prot_H-elongata_contig147369.3213.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147369.3213.1
Unique Nameprot_H-elongata_contig147369.3213.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A6H5JXT2_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT2_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.070e-43
Identity = 70/95 (73.68%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    2 KVLSLKNNGISACFVGGSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGI 96
            +VLSL +NGISAC VGGSSD  TE+KAI G +PLVFVTPEKV+ WDHGL+ M+ GPGLAL AVDESHCV EWGHDFRPSY EL  LR +FP V I
Sbjct:    4 QVLSLASNGISACLVGGSSDLRTEEKAIKGDYPLVFVTPEKVSGWDHGLKAMQAGPGLALIAVDESHCVAEWGHDFRPSYLELRSLRDRFPQVPI 98          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: D7G9E9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E9_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.530e-41
Identity = 70/95 (73.68%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    2 KVLSLKNNGISACFVGGSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGI 96
            +VLSL +NGISAC VGGSSD  TE+KAI G +PLVFVTPEKV+ WDHGL+ M+ GPGLAL AVDESHCV EWGHDFRPSY EL  LR KFP V +
Sbjct:   26 QVLSLASNGISACLVGGSSDLRTEEKAIKGDYPLVFVTPEKVSGWDHGLKAMQAGPGLALIAVDESHCVAEWGHDFRPSYLELRSLRDKFPQVPL 120          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A446JN67_TRITD (Helicase ATP-binding domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446JN67_TRITD)

HSP 1 Score: 96.3 bits (238), Expect = 2.940e-23
Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPS 93
            L L  +GISACF+G G  D   E KA++G + +++V PE V      L+ +   PG+ALFA+DE HCV +WGHDFRP Y +L  LR+ F S
Sbjct:    6 LKLAKHGISACFLGSGQPDNRVEGKAMAGMYKIIYVCPETVLRLMEPLKKLAEKPGIALFAIDEVHCVSKWGHDFRPDYRKLSVLRQNFCS 96          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: UPI000C1D606B (ATP-dependent DNA helicase Q-like SIM isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D606B)

HSP 1 Score: 101 bits (251), Expect = 8.060e-23
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKF 91
            L L  +GISACF+G G  D++ E KAISG + +++V PE +      L+++  G G+ALFA+DE HCV +WGHDFRP Y  LC LR  F
Sbjct:  232 LKLAKHGISACFLGSGQIDKSVEQKAISGVYNIIYVCPETILRLIKPLQSLAEGRGIALFAIDEVHCVSKWGHDFRPDYRRLCVLRENF 320          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A2G2W7X9_CAPBA (DNA helicase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W7X9_CAPBA)

HSP 1 Score: 100 bits (249), Expect = 1.410e-22
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKF 91
            L L N+G+SACF+G G +DR+ E KA+SG + +++V PE +      LR++    G+ALFA+DE HCV +WGHDFRP Y  L  LR  F
Sbjct:  224 LKLANHGVSACFLGSGQTDRSVEQKAMSGMYSIIYVCPETILRLIKPLRSLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSILRENF 312          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: UPI001FB11731 (ATP-dependent DNA helicase Q-like SIM isoform X2 n=1 Tax=Capsicum annuum TaxID=4072 RepID=UPI001FB11731)

HSP 1 Score: 100 bits (249), Expect = 1.480e-22
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKF 91
            L L N+G+SACF+G G +DR+ E KA+SG + +++V PE +      LR++    G+ALFA+DE HCV +WGHDFRP Y  L  LR  F
Sbjct:  224 LKLANHGVSACFLGSGQTDRSVEQKAMSGMYSIIYVCPETILRLIKPLRSLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSILRENF 312          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A2G2XW06_CAPAN (ATP-dependent DNA helicase n=3 Tax=Capsicum TaxID=4071 RepID=A0A2G2XW06_CAPAN)

HSP 1 Score: 100 bits (249), Expect = 1.500e-22
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKF 91
            L L N+G+SACF+G G +DR+ E KA+SG + +++V PE +      LR++    G+ALFA+DE HCV +WGHDFRP Y  L  LR  F
Sbjct:  224 LKLANHGVSACFLGSGQTDRSVEQKAMSGMYSIIYVCPETILRLIKPLRSLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSILRENF 312          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A9T1T4_PHYPA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T1T4_PHYPA)

HSP 1 Score: 100 bits (248), Expect = 2.010e-22
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGI 96
            L L   G+SACF+G G  D+  E KA++G + +V+V PE +   +  L+++ RG G+ALFAVDE+HC+ +WGHDFRP+Y +L  LR KF  VG+
Sbjct:   75 LQLARQGVSACFLGSGQVDKTIELKAMAGIYNIVYVCPETLPRLESCLQSLARGKGIALFAVDEAHCISKWGHDFRPTYRQLSMLRDKF-KVGV 167          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A2K1ITP0_PHYPA (DNA helicase n=9 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1ITP0_PHYPA)

HSP 1 Score: 100 bits (248), Expect = 2.070e-22
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGI 96
            L L   G+SACF+G G  D+  E KA++G + +V+V PE +   +  L+++ RG G+ALFAVDE+HC+ +WGHDFRP+Y +L  LR KF  VG+
Sbjct:  430 LQLARQGVSACFLGSGQVDKTIELKAMAGIYNIVYVCPETLPRLESCLQSLARGKGIALFAVDEAHCISKWGHDFRPTYRQLSMLRDKF-KVGV 522          
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Match: A0A4S8K1N6_MUSBA (ATP-dependent DNA helicase n=3 Tax=Musa TaxID=4640 RepID=A0A4S8K1N6_MUSBA)

HSP 1 Score: 99.8 bits (247), Expect = 2.790e-22
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    4 LSLKNNGISACFVG-GSSDRATEDKAISGHFPLVFVTPEKVAMWDHGLRTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGI 96
            L L  +G+SACF+G G  D   E KA+ G + +V+V PE +      LR +   PG+ALFA+DE HCV +WGHDFRP Y  LC LR  F S  +
Sbjct:  253 LKLAKHGVSACFLGSGQPDSTVEYKAMCGMYKIVYVCPETILRLIEPLRRLAVNPGIALFAIDEVHCVSKWGHDFRPDYRRLCMLRENFNSCNL 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147369.3213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXT2_9PHAE1.070e-4373.68DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G9E9_ECTSI1.530e-4173.68ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A446JN67_TRITD2.940e-2348.35Helicase ATP-binding domain-containing protein n=2... [more]
UPI000C1D606B8.060e-2350.56ATP-dependent DNA helicase Q-like SIM isoform X1 n... [more]
A0A2G2W7X9_CAPBA1.410e-2249.44DNA helicase n=1 Tax=Capsicum baccatum TaxID=33114... [more]
UPI001FB117311.480e-2249.44ATP-dependent DNA helicase Q-like SIM isoform X2 n... [more]
A0A2G2XW06_CAPAN1.500e-2249.44ATP-dependent DNA helicase n=3 Tax=Capsicum TaxID=... [more]
A9T1T4_PHYPA2.010e-2248.94ATP-dependent DNA helicase (Fragment) n=1 Tax=Phys... [more]
A0A2K1ITP0_PHYPA2.070e-2248.94DNA helicase n=9 Tax=Physcomitrium patens TaxID=32... [more]
A0A4S8K1N6_MUSBA2.790e-2247.87ATP-dependent DNA helicase n=3 Tax=Musa TaxID=4640... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..97
e-value: 1.7E-23
score: 84.9
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 3..94
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147369contigH-elongata_contig147369:182..1221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147369.3213.1mRNA_H-elongata_contig147369.3213.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147369 182..1221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147369.3213.1 ID=prot_H-elongata_contig147369.3213.1|Name=mRNA_H-elongata_contig147369.3213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MKVLSLKNNGISACFVGGSSDRATEDKAISGHFPLVFVTPEKVAMWDHGL
RTMERGPGLALFAVDESHCVVEWGHDFRPSYEELCCLRRKFPSVGIGNRG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase