prot_H-elongata_contig147910.3231.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147910.3231.1
Unique Nameprot_H-elongata_contig147910.3231.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: D7G073_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G073_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 5.680e-35
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNECVDVKEG +DT+IETNYCTGQLDE+S GIDSRA+ T IRYNKVVG KGAGVRLGGHKVGR+QYG+NC+
Sbjct:  267 GNECVDVKEGAVDTVIETNYCTGQLDEESAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGVNCK 337          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 6.780e-35
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNECVDVKEG +DT+IETNYCTGQLDEDS GIDSRA+ T IRYNKVVG KGAGVRLGGHKVGR+QYGINC+
Sbjct:  580 GNECVDVKEGAVDTVIETNYCTGQLDEDSAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCK 650          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 1.390e-17
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGIN 69
            GNECVD+KEG+   I+E N CTGQ D++SGG+DSR N  I R+N+V G+ GAGVRLGG +   +  GIN
Sbjct:  189 GNECVDIKEGSWGNIVEYNNCTGQKDKESGGMDSRGNRNIFRFNEVYGNSGAGVRLGGDE---NSDGIN 254          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A6H5K4I7_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.560e-17
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNE ++VKEG++DT+IE N    Q DE+SGGI SR + +IIRYN +  + GAGVRLGGH V   +YG N Q
Sbjct:   15 GNEGIEVKEGSVDTLIEYNEVHMQYDEESGGIGSRGDRSIIRYNHIQDTDGAGVRLGGHIVDGIEYGANNQ 85          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 84.3 bits (207), Expect = 2.100e-17
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    2 NECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGIN 69
            NECVDVKEG+ D ++E N C+ QLD +S G DSR +D   RYN+V    GAG+R+GGHK+    YG N
Sbjct:  250 NECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGEN 317          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: UPI00036CBE5E (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036CBE5E)

HSP 1 Score: 83.6 bits (205), Expect = 2.400e-17
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGI 68
            GNECVD+KEG  + ++E N C GQ D DSGG D+R +  IIRYN    +KGAGVR+GG+ V   QYG+
Sbjct:  248 GNECVDIKEGAENNLVENNICAGQQDPDSGGFDARGDYNIIRYNISYENKGAGVRIGGNLVKGKQYGV 315          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.500e-17
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNE +DVKEGT+DT+IE N    Q D+DSGGI SR + +IIRYN +  + GAGVRLGGH V   +YG N Q
Sbjct:  244 GNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQ 314          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: D7FIS5_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS5_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 7.280e-17
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNE +DVKEGT+DT+IE N    Q D+DSGGI SR + +IIRYN +  + GAGVRLGGH V   +YG N Q
Sbjct:   67 GNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNYIEDTDGAGVRLGGHTVDGIEYGKNNQ 137          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 7.350e-17
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNE +DVKEG++DT+IE N    Q D+DSGGI SR + +IIRYN +  + GAGVRLGGH V   +YG N Q
Sbjct:  249 GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDSTEYGKNNQ 319          
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.870e-16
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSKGAGVRLGGHKVGRDQYGINCQ 71
            GNE +DVKEG++DT+IE N    Q D+DSGGI SR + +IIRYN +  + GAGVRLGGH V   +YG N Q
Sbjct:  250 GNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQ 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147910.3231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G073_ECTSI5.680e-3583.10Putative nosD copper-binding protein n=1 Tax=Ectoc... [more]
A0A6H5JK02_9PHAE6.780e-3585.92Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A1F7I8U6_9BACT1.390e-1757.97Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A6H5K4I7_9PHAE1.560e-1756.34Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
Q6XM06_9PHYC2.100e-1754.41FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]
UPI00036CBE5E2.400e-1755.88right-handed parallel beta-helix repeat-containing... [more]
A0A6H5L3G3_9PHAE4.500e-1759.15Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7FIS5_ECTSI7.280e-1759.15FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JYT7_9PHAE7.350e-1757.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8H5_9PHAE1.870e-1657.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..61
e-value: 1.1E-6
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147910contigH-elongata_contig147910:287..1120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147910.3231.1mRNA_H-elongata_contig147910.3231.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147910 287..1120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147910.3231.1 ID=prot_H-elongata_contig147910.3231.1|Name=mRNA_H-elongata_contig147910.3231.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
GNECVDVKEGTMDTIIETNYCTGQLDEDSGGIDSRANDTIIRYNKVVGSK
GAGVRLGGHKVGRDQYGINCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold