prot_H-elongata_contig14809.3241.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14809.3241.1
Unique Nameprot_H-elongata_contig14809.3241.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1160
Homology
BLAST of mRNA_H-elongata_contig14809.3241.1 vs. uniprot
Match: A0A6H5KJR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR5_9PHAE)

HSP 1 Score: 601 bits (1549), Expect = 2.130e-190
Identity = 539/1353 (39.84%), Postives = 657/1353 (48.56%), Query Frame = 0
Query:    6 GNEAAPSKRKSRRSSRQVDAPVPCHYGPVACTSSA--SLVQAYLAVDPPVVGPAH------------TPRNGGSNGNGSQASSSTCSLHMSESRFDPIKLRFGGKSKPVC---SMACSADLGADGVVG------NKGAHLNFGAGVKVVATSEAMNTALHCRCVFVLLLYEAPSETAVKASSSSYPSPSYAQGETRTRQASPTVQPRG------------RQIDTAHLIALSPDDLFLALS---------------------------------------------------------------PWRGLEVFR-AEPTRVWKGQLVFVPPLGDGSNNGIS---GCRGGGSDGGGTNSGTA------FRLDLAAASST-----KEFCGATRPDEVNPRSKIQSGNGCSGTVGE----LLVCPASSSSLAAV-----CLSGSGPEVGRWGDVDGGGYVGIRAPFGAVLAVPALSSASASIDRNEKAIHPPPF---SWASLSFDRFRRASLSPWRSTLPGCS-DTLTCLCRAPAMDSGVVSLAQGSTTE--TGMPAGLVVNPPPSTVYVGVA--------NGASVRQSTGGSLMELQGGVALSCSRSLPAPPWAVMTAAVDDARGVLAVLLSDAVGTTLLLARDGCELAIVEEYRGVASAHVGDFLGNGREQVALFPMVYSAATASSGGGAASVALQRPSTPMVAKPGDVTWDQLPLKAIVKRALVTDCSCVWGNGRRDDLAALPGVGPIQVGGGVAIGAGSGDVGRSGGIVAGDSLDVIKGRKRQRTET--DHSRDA--EGREGLDYTSMR-------DG--DNRLARLSTVVGVLRRRVLVEEARLLKLRQTRRGKAAALEVAELALVARVE------GGFNRNSSGVAQGHAEAS--LLSSARTFYDGQTGLVADGAS-----SNVPSWV---EQGIGNPSCPPLRCEVALVRFHAPSRTLCFDARVFNPIQTTNGDVEKSSAV----------AVSATDVSISLACVSGRLTTRSAVCRRLCPGENATIRACAEVPPWVQAGEV------VTP-----LYASCTWCTNSCMVVPAPATDVGVAAERQE--------FHTPSRHCTVFARVLVSPQDMLGVGPLASSGVSPSSPALETRSGVEMPSALCLGSSIDDRCTGFSGGGSSNGKIPLVTLEESSKNLGMFDVGVRLDLLVRSDDSGTT----LTALPQALRSLSAAAASLPEPWAGGAAARFDGCSERAAACTLRSSDSPGAPAVLLRVAAGALPDGARASADHASEEGRALMAAATAALREEIAALEGVAKREGEENEGIGAPLLSAALERYRTAQMESDLLASRLVGRVVAARGG 1160
            GNEA PSK+K RRSSR  +AP   HYGPVA TS+A  +LVQA L VD                      R+G   GN      ++  L+MSES+FD ++ RFGG+SKPV    +   SA  GA           +KG  L+FG G K+VAT EAM+  LHCRCVFVLL   A S T   +        + A                             R +DTAHLI LSP+DLF ALS                                                               PWRGLE+FR   P   W+G  V +P +  G   G     G R GG   GG            FRLDLAAA++      ++   AT        +   +  G    VG     LLVCP  +   AA        SG G E      + G           AV+A+PA                        W SL  DR   ASL+PW          + TCL RAP MDSGVV LA G+  E       GL++   P T Y GVA           +  +  GG+L+ELQ G ALSC+R LPAPP +VM AAVDDA GVLAVLL+D  GT LLLARDGC+  +VEE+RG+++A  GDFLGNGREQVA      SAA+  +G                +K G   W+QLPLK++VKRALVTDCSCVWGN RR+DL   P   P  V G        G V  +GG          KG+KRQR+    D +  A   G  G      +       DG  D RL+RLS+VVGVLRRRV  EEARLL LRQ RRGKAAALE A+LAL A VE      GG    + G   G    S    S+A  F DG       G       S +PS     E+    P   PL+C +A VRFH PSR LC DA V NP     G+  +++             V+  +V +++A  SG L TRSAVC RL PGE+AT+RAC EVP  + AG        V P     LYASC+W         AP       + R E           PSR   +FARVLVSP+DMLG+G     G S +    + ++G ++      G     +                       K+LG+FDVG RLDLL+ S D  TT    L ALP+A+RSLS  AA LPE WAGGAA R +GCSERAA CTLR+ DSP APAVLL VAAGALPD   ASADHAS +G+AL+ AA AAL++E+AALE V +  G  + G GA  L+AAL RY   Q +SD+LA++L GRVVAARGG
Sbjct:    7 GNEADPSKKKGRRSSRHGEAPPSSHYGPVASTSAAGSALVQANLTVDTXXXXXXXXXXXXXXXXXNANDRSGPRGGN-----DNSYVLYMSESKFDSVRRRFGGRSKPVLVPNTTGASAVHGAXXXXXXXXXXXSKGFRLSFGLGAKIVATKEAMHATLHCRCVFVLLCELASSATDGSSGMGKASDANTAXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRGVDTAHLITLSPNDLFCALSVDSFPLAVSTEAVQDTSGXXXXXXXXRRAQNKISVVAACALPRAFEVVDGPVVIHRPAARHGEPWRGLEIFRPGGPVGSWRGHRVPLPAVSRGGEEGEDHDDGTRLGGMLVGGDGXXXXXXXXPPFRLDLAAANAAAARDGEDLVEATPSPLSGESAATAAARGRKRAVGTGSSTLLVCPPGAPFPAATRDASFSYSGCGDE-----SMPGESLRQCNGVRAAVVALPAXXXXXXXXXXXXXXXXXXXXXXXQWTSLFIDREGGASLAPWCGLASESRYHSPTCLSRAPDMDSGVVGLASGALPEGTAAGDGGLILKSLPPTFYAGVALNSGRGGAEATTAAEGNGGALLELQRG-ALSCARLLPAPPSSVMAAAVDDALGVLAVLLADQAGTALLLARDGCDFPVVEEHRGISAAFKGDFLGNGREQVAFL----SAASTGAGXXXXXXXXXXXXGAAASKTGGAGWEQLPLKSLVKRALVTDCSCVWGNERREDLPTTP---PGGVNGEGGAXXSRGAVALTGGAEV--PKGATKGKKRQRSNGLGDEAGVAASSGASGSSVALAKPSNSGGADGNEDGRLSRLSSVVGVLRRRVQAEEARLLHLRQARRGKAAALEAAKLALTASVESGGAWGGGCELRADGGNHGEDAGSPRASSNAWLFLDGLVAPAFGGXXXXXXVSTLPSGHHVHERVAEEPPPAPLQCAIARVRFHPPSRVLCLDAHVRNPSPPKAGNAAEATPAXXXXXXXXGPTVTVVNVCLTVASASGHLATRSAVCPRLRPGESATVRACVEVPFGLLAGXXXXXXXXVVPGKAASLYASCSWSLGGGSSPTAPGGGTRTPSVRSEAGAREGDTLDRPSRSL-MFARVLVSPKDMLGLG---GGGASLAQAPEDKQAGQDL-----FGHHRSAKAAAXXXXX--XXXXXXXXXXXXCKHLGLFDVGTRLDLLLSSSDPSTTSTTSLAALPRAVRSLSEVAA-LPEAWAGGAAVRVNGCSERAAGCTLRAGDSPSAPAVLLTVAAGALPDDTLASADHASGQGQALLVAAAAALKDEMAALEAVVRERGRLDGGGGAGRLAAALRRYGATQRKSDVLAAQLAGRVVAARGG 1327          
BLAST of mRNA_H-elongata_contig14809.3241.1 vs. uniprot
Match: D7FGV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV2_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 1.980e-152
Identity = 391/886 (44.13%), Postives = 479/886 (54.06%), Query Frame = 0
Query:  351 VPALSSASASIDRNEKAIHPPPFSWASLSFDRFRRASLSPWRSTLPGCSD-TLTCLCRAPAMDSGVVSLAQGSTTETGMPAG---LVVNPPPSTVYVGVA--------NGASVRQSTGGSLMELQGGVALSCSRSLPAPPWAVMTAAVDDARGVLAVLLSDAVGTTLLLARDGCELAIVEEYRGVASAHVGDFLGNGREQVALFPMVYSAATASSGGGAASVALQRPSTPMVAKPGDVTWDQLPLKAIVKRALVTDCSCVWGNGRRDDLAALPGVGPIQVGGGVAIGAGSGDVGRSGGIVA-GDSLDV----IKGRKRQRTE-------TDHSRDAEGRE-GLDYTSMRDG-----DNRLARLSTVVGVLRRRVLVEEARLLKLRQTRRGKAAALEVAELALVARVEG----GFNRNSSGVAQGHAEAS----LLSSARTFYDGQT--GLVADGASSNVPSWV---EQGIGNPSCPPLRCEVALVRFHAPSRTLCFDARVFNPIQTTNGDVEKSSAVA-----------------VSATDVSISLACVSGRLTTRSAVCRRLCPGENATIRACAEVPPWVQAGEV------------VTPLYASCTWCTNSCMVVPAPATDVGVAAERQEFHTPSRHCTVFARVLVSPQDMLGVGPLASSGVSPSSPALETRSGVEMPSALCLGSSIDDRCTGFSGGGSSNGKIPLVTLEESSKNLGMFDVGVRLDLLVRSDDSGTT----LTALPQALRSLSAAAASLPEPWAGGAAARFDGCSERAAACTLRSSDSPGAPAVLLRVAAGALPDGARASADHASEEGRALMAAATAALREEIAALEGVAKREGEENEGIGAPLLSAALERYRTAQMESDLLASRLVGRVVAARGG 1160
            VPA SS++A  +   +  H PP  W SL  DR   ASL+PW          + TCL R P +DSGVV LA G+  E    AG   L++   P TVY GVA           +  +  GG+L+ELQ G ALSC+R LPAPP +VM AAVDDA+GVLAVLL+D  GT LLLARDGCE  +VEE+RG+A+A  GDFLGNGREQVAL     SAA+  +G                +K G   W+QLPLK++VKRALVTD SCVWGN RR+DL   P        GGV    G G  G S G VA   S++V     KG+KRQR+           S  A G    L   S   G     D+RL+RLS+VVGVLRRRV  EEARLL+LRQ RRGKAAA+E A+LAL A  EG    G     S     H E +      S+AR F +G         G  S +PS     E+    P   PL+C +  VRFH PSR LC DA V NP      +  + +                    V+  +V +++A  SG L TRSAVC RL PGE+AT+RAC EVP  + AG                 LYASC+W             +   AA      TP           V+ +DMLG+G     GV+  + A E +   +           D   +                  +  K+LG+FDVG RLDLL+ S D  TT    L ALP+A+RSLS  AA LPE WAGGAA R +GCSERAA CTLR+ DSP APAVLL VAA ALPDG  ASADHAS +GRAL+ AA  AL++E+AA+E VA+  G  + G G   L+AAL RY  AQ +SD+LA++L GRVVAA GG
Sbjct:   23 VPAASSSAAEAEDPARPQHLPP-QWTSLFVDREGGASLAPWCGLASASRHHSPTCLSRTPDIDSGVVGLASGALPEGTAAAGDGGLILKSLPPTVYAGVALDSGRGGAEATTAAEGNGGALLELQRG-ALSCARLLPAPPSSVMAAAVDDAQGVLAVLLADQAGTALLLARDGCEFPVVEEHRGIAAAFKGDFLGNGREQVALL----SAASTGAGXXXXXXXXXXXRGAAASKTGGARWEQLPLKSLVKRALVTDSSCVWGNERREDLPTAPS-------GGVN---GEGGAGGSRGAVALTGSVEVPKGATKGKKRQRSNGLGDEAGVAASSGANGSSVALAKPSKTGGADVNKDSRLSRLSSVVGVLRRRVQAEEARLLQLRQARRGKAAAVEAAKLALTASAEGISACGGGCEVSADGGDHGEDAGPPRASSNARLFLNGLVTPAFGGGGGGSTLPSGHQVHERVAEEPPPAPLQCAITRVRFHPPSRVLCLDAHVRNPSPPKASNAAEITPAXXXXXXXXXXXXXXXXPPVTVVNVCLTVASASGHLATRSAVCPRLRPGESATVRACVEVPFGLLAGXXXXXXXXXLVPGRAASLYASCSWRLGG---------NSSPAALGGGTRTPP----------VNSEDMLGLG----GGVASLAQAPEDKQAGQ--------DFFDHHRSAXXXXXXXXXXXXXXXXXDGCKHLGLFDVGTRLDLLLSSSDPSTTSTTSLAALPRAVRSLSEVAA-LPEAWAGGAAVRVNGCSERAAGCTLRAGDSPSAPAVLLTVAACALPDGTLASADHASGQGRALLVAAAEALKDEMAAVEAVARERGRLDGGGGTERLAAALRRYGAAQRKSDVLAAQLAGRVVAACGG 860          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14809.3241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJR5_9PHAE2.130e-19039.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGV2_ECTSI1.980e-15244.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14809contigH-elongata_contig14809:623..4306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14809.3241.1mRNA_H-elongata_contig14809.3241.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14809 593..4306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14809.3241.1 ID=prot_H-elongata_contig14809.3241.1|Name=mRNA_H-elongata_contig14809.3241.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1160bp
MAFSAGNEAAPSKRKSRRSSRQVDAPVPCHYGPVACTSSASLVQAYLAVD
PPVVGPAHTPRNGGSNGNGSQASSSTCSLHMSESRFDPIKLRFGGKSKPV
CSMACSADLGADGVVGNKGAHLNFGAGVKVVATSEAMNTALHCRCVFVLL
LYEAPSETAVKASSSSYPSPSYAQGETRTRQASPTVQPRGRQIDTAHLIA
LSPDDLFLALSPWRGLEVFRAEPTRVWKGQLVFVPPLGDGSNNGISGCRG
GGSDGGGTNSGTAFRLDLAAASSTKEFCGATRPDEVNPRSKIQSGNGCSG
TVGELLVCPASSSSLAAVCLSGSGPEVGRWGDVDGGGYVGIRAPFGAVLA
VPALSSASASIDRNEKAIHPPPFSWASLSFDRFRRASLSPWRSTLPGCSD
TLTCLCRAPAMDSGVVSLAQGSTTETGMPAGLVVNPPPSTVYVGVANGAS
VRQSTGGSLMELQGGVALSCSRSLPAPPWAVMTAAVDDARGVLAVLLSDA
VGTTLLLARDGCELAIVEEYRGVASAHVGDFLGNGREQVALFPMVYSAAT
ASSGGGAASVALQRPSTPMVAKPGDVTWDQLPLKAIVKRALVTDCSCVWG
NGRRDDLAALPGVGPIQVGGGVAIGAGSGDVGRSGGIVAGDSLDVIKGRK
RQRTETDHSRDAEGREGLDYTSMRDGDNRLARLSTVVGVLRRRVLVEEAR
LLKLRQTRRGKAAALEVAELALVARVEGGFNRNSSGVAQGHAEASLLSSA
RTFYDGQTGLVADGASSNVPSWVEQGIGNPSCPPLRCEVALVRFHAPSRT
LCFDARVFNPIQTTNGDVEKSSAVAVSATDVSISLACVSGRLTTRSAVCR
RLCPGENATIRACAEVPPWVQAGEVVTPLYASCTWCTNSCMVVPAPATDV
GVAAERQEFHTPSRHCTVFARVLVSPQDMLGVGPLASSGVSPSSPALETR
SGVEMPSALCLGSSIDDRCTGFSGGGSSNGKIPLVTLEESSKNLGMFDVG
VRLDLLVRSDDSGTTLTALPQALRSLSAAAASLPEPWAGGAAARFDGCSE
RAAACTLRSSDSPGAPAVLLRVAAGALPDGARASADHASEEGRALMAAAT
AALREEIAALEGVAKREGEENEGIGAPLLSAALERYRTAQMESDLLASRL
VGRVVAARGG
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