prot_H-elongata_contig14821.3248.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14821.3248.1
Unique Nameprot_H-elongata_contig14821.3248.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.390e-36
Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MGKYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            M KY+ AT VALDKG+KDS GSAGTN  SSYLDLGAGALILWYGG+LAM+ + RM+AGRLITYQLYWNMINNSWQ LLGV+S
Sbjct:  629 MAKYDTATQVALDKGVKDSFGSAGTNAMSSYLDLGAGALILWYGGSLAMEDDRRMTAGRLITYQLYWNMINNSWQALLGVIS 710          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A812WDC2_SYMMI (AbcB1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WDC2_SYMMI)

HSP 1 Score: 96.7 bits (239), Expect = 1.100e-21
Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    3 KYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            KY++   +AL KGI D+LG AG    +SYLDLGAG LILWYGG LAM  +  +S G+LIT+QLYWNMIN +++ L+ +++
Sbjct:   61 KYSSGILIALQKGIYDALGGAGMYTINSYLDLGAGVLILWYGGRLAMQEDSTLSPGKLITFQLYWNMINGAYKGLVDILT 140          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 97.1 bits (240), Expect = 1.240e-21
Identity = 42/82 (51.22%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 MGKYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            +G Y  +T VAL  G++D+ G+AG N  +SY+DL A  L+LWYGG LA+  + RM+AG+LITYQLYWNM+++S+++L+ +V+
Sbjct:  491 VGNYRDSTRVALSTGVRDAWGTAGMNTINSYMDLAANVLVLWYGGWLAIQHDGRMTAGKLITYQLYWNMMDSSYKSLIDMVT 572          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A0M0JFP4_9EUKA (Lipid a export ATP-binding permease protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFP4_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 4.290e-21
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    3 KYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            ++     +AL KG+KD++  A +N F++YLDLGAG LILWYGG++AM+ E  ++ G LITYQLYWNM+NNS Q L  V++
Sbjct:  584 RFEVTLRLALSKGVKDAIFGAFSNAFNNYLDLGAGVLILWYGGSIAMEPEGSITVGNLITYQLYWNMLNNSLQALNNVLN 663          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S2EUW4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EUW4_TRICV)

HSP 1 Score: 92.0 bits (227), Expect = 7.100e-20
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    3 KYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            KY      ALD G+KD+ G+  T+  + YLDLGAG LILW+GG L  DGE  +S G L+T+QL+WNM+NN++QNL G+++
Sbjct:  389 KYTETNKQALDCGVKDAWGNGLTSALTGYLDLGAGVLILWFGGLLVYDGE--LSVGELVTFQLFWNMMNNAYQNLQGLIT 466          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7R9TGT2_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TGT2_9VIRI)

HSP 1 Score: 91.7 bits (226), Expect = 9.180e-20
Identity = 39/80 (48.75%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    3 KYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            KY   T  A+ KG++D++G AG+   ++YLDLGA  L+LWYGG + M G+  ++AG LITYQLYWNM+ +S+++L  V++
Sbjct:  162 KYTTKTREAMQKGVRDAVGGAGSYALNNYLDLGAMVLMLWYGGVIVMSGDGSLTAGGLITYQLYWNMLQSSFKSLQNVIT 241          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S0EEJ0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EEJ0_9EUKA)

HSP 1 Score: 87.8 bits (216), Expect = 2.410e-19
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    3 KYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAM--DGEDRMSAGRLITYQLYWNMINNSWQNLLGVVSR 83
            KY+     AL KG++D++  A T  F++YLDLGAG LILWYGG++AM  +G   ++ G LI YQLYWNMIN ++Q+L  V+++
Sbjct:  160 KYDETMTKALRKGVRDAIVGAATVSFNNYLDLGAGVLILWYGGSIAMSPEGASVLTVGSLIKYQLYWNMINGAYQSLNNVLNQ 242          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S0L5H2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5H2_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 6.110e-19
Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   11 ALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQ---NLLGVVSR 83
            AL KGI+D+   A +  F++YLDLGAG LILWYGG +AM G+  ++ G LI YQLYWNMINNSWQ   NLL   +R
Sbjct:  433 ALRKGIQDAFLGAFSAAFNNYLDLGAGVLILWYGGAIAMKGDGSITVGSLIRYQLYWNMINNSWQALNNLLNSFTR 508          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S3FCF0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FCF0_9VIRI)

HSP 1 Score: 89.0 bits (219), Expect = 8.530e-19
Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 MGKYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVS 82
            +GKY   T  A+ KG++D++G A +   +SYLDLGA  L+LWYGG + + G+  ++AG LITYQLYWNM+ +S+++L  V++
Sbjct:  305 LGKYTTKTLEAMQKGVRDAVGGASSFALNSYLDLGAMVLMLWYGGHIVLSGDGTLTAGGLITYQLYWNMLQSSFKSLQNVMT 386          
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-18
Identity = 38/80 (47.50%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    4 YNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMDGEDRMSAGRLITYQLYWNMINNSWQNLLGVVSR 83
            +  A   AL  G++D+ G AG N  +SY+DL A  L+LWYGG LA+  + RM+AG+LITYQLYW M+++S++ L+ ++S+
Sbjct:  363 FEKAARAALTVGVRDAWGGAGMNTINSYMDLAANVLVLWYGGWLAIQHDGRMTAGKLITYQLYWTMMDSSYKQLIDILSQ 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14821.3248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDT3_ECTSI2.390e-3680.49ATP-binding cassette transporter, subfamily B, mem... [more]
A0A812WDC2_SYMMI1.100e-2155.00AbcB1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S1DV78_HEMAN1.240e-2151.22Hypothetical protein (Fragment) n=5 Tax=Hemiselmis... [more]
A0A0M0JFP4_9EUKA4.290e-2153.75Lipid a export ATP-binding permease protein n=1 Ta... [more]
A0A7S2EUW4_TRICV7.100e-2052.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9TGT2_9VIRI9.180e-2048.75Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]
A0A7S0EEJ0_9EUKA2.410e-1950.60Hypothetical protein (Fragment) n=2 Tax=Phaeocysti... [more]
A0A7S0L5H2_9EUKA6.110e-1959.21Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S3FCF0_9VIRI8.530e-1947.56Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A7S0U4T8_HEMAN1.170e-1847.50Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..83
e-value: 2.4E-7
score: 32.1
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 2..81
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..83
score: 9.636
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14821contigH-elongata_contig14821:463..1089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14821.3248.1mRNA_H-elongata_contig14821.3248.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14821 460..1089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14821.3248.1 ID=prot_H-elongata_contig14821.3248.1|Name=mRNA_H-elongata_contig14821.3248.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MGKYNAATNVALDKGIKDSLGSAGTNFFSSYLDLGAGALILWYGGTLAMD
GEDRMSAGRLITYQLYWNMINNSWQNLLGVVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom