mRNA_H-elongata_contig147606.3222.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: D7G7V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V0_ECTSI) HSP 1 Score: 264 bits (674), Expect = 4.920e-86 Identity = 130/170 (76.47%), Postives = 139/170 (81.76%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQPDDEDAPPEGATTDAPPNGSQL 510
F L GK LE +DL RTARSATAGL++HGPLCH+WIELMQTYLDFDGAWWNF+PKVIADQTVWS+FLNAAYSTMIMSLQG+ E VW VKS AWPALTSSWRFWPLIHC SFS IPKDLKLLFIDCMEIIWVTILSTVAN DRQ D P EG A +GS +
Sbjct: 124 FTAQLFTGKTLEDMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQAD----PAEGEMVPAMASGSAM 289
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A6H5KZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF3_9PHAE) HSP 1 Score: 264 bits (675), Expect = 1.270e-84 Identity = 130/170 (76.47%), Postives = 139/170 (81.76%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQPDDEDAPPEGATTDAPPNGSQL 510
F L GK LE +DL RTARSATAGL++HGPLCH+WIELMQTYLDFDGAWWNF+PKVIADQTVWS+FLNAAYSTMIMSLQG+ E VW VKS AWPALTSSWRFWPLIHC SFS IPKDLKLLFIDCMEIIWVTILSTVAN DRQ D P EG A +GS +
Sbjct: 244 FTAQLFTGKTLENMDLMRTARSATAGLLIHGPLCHFWIELMQTYLDFDGAWWNFIPKVIADQTVWSVFLNAAYSTMIMSLQGLPKEEVWGEVKSKAWPALTSSWRFWPLIHCCSFSNAIPKDLKLLFIDCMEIIWVTILSTVANGDRQAD----PAEGEMVPAMASGSTM 409
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A836CBY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY7_9STRA) HSP 1 Score: 219 bits (558), Expect = 6.440e-68 Identity = 101/144 (70.14%), Postives = 122/144 (84.72%), Query Frame = 1
Query: 16 VQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQG-MSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQ 444
++G+ LETIDLKRTARSA AGL VHGP+CH+WIE MQ LDF+GAWWNF+PKV+ADQTV+S+ LNAAY++ ++ L G P +W VK+T PA+TSSWRFWPLIHC+SFST IPKD KLLFID MEIIWVTILS+VANKD++
Sbjct: 200 LRGETLETIDLKRTARSAAAGLFVHGPMCHFWIEWMQANLDFNGAWWNFLPKVVADQTVYSLVLNAAYTSFVIGLSGEKKPSEIWDYVKTTCVPAITSSWRFWPLIHCLSFSTLIPKDFKLLFIDLMEIIWVTILSSVANKDQE 343
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A7S2B582_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B582_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.060e-62 Identity = 91/147 (61.90%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDR 441
F + QG+ L+T+DL R+ARS TAG V HGPLCHYW++ M+TYLDF+GAWW KV+ADQTVWSI+LNA YS +I SL +P++VW+ VK+T+WPAL +SWRFWP +HC+SFS +P DLKLL++D MEI+WVT+LS VAN D+
Sbjct: 169 FVSQVYQGRTLKTLDLARSARSGTAGFVGHGPLCHYWMQFMETYLDFNGAWWGTGVKVLADQTVWSIYLNAMYSFLIGSLALRNPKDVWQDVKATSWPALRTSWRFWPFVHCISFSHAVPLDLKLLWVDVMEIVWVTLLSKVANDDK 315
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A7S3ZXF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXF3_9STRA) HSP 1 Score: 200 bits (509), Expect = 8.650e-60 Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQ 444
F + QG+ L+T+DL R+ARS AG V HGPLCHYW+ M+TYLDFDGAW+ KV+ADQTVWS++LNA YS +I + P VWK V++T+WPAL SSWRFWP +HC+SFS +P DLKLL++D MEI+WVTILS VAN D++
Sbjct: 189 FVSQVYQGRTLKTVDLARSARSGAAGFVGHGPLCHYWMVFMETYLDFDGAWYGTGVKVLADQTVWSLYLNACYSFLIGTFALRDPREVWKDVQATSWPALRSSWRFWPFVHCISFSHLVPLDLKLLWVDVMEIVWVTILSKVANDDKE 336
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A7S0EL43_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EL43_9EUKA) HSP 1 Score: 197 bits (500), Expect = 2.570e-59 Identity = 88/150 (58.67%), Postives = 115/150 (76.67%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQPD 450
F + QG+DL+++DL R+ARS AG + HGPLCHYW+ M+ YLD+ GAWW KV+ADQTVWS++LNA YS +I +L +P+ VWK VK+T+WPAL SWRFWP +HC+SFS +P DLKLL++D MEI+WVTILS VAN+D + D
Sbjct: 132 FISQIYQGRDLKSLDLPRSARSGAAGFIGHGPLCHYWMLTMERYLDYGGAWWATGIKVLADQTVWSLYLNAMYSFLIGTLAFRNPKEVWKDVKATSWPALRVSWRFWPFVHCISFSHAVPIDLKLLWVDVMEIVWVTILSQVANQDGKED 281
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: F0Y502_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y502_AURAN) HSP 1 Score: 189 bits (481), Expect = 2.110e-58 Identity = 85/147 (57.82%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDR 441
F + QG++L+++DL R+ARS AG V HGPLCH+W+ M+ +LDFDGAW+ KV ADQTVWS++LNA YS +I S +P +VW+ VK+T+WPAL SSWRFWP +H +SFS +P DLKLL++D MEI+WVTILS VAN D+
Sbjct: 42 FVSQIYQGRNLKSVDLARSARSGAAGFVGHGPLCHFWMVWMEAHLDFDGAWYGTGFKVFADQTVWSLYLNAMYSFLIGSFALRNPRDVWEDVKATSWPALRSSWRFWPFVHTISFSHLVPLDLKLLWVDAMEIVWVTILSKVANDDK 188
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A7R9W0S2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0S2_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.890e-58 Identity = 92/147 (62.59%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDR 441
F + QGK L T+DL R RS AG +VHGPLCH+W+ M+TYLDFDGAWW KV AD TVWSIFLNAAYST+I +L G SP++V V++T WPAL S+WRFWP +H VSFS +P DLKLL++D ME+IWVTILS VAN+D+
Sbjct: 194 FISQVYQGKTLSTLDLPRPFRSGAAGFLVHGPLCHFWLLFMETYLDFDGAWWATGIKVTADLTVWSIFLNAAYSTVIGTLAGRSPKDVLTDVRATQWPALRSAWRFWPFVHTVSFSHAVPLDLKLLWVDFMEVIWVTILSKVANEDK 340
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A6T2IAT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2IAT7_9EUGL) HSP 1 Score: 200 bits (508), Expect = 6.880e-57 Identity = 92/154 (59.74%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDRQPDDEDA 462
F + QG++L+T+DL R RS TAG + HGPLCHYWI M+TYLDF GAWW KVIADQTVWS++LNA YS +I +L +P +VW+ VK+T+WPAL SSWRFWP +H +SFS +P DLKLL++D MEI+WVTILS VAN+D + + E+A
Sbjct: 578 FISQVYQGRNLKTLDLPRCIRSGTAGFIGHGPLCHYWIGFMETYLDFGGAWWGTGFKVIADQTVWSLYLNAVYSFLIGALAFRNPADVWQDVKTTSWPALRSSWRFWPFVHTISFSHSVPIDLKLLWVDTMEIVWVTILSRVANQDDKKEPENA 731
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Match: A0A7S2FKA3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKA3_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.000e-56 Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1
Query: 1 FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAWWNFVPKVIADQTVWSIFLNAAYSTMIMSLQGMSPENVWKGVKSTAWPALTSSWRFWPLIHCVSFSTFIPKDLKLLFIDCMEIIWVTILSTVANKDR 441
F + QG+ L+TIDL R+ARS TAG + HGPLCHYW+ M+ YLDF GAWW KVIADQTVWSI+LNA YS +I L P+ VW+ VK T+WPAL +SWRFWP +H +SFS + DLKLL++D MEI+WVT+LS VAN D+
Sbjct: 142 FVSQVYQGRTLDTIDLARSARSGTAGFIGHGPLCHYWMTFMENYLDFGGAWWATGIKVIADQTVWSIWLNACYSFIIGILAFRDPKVVWEDVKKTSWPALRTSWRFWPFVHVISFSHIVNLDLKLLWVDAMEIVWVTLLSKVANDDK 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147606.3222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147606.3222.1 >prot_H-elongata_contig147606.3222.1 ID=prot_H-elongata_contig147606.3222.1|Name=mRNA_H-elongata_contig147606.3222.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp FCYLLVQGKDLETIDLKRTARSATAGLVVHGPLCHYWIELMQTYLDFDGAback to top mRNA from alignment at H-elongata_contig147606:98..1395+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147606.3222.1 ID=mRNA_H-elongata_contig147606.3222.1|Name=mRNA_H-elongata_contig147606.3222.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1298bp|location=Sequence derived from alignment at H-elongata_contig147606:98..1395+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147606:98..1395+ >mRNA_H-elongata_contig147606.3222.1 ID=mRNA_H-elongata_contig147606.3222.1|Name=mRNA_H-elongata_contig147606.3222.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig147606:98..1395+ (Himanthalia elongata Himel1 dioecious)back to top |