRGSNKPGSSAQQDDPRTAAVTAADVTPIASTDEMIDTAAARAKDKPVRLSIESTPEFMQLPLEFQGFCPWTIVNRRGLLLPGRPELGVQRWRNAHYVFAHKVAAEAFQKSPEALVHGVLERAMQSPELIHLLRLQDSFPNVSIMRMLRGDGLLADGGAGAAKGPAAVKCDAGTETPLHFADKNIDHSYSWNEWTLRRKALQIANLRKCATTAQQTDDSHFRRENTTQVWLPRLTGTQTMRSSGNNPPRQVRF 657          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN)

HSP 1 Score: 485 bits (1248), Expect = 1.150e-155
Identity = 292/682 (42.82%), Postives = 403/682 (59.09%), Query Frame = 1
Query:   43 CASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLR---------------HASNDP-RVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYT-------PSFREGVELKTGSEMT---ALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGK---PRSSVG-----LSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            CA RG  V  VLAAF+ART++E         +S ++ L+ EGV  L+ +++ RL E ++PSLETIKMQ AFDS+Y+  +E L    + R+ + +++ R+I  ++P+   DF+ LT L+RQIFT+LL                 A+ DP  + R VERE+AAALESVFPRI LK+F+ L +EEK  QL+ELA IV GIR+FN+  GKGG  + + +   A  +  L  AL  E  +        Q+ +VY HLR P GV    L  W  EL NRRQ+ +YL SL ED   S R+V   RE+ ++EM++L+ LVG RASVPKEHVYPKF  IA  W A   E RV+  R+ T E L  F  SY        P +R    L++ ++     A+++EA  AEA     + GD   AA    V G  +      +  +DD    L ++    +D + +           PV+LS+E+TPEFMQLPLEYQGFC WT+  R GLLLPGKP LGV++Y+   +VFAH VA+ +F   PE   +G + +A  +PEL++LLRL DS+P T I ++L      GK   P  +       L+ A  R+AST+TPVH  E+ ++  Y WN+W LRRRAL++A L+ C T SQQTD SH+RR NTTQV+LP+   TQ+ +   + P   +QYF G+
Sbjct:  349 CAGRGQRVPAVLAAFIARTILESDPLL----FSPEKELTSEGVDTLIRMSIARLCEKDAPSLETIKMQVAFDSTYVRFEEELDKSRKAREEKKRELVRAILAVKPRGSTDFETLTALYRQIFTYLLHVSRGGSGLPGAPSNTTAAEDPGSMERAVEREIAAALESVFPRIGLKSFVQLSSEEKRLQLEELARIVTGIRLFNREGGKGGAGLDHVEDAVATTVSDLRDALDAETAEQHDLALRYQETLVYCHLRQPPGVAPAQLERWAQELANRRQYGAYLTSLAEDAAASARRVQVHRERFATEMDELQALVGGRASVPKEHVYPKFDAIATAWFALDDELRVVESRVATLEELHQFRESYNMTCGANHPVYR-AARLESHAKPDGGGAVDDEAEMAEAV--SKLGGDQAAAAVAAPVEGAPSAA----SAAEDDDAKALDDLPTGARDNADV-----------PVRLSVETTPEFMQLPLEYQGFCGWTVANRHGLLLPGKPALGVVKYRGSCYVFAHAVALKAFMDAPEAVREGVVAQATLAPELVHLLRLQDSYPGTSIAKILASRAITGKGAEPGQATAVAKALLAPAATRDASTDTPVHFVEKHIDPAYEWNDWALRRRALRLAQLKHCATTSQQTDESHFRRNNTTQVFLPKIASTQSRKDGETNPPVRIQYFKGL 1008          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A8J2WV84_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WV84_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 4.010e-152
Identity = 283/691 (40.96%), Postives = 389/691 (56.30%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFL--------------LRHASNDPR-VGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGS-DKRGKPRSSV-------------GLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            MEEI ++V  + + CA +G  V +VLAAF+ART++E         +S ++ LS EG+  LV + + R  + + P+LETIKMQ  FDS+Y+  +E L    + R  + KD+ RSI  +RPK G DF+ LT L+RQIF++L              L  A  DP  V R VERE+AAALESVFPRI LK+F+ LG EEK  QL+ELA IV GIR+FN+  GKGG  + + +   A  +  L +AL  E+ +    CT  Q+ +VY HLR P   TA  L  W  EL NRRQ+ +YL SL ED   S R+V + R+  +SEM++L+ +VG RA+VPKEHVYPKF  +AA W A   E RV+  R+   E L  F  SY  +                               +G H   ++   + G     + E   + D           D  DL +       G    PV+LS+E+TPEFMQLPLEYQGFC WT   + GLLLPGKP LGV+RY+   +VFA   A+  FFKDPE   +G +  A + PEL++LLRL D +P T I ++L  +  KR   R  V              L+    ++A+ ETP+H  E+ ++  Y +NEW LRRRAL++A L+   T S QTD+S YRR N +QV+LP+ + TQT + +G++P   +QY  G+
Sbjct:    1 MEEIDDIVTDIAQGCAGKGQRVPKVLAAFIARTILESDPVL----FSPEKELSNEGIETLVRMGIARCCQKDDPALETIKMQVTFDSTYVRYEEELAQSNEARANKTKDLIRSIIGVRPKGGTDFETLTALYRQIFSYLQFVSRGQGGLDGKGLSQA--DPAAVERAVERELAAALESVFPRIGLKSFVLLGAEEKRLQLEELARIVTGIRLFNREQGKGGAGLDHVEDAVATTVSDLREALDAEVAEQHEVCTRYQETLVYCHLRKPDEATAENLERWAQELANRRQYCAYLASLAEDAAASARRVAAQRDAFASEMDELQGMVGGRAAVPKEHVYPKFDAVAAAWFALDEELRVVESRVAVLEELHAFRESYAAT-------------------------------LGPHSAVSRQARLEGPPI--QDEAAPSPDKPEXXXXXXXXDFDDLPQ-------GDEGGPVRLSVETTPEFMQLPLEYQGFCGWTCANKGGLLLPGKPGLGVVRYRGAHYVFASAEALRDFFKDPEGARQGVVAAATKRPELVHLLRLQDQYPGTSIAKILAAAASKRAASRGGVEGQRTAQGXXXXXXLAPPVMKDAACETPLHFVEKNMDPSYEFNEWALRRRALRLAALKKSATTSCQTDASSYRRDNASQVFLPKISSTQTRKESGTQPPLRIQYLQGI 645          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A1V9Z5I6_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5I6_9STRA)

HSP 1 Score: 454 bits (1168), Expect = 6.450e-148
Identity = 268/668 (40.12%), Postives = 392/668 (58.68%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQ--GVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVE--LKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEIT--VGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            M+ I +++  V+ +C   GV VS+ LAAFV RT++++ T      +SL+  +   G+  L + +VD LL+ +SPSLETIKMQ  FD  Y+  +E +      +D ++ ++ RSI  ++P    DF+ LTTL+RQIFT L+ HA+ D    R +EREVAAALESVFPRI LK+F+++  E+K  QL ELANIV GIR+FN+ IGKGG  I          +  + + +S+E+++   TCT+  +V+++ H  + Q  G   N+   W++EL N+RQFLSY+QSL ED+ VS  K+  L     +E+N L+ LVG+R+S+PK  VYP F  ++  W     E+++LL R ++ + L  F  SYT +  +  E  LK        +EE              +H E    I      T  + +  G  T+ +               +    +E       PV++S++STPEFMQLPLEYQG+CPWTIV+R GLLLPG P LGVI+Y N + VF ++ A+  F  +P+ +I       V  PELI LLRL +SFPET +  +++  + + +    +   A  + +AST TPVH  E+ ++  Y WNEW+LRRRAL++ANLR C T S QT  S++R  N TQV+LP+ N TQT    G+ PT+ V YF G+
Sbjct:    1 MDRIGKVIGDVIARCKYEGVVVSDTLAAFVCRTIVQENTN----VFSLEGEIDAAGITQLTEKSVDMLLQKDSPSLETIKMQLDFDLCYVKYEEEVEKAQTLKDKKVTNLHRSIVALQPSGTGDFETLTTLYRQIFTLLMVHANADKANDRNIEREVAAALESVFPRIGLKSFVSMSPEDKKFQLKELANIVGGIRLFNREIGKGGAGITLSLDTIRENVKSISQLVSQEVEEVNQTCTDYTEVLLHIHHYNVQVTGGPVNV-KRWQEELNNKRQFLSYMQSLHEDIDVSSEKIQRLIATFENELNTLKSLVGSRSSLPKGQVYPVFEALSKAWEELGLEHQLLLARSRSIKALMEFKDSYTRTLAQQSEWILKAKRAGMPPQEEWF------------EHSEPDNQIFALSTATNAIQKDSGEATEGNFYKAA----------NNNLYVEGTVSESGPVRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYHNAYHVFVNEHALNDFMANPDKYIAAVHAYVVHKPELIYLLRLQESFPETSMASLMKLLNNKTQVHPLLAPHAVLKVDASTSTPVHFVEKNIDVNYEWNEWSLRRRALRVANLRNCKTVSAQTTLSNFRANNETQVWLPQDNTTQTGHDKGTNPTKTVTYFAGL 641          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A485LQG7_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQG7_9STRA)

HSP 1 Score: 452 bits (1162), Expect = 2.960e-147
Identity = 262/666 (39.34%), Postives = 387/666 (58.11%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIP---NPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVY-SHLRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            M+ I ++V  ++ +C   GV VS+ LAAF+ RT +++ + R    + LD  +  +GV  L   +V  LL+ +SPSLETIKMQ  FD  Y+  +E +  F   +  ++ ++ RSI  ++P    DF+ LTTL+RQIFT L+ HA  +    R +EREVAAALESVFPRI LK+F+++  ++K  QL ELA+IV GIR+FN+ IGKGG  I     P       +  + K  SEE+++    CTE  +V+++  H      VTA  +  W++EL N+RQFLSYLQSL ED+ VS  K++ L     +E+N L+ LVG+R S+PK  VYP F  +A  W     E+++LL R ++ + L  F  S+T +     E    ++   +  +              D  E +            E E    +    +T  E +  T D S    +        PV++S++STPEFMQLPLEYQG+CPWTIV+R GLLLPG P LGVI+YKN + VF ++ A+  F  +P+L++    D  V+ PELI LLRL +SFP+T +  +++ ++ R      +  +A ++ +A T TP+H  E+ L+  Y WNEW+LRRRA+++ANLR   T S QT  S++R+    QV+LP  N TQT    G+ PT+ + YF G+
Sbjct:    1 MDRISKIVADIIARCKYEGVEVSDTLAAFICRTAVQEDSNR----FCLDGDVDSDGVAALTQRSVTSLLQKDSPSLETIKMQLDFDLCYVKHEEEVEKFRAAKAKKISNLHRSIVLLQPSGTGDFETLTTLYRQIFTLLMVHADAEKSGDRNIEREVAAALESVFPRIGLKSFVSMAPDDKKFQLKELASIVGGIRLFNKEIGKGGAGISLSLGPSHTIRDNVTSVSKLASEEVEEANQVCTEYTEVLLHIHHYNVKDNVTAERVKRWQEELNNKRQFLSYLQSLYEDIDVSTEKISRLTSSFDNELNTLKALVGSRTSLPKGQVYPVFEALAKAWDELEAEHQLLLARSRSIKSLMEFKDSFTRTLSPQSEWILKAKRAGMPPQE-------------DWFEHS------------ESENQPKNALGAVTRHEAKEGTADDSNGNDV--------PVRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYKNAYHVFVNERALDEFMANPQLYVSAVHDFVVRKPELIYLLRLQESFPDTSMASLMKMTNNRTHVHPLLAPNAVQKVDAGTSTPIHFVEKNLDVNYEWNEWSLRRRAIKIANLRNYKTVSAQTTLSNFRKDVDQQVWLPTDNTTQTGHDKGTNPTKTITYFAGL 629          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A1V9Z275_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z275_9STRA)

HSP 1 Score: 441 bits (1135), Expect = 3.260e-143
Identity = 258/666 (38.74%), Postives = 386/666 (57.96%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAA-LLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVT-ANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVE--LKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            ++ I ++V  ++ +C   GV VS+ LAAF+ RT++++ T      + LD  +   G+ +L   +VD LL  +SPSLETIKMQ  FD  Y   ++A       +D ++ ++ RSI  ++P   +DF+ LTTL+RQIFT L+ HA  D    R +EREVAAALESVFPRI LK+F+++  ++K  QL ELANIV GIR+FN+ IGKGG  I     D+    +  + K++ +E++    TCT+  +V+++ H  + Q  + A+ L  W++EL N+RQFLSY+QSL ED+ VS  K+  L     +E++ L+ LVG+R S+PK  VYP F  +A  W     E+++LL R ++ + L  F  SYT +     E  LK        +EE                                  E ++ D+   +T        +D    A  +     + P+++S++STPEFMQLPLEYQG+CPWTIV+R GLLLPG P LGVI+Y+N + VF ++ A+  F   P+ +I       V  PELI LLRL +SFP+T +  +++  + +      +   A  + +AST TPVH  ++ ++  Y WNEW+LRRRAL++ANLR C T S QT  S++R+   +QV+LP+ N +QT    G+ PT+ V YF G+
Sbjct:    2 LDRIGKVVGDIIARCKYEGVVVSDTLAAFICRTIVQENTN----VFCLDGDIDAAGINELTQRSVDMLLRKDSPSLETIKMQLDFDLCYEEVEKA----QAMKDKKIANLHRSIVALQPSGTSDFETLTTLYRQIFTLLMVHADADKANDRNIEREVAAALESVFPRIGLKSFVSMSPDDKKFQLKELANIVGGIRLFNREIGKGGAGITLSLADTIRDNVTSIAKSVDQEVEDANQTCTDYTEVLLHVHHYNAQSASGASALKRWQEELNNKRQFLSYMQSLHEDIDVSSDKIQRLITTFETELSTLKSLVGSRTSLPKGQVYPIFEALAKAWDELDVEHQLLLARSRSIKALMEFKDSYTRTLGPQSEWILKAKRAGMPPQEEWF--------------------------------EHSEPDNQALLTSSSASTGRKDSDAAAHDDGAAPDDVPIRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYRNAYHVFVNERALGDFMASPDKYINAVHSFVVHRPELIYLLRLQESFPDTSMASLMKLLNNKTHVHPLLAPHAVLKVDASTSTPVHFVDKNIDVNYDWNEWSLRRRALKVANLRNCKTVSVQTTLSNFRKDVDSQVWLPQNNASQTGHDKGTNPTKTVTYFAGL 627          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A067BWK6_SAPPC (Cilia- and flagella-associated protein 206 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWK6_SAPPC)

HSP 1 Score: 437 bits (1124), Expect = 2.250e-141
Identity = 257/667 (38.53%), Postives = 384/667 (57.57%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHLRHPQGVT--ANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVE--LKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTER-PVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDKRGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTGM 1986
            ++ I ++V  ++ +C   GV VS+ LAAF+ RT++++ +      + LD  +   G+ +L   +VD LL  +SPSLETIKMQ  FD  Y+  +E +      ++ ++ ++ +SI  ++P   +DF+ALTTL+RQIFT L+ HA  D    R +EREVAAALESVFPRI LK+F+++  ++K  QL ELANIV GIR+FN+ IGKGG  I          +  + K+++ E+D+    CT+  +V+++ H  + Q  +  AN L  W++EL N+RQFLSY+QSL ED+ VS  K+  L     +E++ L+ LVG+R S+PK  VYP F  ++  W     E+++LL R ++ + L  F  SYT +  +  E  LK        +EE                                  E ++ D+   +         +D +  A  +     +  P+++S++STPEFMQLPLEYQG+CPWTIV+R GLLLPG P LGVI+Y N + VF ++ A+  F   P+ +I       V  PELI LLRL +SFP+T +  +++  + +      +   A  + +AST TPVH  E+ ++S Y WNEW+LRRRAL++ANLR C T S QT  S++R     QV+LP  N TQT    G+ PT+ V YF G+
Sbjct:    2 LDRIGKVVADIIARCKYEGVLVSDTLAAFICRTIVQEDSN----VFCLDGDIDAAGLAELTKRSVDMLLRKDSPSLETIKMQLDFDLCYVKHEEDVEKAAAMKEKKIANLHKSIVALQPSGTSDFEALTTLYRQIFTMLMVHADADKANDRTIEREVAAALESVFPRIGLKSFVSMSPDDKKFQLKELANIVGGIRLFNKEIGKGGAGIVLSIDTIRDNVASISKSVALEVDEVNQICTDYTEVLLHIHHYNAQSASGVAN-LKRWQEELNNKRQFLSYMQSLHEDIDVSSDKIGRLVTSFETELHTLKSLVGSRTSLPKGQVYPIFEALSKAWDELEVEHQLLLARSRSIKALMEFKDSYTRTLGQQSEWILKAKRAGMPPQEEWF--------------------------------EHSEPDNQAYLVSSASTASHKDSAATAHGDASAAVDNVPIRMSVDSTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQYHNAYHVFVNERALSDFMASPDTYISAVHAFVVHRPELIYLLRLQESFPDTSMASLMKLLNNKAHVHPLLAPHAVLKVDASTSTPVHFVEKNIDSTYDWNEWSLRRRALRVANLRNCKTTSAQTTLSNFRSDVDAQVWLPAENATQTGTDRGTNPTKTVTYFAGL 631          
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Match: A0A6G0W5D4_9STRA (Cilia- and flagella-associated protein 206 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5D4_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 4.340e-137
Identity = 261/684 (38.16%), Postives = 387/684 (56.58%), Query Frame = 1
Query:    1 MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQPLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFYQRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVGRGVEREVAAALESVFPRIS-------------------LKAFINLGNEEKFAQLDELANIVLGIRVFNQHIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSH-LRHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKISSEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFEVLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEAAKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMTERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKNRFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCITRMLQGSDK---RGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWTLRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGSKPTRHVQYFTG 1983
            M+ + ++V  +V +C   GV VS+ LAAFV RTV+ + T R    + LD  +  +G+ DL   +V  LL+ +SP+LETIKMQ  FD  Y+  +E +      +  ++ ++ RSI  ++P   +DFD LTTL+RQIFT L+ HA  +    R +EREVAAALESVFPRI                    LK+F+ +  ++K  QL ELA+IV GIR+FN+ IGKGG  I          + ++ +  SEE+++    CTE  +V+++ H  +H   V    +  W++EL N+RQFLSYLQSL ED+ VS  K+  L     +E++ L+ LVG R S+PK  VYP F  ++  W    +E+++LL R ++ + L  F  S+T +     E    ++ T +  +              D   A    S+  E+    +  T T      T  + +    + SR   +        PV++S+ESTPEFMQLPLEYQG+CPWTIV+R GLLLPG P LGVI+++N + VF ++ A+ +F  +P  +++   D  V+ PELI LLRL +SFP+T +  +++ +     R      +   A E+ +AST TPVH  E+ L+  Y WNEW+LRRRA+Q+ANLR   T S QT  S++R+    QV+LP  + TQT    G+ PT+ + YF G
Sbjct:    1 MDRMQKIVADIVARCKYEGVDVSDTLAAFVCRTVVHEDTNR----FCLDGDVDADGIADLTARSVTVLLQKDSPALETIKMQLDFDLCYVKHEEEVDKVRAVKAKKIANLHRSIALLQPNGTSDFDTLTTLYRQIFTLLMVHADAEKSNDRNIEREVAAALESVFPRIGWVFFLPRSRLSYVARALCRLKSFVTMSGDDKKLQLKELASIVGGIRLFNREIGKGGAGITLTLDTIHDHVAQVTRLASEEMEEASQVCTEYTEVLLHMHHAKH--NVPRERIDRWQEELNNKRQFLSYLQSLYEDIDVSTEKIRRLIATFDTELSALKALVGARTSLPKGQVYPAFEALSKAWDELDNEHQLLLARSRSIKALMQFKDSFTRTLSPQSEWILQAKRTGMPPQ--------------DEWFADNQQSL--EMAAPSKPPTATSSSSHGTHHDAKHQDDNESRHDDV--------PVRMSVESTPEFMQLPLEYQGYCPWTIVQRGGLLLPGDPSLGVIQFRNAYHVFVNERALDAFMANPAWYVESVHDFVVRKPELIYLLRLQESFPDTSMASLMRWTSNPAHRAHVHPLLAPHAVEKVDASTATPVHFVEKNLDVNYEWNEWSLRRRAVQIANLRNYKTVSVQTTLSNFRKDVDQQVWLPADHATQTGHDKGTNPTKTIAYFAG 654          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1484.3256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR55_ECTSI3.800e-30166.97Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A6H5JGH8_9PHAE2.420e-21860.03Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A835YXN0_9STRA1.640e-21751.43Cilia- and flagella-associated protein 206 n=1 Tax... [more]
F0Y6B2_AURAN1.150e-15542.82Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A8J2WV84_9STRA4.010e-15240.96Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A1V9Z5I6_9STRA6.450e-14840.12Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A485LQG7_9STRA2.960e-14739.34Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A1V9Z275_9STRA3.260e-14338.74Cilia- and flagella-associated protein 206 n=1 Tax... [more]
A0A067BWK6_SAPPC2.250e-14138.53Cilia- and flagella-associated protein 206 n=2 Tax... [more]
A0A6G0W5D4_9STRA4.340e-13738.16Cilia- and flagella-associated protein 206 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1484contigH-elongata_contig1484:11234..13922 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score855.5
Seed ortholog evalue1.6e-245
Seed eggNOG ortholog2880.D7FR55
Preferred nameCFAP206
GOsGO:0000226,GO:0001534,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032838,GO:0032991,GO:0035082,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.cilium movement
EggNOG OGs2CN2C@1,2QTGJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size2001
Cds size2001
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1484.3256.1prot_H-elongata_contig1484.3256.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1484 11234..13922 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929878.8034568-CDS-H-elongata_contig1484:11233..128321622929878.8034568-CDS-H-elongata_contig1484:11233..12832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 11234..12832 -
1691679192.7694411-CDS-H-elongata_contig1484:11233..128321691679192.7694411-CDS-H-elongata_contig1484:11233..12832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 11234..12832 -
1622929878.8164427-CDS-H-elongata_contig1484:13324..136271622929878.8164427-CDS-H-elongata_contig1484:13324..13627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 13325..13627 -
1691679192.7862782-CDS-H-elongata_contig1484:13324..136271691679192.7862782-CDS-H-elongata_contig1484:13324..13627Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 13325..13627 -
1622929878.827933-CDS-H-elongata_contig1484:13823..139221622929878.827933-CDS-H-elongata_contig1484:13823..13922Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 13824..13922 -
1691679192.7998595-CDS-H-elongata_contig1484:13823..139221691679192.7998595-CDS-H-elongata_contig1484:13823..13922Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1484 13824..13922 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1484.3256.1

>prot_H-elongata_contig1484.3256.1 ID=prot_H-elongata_contig1484.3256.1|Name=mRNA_H-elongata_contig1484.3256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=667bp
MEEIHELVQRVVKQCASRGVFVSEVLAAFVARTVIEKTTRRGKPPYSLDQ
PLSREGVGDLVDLTVDRLLEVNSPSLETIKMQAAFDSSYITEDEALINFY
QRRDMRLKDIQRSITNMRPKCGADFDALTTLHRQIFTFLLRHASNDPRVG
RGVEREVAAALESVFPRISLKAFINLGNEEKFAQLDELANIVLGIRVFNQ
HIGKGGVNIPNPDKDSAALLHKLEKALSEELDKTQATCTELQQVIVYSHL
RHPQGVTANMLSHWKDELTNRRQFLSYLQSLQEDVTVSDRKVTSLREKIS
SEMNDLEELVGNRASVPKEHVYPKFYEIAAQWTAFYHEYRVLLGRMKTFE
VLQTFCSSYTPSFREGVELKTGSEMTALEEEALAAEAALDETIIGDHLEA
AKTISVNGEITVGEREGTKTDDDKCMTLKEIQRDTQDLSRMAQIEVCGMT
ERPVKLSIESTPEFMQLPLEYQGFCPWTIVKRQGLLLPGKPELGVIRYKN
RFFVFAHKVAIYSFFKDPELFIKGALDRAVQSPELINLLRLHDSFPETCI
TRMLQGSDKRGKPRSSVGLSAAERREASTETPVHLTERILESGYHWNEWT
LRRRALQMANLRMCVTKSQQTDSSHYRRGNTTQVYLPRANHTQTNQSNGS
KPTRHVQYFTGMLSPV*
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mRNA from alignment at H-elongata_contig1484:11234..13922-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1484.3256.1 ID=mRNA_H-elongata_contig1484.3256.1|Name=mRNA_H-elongata_contig1484.3256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2689bp|location=Sequence derived from alignment at H-elongata_contig1484:11234..13922- (Himanthalia elongata Himel1 dioecious)
ATGGAGGAAATACACGAACTTGTGCAAAGGGTAGTGAAGCAATGTGCCTC CCGAGGAGTATTTGTGTCAGAAGTCCTGGCGGCCTTCGTCGCGAGGACGG TGGGTCGATGGCATGAAAATGAGCTTTCACGGATTAACCCTTCTGGAACT GGATTTCAAGTGTTATATTGAATTTAGGATAAAATAAACAGATCGTGTTC CATAGGGGTTAATTGTGAGTCGGAGAACGCACAACGTCCGACTCTGGATT GAACTTCGTGTACGTTGACCCGCTCCGCCTACTCATCATACGCAGGTCAT TGAGAAAACTACGCGAAGGGGAAAACCACCATATAGTTTAGATCAGCCTT TGAGCCGAGAAGGTGTGGGCGATCTAGTTGACCTGACTGTGGACAGGCTT CTTGAGGTGAACTCGCCTTCTCTAGAAACAATAAAGATGCAGGCGGCGTT CGACTCTAGCTACATCACTGAGGATGAGGCCCTTATTAACTTCTATCAGC GACGTGACATGCGCTTGAAGGATATTCAGCGATCAATTACGAATATGCGT CCCAAATGCGGTGCCGACTTCGACGCGCTAACCACGCTCCATCGTCAGGT GCGATTTGGTCTCCTATGTCTTTATACATATTCATACTAAGTACTAACCT CAGGGCCCCCCCAAGTCAAATCGTCCAGGTTAAAACCCCCGCGATATCGC CGTCACGTAATGCCCTATTATAGATTATTATTACGCGGTGTACCCGTTCG TAGCATTTGAACTCATTAAGCGATGTTATATTATGTGCTATCTGATAGTT CGCTCTTGTTTATTGATGCACAGTATCTCAGCGCGGGCTCTAGACGGTAC GACGCGAATCCATCAGTGACAGCGTCGACGACGGTCGCCATTTTGTGCGC GTCTCTTCCATGACGTGCGCTCTATATTTCTATTGCGCCCAACACTTGTT TTGCACGCTTCTGTTTTTGCATATCTACACATATACTTGTAGAGCTAAGT CAAACGAGTAAAGATTCCGCTGCTCGAAGATGGTCTAAGTTGACCTCACC TGCCGTTTTCCCGCTCTGTCTTGATTTGTAATCTACGTAGATATTTACCT TTCTTCTTCGACATGCTAGTAACGACCCTCGAGTTGGCCGAGGTGTCGAA CGGGAGGTAGCAGCTGCTCTCGAAAGCGTTTTTCCGCGCATAAGTCTTAA AGCCTTCATCAATCTTGGAAATGAGGAGAAATTCGCGCAGCTGGACGAAC TTGCAAACATTGTTTTAGGTATTAGGGTGTTTAACCAGCACATCGGTAAA GGCGGGGTCAATATCCCGAACCCTGATAAAGATTCCGCCGCGCTGCTGCA CAAACTTGAGAAGGCGCTGTCGGAAGAGCTTGATAAGACTCAAGCGACCT GTACCGAACTCCAGCAAGTCATCGTGTACAGTCACTTGCGGCACCCTCAA GGGGTAACGGCAAATATGCTCAGTCATTGGAAGGACGAGCTCACGAATAG GCGCCAATTCTTGTCCTATCTGCAGAGCTTGCAGGAGGATGTGACAGTGT CTGATCGTAAAGTAACCTCGCTCCGCGAAAAGATCTCATCAGAAATGAAT GACCTGGAAGAGCTGGTGGGAAACCGCGCATCTGTTCCGAAAGAACATGT CTATCCAAAATTCTACGAGATCGCCGCACAGTGGACGGCCTTTTATCATG AATATCGGGTCCTACTCGGACGAATGAAAACTTTTGAGGTCCTGCAGACA TTCTGCAGCTCGTATACCCCGTCATTTCGTGAGGGTGTCGAATTAAAAAC AGGCAGCGAGATGACCGCTTTAGAAGAGGAAGCTCTCGCAGCAGAAGCGG CTCTTGATGAAACAATAATAGGGGACCATTTGGAAGCAGCAAAAACAATT TCTGTGAATGGAGAAATCACAGTAGGCGAGCGCGAAGGCACGAAAACTGA CGATGATAAATGTATGACCCTGAAGGAGATTCAACGCGACACACAAGACC TATCAAGAATGGCCCAAATAGAAGTTTGTGGCATGACCGAGCGACCTGTC AAACTTTCGATAGAATCAACGCCGGAATTCATGCAGCTCCCTTTAGAGTA TCAGGGATTTTGCCCATGGACCATCGTGAAGAGGCAGGGGCTACTATTGC CTGGCAAGCCTGAGCTAGGAGTAATACGATACAAGAATCGATTCTTCGTT TTTGCGCACAAGGTGGCAATCTACAGCTTTTTCAAAGACCCTGAGTTATT TATAAAGGGAGCGCTCGACCGCGCCGTGCAGTCTCCGGAGCTCATCAATC TTTTACGCCTTCATGATTCATTCCCAGAGACCTGCATCACCCGCATGTTG CAGGGTAGTGACAAACGTGGCAAGCCTCGTTCTAGTGTTGGACTGAGCGC GGCAGAGAGACGCGAGGCGAGCACTGAAACACCGGTACACTTGACGGAGA GAATTTTAGAGTCTGGATATCATTGGAATGAGTGGACTCTTCGAAGACGA GCACTCCAGATGGCGAATCTTCGCATGTGCGTAACAAAATCGCAACAAAC GGACTCATCGCACTACAGAAGAGGAAATACTACGCAGGTTTATCTACCGC GAGCCAATCACACGCAGACCAACCAGAGTAACGGGAGCAAACCGACTCGC CATGTGCAATACTTTACCGGTATGTTATCCCCCGTTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig1484:11234..13922-

>mRNA_H-elongata_contig1484.3256.1 ID=mRNA_H-elongata_contig1484.3256.1|Name=mRNA_H-elongata_contig1484.3256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4002bp|location=Sequence derived from alignment at H-elongata_contig1484:11234..13922- (Himanthalia elongata Himel1 dioecious)
ATGGAGGAAATACACGAACTTGTGCAAAGGGTAGTGAAGCAATGTGCCTC
CCGAGGAGTATTTGTGTCAGAAGTCCTGGCGGCCTTCGTCGCGAGGACGA
TGGAGGAAATACACGAACTTGTGCAAAGGGTAGTGAAGCAATGTGCCTCC
CGAGGAGTATTTGTGTCAGAAGTCCTGGCGGCCTTCGTCGCGAGGACGGT
CATTGAGAAAACTACGCGAAGGGGAAAACCACCATATAGTTTAGATCAGC
CTTTGAGCCGAGAAGGTGTGGGCGATCTAGTTGACCTGACTGTGGACAGG
CTTCTTGAGGTGAACTCGCCTTCTCTAGAAACAATAAAGATGCAGGCGGC
GTTCGACTCTAGCTACATCACTGAGGATGAGGCCCTTATTAACTTCTATC
AGCGACGTGACATGCGCTTGAAGGATATTCAGCGATCAATTACGAATATG
CGTCCCAAATGCGGTGCCGACTTCGACGCGCTAACCACGCTCCATCGTCA
GGTCATTGAGAAAACTACGCGAAGGGGAAAACCACCATATAGTTTAGATC
AGCCTTTGAGCCGAGAAGGTGTGGGCGATCTAGTTGACCTGACTGTGGAC
AGGCTTCTTGAGGTGAACTCGCCTTCTCTAGAAACAATAAAGATGCAGGC
GGCGTTCGACTCTAGCTACATCACTGAGGATGAGGCCCTTATTAACTTCT
ATCAGCGACGTGACATGCGCTTGAAGGATATTCAGCGATCAATTACGAAT
ATGCGTCCCAAATGCGGTGCCGACTTCGACGCGCTAACCACGCTCCATCG
TCAGATATTTACCTTTCTTCTTCGACATGCTAGTAACGACCCTCGAGTTG
GCCGAGGTGTCGAACGGGAGGTAGCAGCTGCTCTCGAAAGCGTTTTTCCG
CGCATAAGTCTTAAAGCCTTCATCAATCTTGGAAATGAGGAGAAATTCGC
GCAGCTGGACGAACTTGCAAACATTGTTTTAGGTATTAGGGTGTTTAACC
AGCACATCGGTAAAGGCGGGGTCAATATCCCGAACCCTGATAAAGATTCC
GCCGCGCTGCTGCACAAACTTGAGAAGGCGCTGTCGGAAGAGCTTGATAA
GACTCAAGCGACCTGTACCGAACTCCAGCAAGTCATCGTGTACAGTCACT
TGCGGCACCCTCAAGGGGTAACGGCAAATATGCTCAGTCATTGGAAGGAC
GAGCTCACGAATAGGCGCCAATTCTTGTCCTATCTGCAGAGCTTGCAGGA
GGATGTGACAGTGTCTGATCGTAAAGTAACCTCGCTCCGCGAAAAGATCT
CATCAGAAATGAATGACCTGGAAGAGCTGGTGGGAAACCGCGCATCTGTT
CCGAAAGAACATGTCTATCCAAAATTCTACGAGATCGCCGCACAGTGGAC
GGCCTTTTATCATGAATATCGGGTCCTACTCGGACGAATGAAAACTTTTG
AGGTCCTGCAGACATTCTGCAGCTCGTATACCCCGTCATTTCGTGAGGGT
GTCGAATTAAAAACAGGCAGCGAGATGACCGCTTTAGAAGAGGAAGCTCT
CGCAGCAGAAGCGGCTCTTGATGAAACAATAATAGGGGACCATTTGGAAG
CAGCAAAAACAATTTCTGTGAATGGAGAAATCACAGTAGGCGAGCGCGAA
GGCACGAAAACTGACGATGATAAATGTATGACCCTGAAGGAGATTCAACG
CGACACACAAGACCTATCAAGAATGGCCCAAATAGAAGTTTGTGGCATGA
CCGAGCGACCTGTCAAACTTTCGATAGAATCAACGCCGGAATTCATGCAG
CTCCCTTTAGAGTATCAGGGATTTTGCCCATGGACCATCGTGAAGAGGCA
GGGGCTACTATTGCCTGGCAAGCCTGAGCTAGGAGTAATACGATACAAGA
ATCGATTCTTCGTTTTTGCGCACAAGGTGGCAATCTACAGCTTTTTCAAA
GACCCTGAGTTATTTATAAAGGGAGCGCTCGACCGCGCCGTGCAGTCTCC
GGAGCTCATCAATCTTTTACGCCTTCATGATTCATTCCCAGAGACCTGCA
TCACCCGCATGTTGCAGGGTAGTGACAAACGTGGCAAGCCTCGTTCTAGT
GTTGGACTGAGCGCGGCAGAGAGACGCGAGGCGAGCACTGAAACACCGGT
ACACTTGACGGAGAGAATTTTAGAGTCTGGATATCATTGGAATGAGTGGA
CTCTTCGAAGACGAGCACTCCAGATGGCGAATCTTCGCATGTGCGTAACA
AAATCGCAACAAACGGACTCATCGCACTACAGAAGAGGAAATACTACGCA
GGTTTATCTACCGCGAGCCAATCACACGCAGACCAACCAGAGTAACGGGA
GCAAACCGACTCGCCATGTGCAATACTTTACCGGTATGTTATCCCCCGTT
TAGATATTTACCTTTCTTCTTCGACATGCTAGTAACGACCCTCGAGTTGG
CCGAGGTGTCGAACGGGAGGTAGCAGCTGCTCTCGAAAGCGTTTTTCCGC
GCATAAGTCTTAAAGCCTTCATCAATCTTGGAAATGAGGAGAAATTCGCG
CAGCTGGACGAACTTGCAAACATTGTTTTAGGTATTAGGGTGTTTAACCA
GCACATCGGTAAAGGCGGGGTCAATATCCCGAACCCTGATAAAGATTCCG
CCGCGCTGCTGCACAAACTTGAGAAGGCGCTGTCGGAAGAGCTTGATAAG
ACTCAAGCGACCTGTACCGAACTCCAGCAAGTCATCGTGTACAGTCACTT
GCGGCACCCTCAAGGGGTAACGGCAAATATGCTCAGTCATTGGAAGGACG
AGCTCACGAATAGGCGCCAATTCTTGTCCTATCTGCAGAGCTTGCAGGAG
GATGTGACAGTGTCTGATCGTAAAGTAACCTCGCTCCGCGAAAAGATCTC
ATCAGAAATGAATGACCTGGAAGAGCTGGTGGGAAACCGCGCATCTGTTC
CGAAAGAACATGTCTATCCAAAATTCTACGAGATCGCCGCACAGTGGACG
GCCTTTTATCATGAATATCGGGTCCTACTCGGACGAATGAAAACTTTTGA
GGTCCTGCAGACATTCTGCAGCTCGTATACCCCGTCATTTCGTGAGGGTG
TCGAATTAAAAACAGGCAGCGAGATGACCGCTTTAGAAGAGGAAGCTCTC
GCAGCAGAAGCGGCTCTTGATGAAACAATAATAGGGGACCATTTGGAAGC
AGCAAAAACAATTTCTGTGAATGGAGAAATCACAGTAGGCGAGCGCGAAG
GCACGAAAACTGACGATGATAAATGTATGACCCTGAAGGAGATTCAACGC
GACACACAAGACCTATCAAGAATGGCCCAAATAGAAGTTTGTGGCATGAC
CGAGCGACCTGTCAAACTTTCGATAGAATCAACGCCGGAATTCATGCAGC
TCCCTTTAGAGTATCAGGGATTTTGCCCATGGACCATCGTGAAGAGGCAG
GGGCTACTATTGCCTGGCAAGCCTGAGCTAGGAGTAATACGATACAAGAA
TCGATTCTTCGTTTTTGCGCACAAGGTGGCAATCTACAGCTTTTTCAAAG
ACCCTGAGTTATTTATAAAGGGAGCGCTCGACCGCGCCGTGCAGTCTCCG
GAGCTCATCAATCTTTTACGCCTTCATGATTCATTCCCAGAGACCTGCAT
CACCCGCATGTTGCAGGGTAGTGACAAACGTGGCAAGCCTCGTTCTAGTG
TTGGACTGAGCGCGGCAGAGAGACGCGAGGCGAGCACTGAAACACCGGTA
CACTTGACGGAGAGAATTTTAGAGTCTGGATATCATTGGAATGAGTGGAC
TCTTCGAAGACGAGCACTCCAGATGGCGAATCTTCGCATGTGCGTAACAA
AATCGCAACAAACGGACTCATCGCACTACAGAAGAGGAAATACTACGCAG
GTTTATCTACCGCGAGCCAATCACACGCAGACCAACCAGAGTAACGGGAG
CAAACCGACTCGCCATGTGCAATACTTTACCGGTATGTTATCCCCCGTTT
AG
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