prot_H-elongata_contig147929.3232.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147929.3232.1
Unique Nameprot_H-elongata_contig147929.3232.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 6.170e-31
Identity = 52/61 (85.25%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKE+L H+RS+FQDV+VF+S+HYGKVLVLDGVIQLTERDECSYQEM+THIPCFA GDPKKV
Sbjct:   24 VKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKV 84          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.100e-23
Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            V+++L H++S+FQDV+VF S  YGKVLVLDGVIQ+TERDE +YQEM+THIPCFAH  PK+V
Sbjct:   24 VEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRV 84          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A1I7XBE5_HETBA (PABS domain-containing protein n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7XBE5_HETBA)

HSP 1 Score: 93.2 bits (230), Expect = 3.120e-23
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKK 60
            VKEIL H++S+FQDV+VF S  YG VLVLDGVIQ TERDE SYQEM+ H+P FAH +PKK
Sbjct:   51 VKEILFHEKSKFQDVLVFKSETYGNVLVLDGVIQATERDEFSYQEMLAHLPMFAHPNPKK 110          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A0B1SQ00_OESDE (Putative spermidine synthase (Fragment) n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1SQ00_OESDE)

HSP 1 Score: 94.4 bits (233), Expect = 6.360e-23
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKEIL H++S++QDV+VF S  YG VLVLDG+IQ+TERDE SYQEM+ H+P FAH +PKKV
Sbjct:   51 VKEILFHEKSDYQDVLVFKSETYGNVLVLDGIIQVTERDEFSYQEMLAHLPMFAHPNPKKV 111          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A7S2M088_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2M088_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 6.460e-23
Identity = 43/61 (70.49%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKE+LLHK+++FQD+MVF+S  +GKVL+LDGVIQLTERDE SYQEM+TH+P FAH +P+ V
Sbjct:   55 VKEVLLHKKTKFQDLMVFDSTQWGKVLILDGVIQLTERDEMSYQEMLTHLPMFAHPNPQHV 115          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: UPI000B8C86E6 (spermidine synthase-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C86E6)

HSP 1 Score: 92.8 bits (229), Expect = 7.860e-23
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            V++IL   RSE+QDVMVF S  YGKVLVLDGVIQLTERDECSYQEMITH+P  +  +PKKV
Sbjct:   69 VEKILFQGRSEYQDVMVFQSSTYGKVLVLDGVIQLTERDECSYQEMITHLPLCSIPNPKKV 129          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A0D8Y704_DICVI (Putative spermidine synthase n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8Y704_DICVI)

HSP 1 Score: 92.8 bits (229), Expect = 1.630e-22
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKEIL H++S++QD++VF S  YG VLVLDG+IQ TERDE SYQEM+ H+P FAH +PKKV
Sbjct:   21 VKEILYHEKSDYQDILVFKSETYGNVLVLDGIIQATERDEFSYQEMLAHLPMFAHPNPKKV 81          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: UPI000711C821 (spermidine synthase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711C821)

HSP 1 Score: 94.7 bits (234), Expect = 1.710e-22
Identity = 41/61 (67.21%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKE+L H++SE+QD++VF+S  YG+VLVLDGVIQ+TE+DE +YQEMITH+P FAH +PK V
Sbjct:   18 VKEVLYHEKSEYQDILVFDSESYGRVLVLDGVIQVTEKDEFAYQEMITHLPLFAHRNPKSV 78          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A196SJ54_BLAHN (Spermine/spermidine synthase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJ54_BLAHN)

HSP 1 Score: 94.7 bits (234), Expect = 4.070e-22
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VKE+L H++SEFQD+++F+S  YG+V+VLDGVIQ+TERDE +YQEMITH+P FAH  PK V
Sbjct:   24 VKEVLYHEKSEFQDILLFDSESYGRVMVLDGVIQVTERDEFAYQEMITHLPLFAHRSPKNV 84          
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Match: A0A7R9W7J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7J2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.790e-22
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHIPCFAHGDPKKV 61
            VK+++ H RS+FQDV+VF S ++G VLVLDGVIQ+TERDE +YQEMI HIP FAH DPK+V
Sbjct:   43 VKKVIDHHRSKFQDVLVFESANHGNVLVLDGVIQVTERDEFAYQEMIAHIPLFAHPDPKRV 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147929.3232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K487_9PHAE6.170e-3185.25SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A835ZDK7_9STRA2.100e-2370.49Spermidine/spermine synthase n=1 Tax=Tribonema min... [more]
A0A1I7XBE5_HETBA3.120e-2371.67PABS domain-containing protein n=1 Tax=Heterorhabd... [more]
A0A0B1SQ00_OESDE6.360e-2368.85Putative spermidine synthase (Fragment) n=1 Tax=Oe... [more]
A0A7S2M088_9DINO6.460e-2370.49Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
UPI000B8C86E67.860e-2373.77spermidine synthase-like n=1 Tax=Carica papaya Tax... [more]
A0A0D8Y704_DICVI1.630e-2267.21Putative spermidine synthase n=1 Tax=Dictyocaulus ... [more]
UPI000711C8211.710e-2267.21spermidine synthase n=1 Tax=Blastocystis sp. subty... [more]
A0A196SJ54_BLAHN4.070e-2267.21Spermine/spermidine synthase n=1 Tax=Blastocystis ... [more]
A0A7R9W7J2_9STRA4.790e-2268.85Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035246Spermidine synthase, tetramerisation domainPFAMPF17284Spermine_synt_Ncoord: 1..37
e-value: 3.6E-16
score: 58.8
NoneNo IPR availableGENE3D3.40.50.150coord: 37..61
e-value: 2.0E-5
score: 26.4
NoneNo IPR availablePANTHERPTHR11558SPERMIDINE/SPERMINE SYNTHASEcoord: 1..61
NoneNo IPR availablePANTHERPTHR11558:SF11SPERMIDINE SYNTHASEcoord: 1..61
IPR037163Spermidine synthase, tetramerisation domain superfamilyGENE3D2.30.140.10coord: 1..36
e-value: 1.7E-17
score: 65.6
IPR030374Polyamine biosynthesis domainPROSITEPS51006PABS_2coord: 1..61
score: 30.424
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147929contigH-elongata_contig147929:325..507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147929.3232.1mRNA_H-elongata_contig147929.3232.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147929 325..507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147929.3232.1 ID=prot_H-elongata_contig147929.3232.1|Name=mRNA_H-elongata_contig147929.3232.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
VKEILLHKRSEFQDVMVFNSMHYGKVLVLDGVIQLTERDECSYQEMITHI
PCFAHGDPKKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035246Spermidine_synt_N
IPR037163Spermidine_synt_N_sf
IPR030374PABS
IPR029063SAM-dependent_MTases