prot_H-elongata_contig147306.3209.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147306.3209.1
Unique Nameprot_H-elongata_contig147306.3209.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.230e-16
Identity = 118/186 (63.44%), Postives = 128/186 (68.82%), Query Frame = 0
Query:    1 AKETARATLGQLAAKVQAEEKSRRSRATVVDGPVGDGEDSV-----------------GPAGPGXXXXXXXXXXXXXXXXXXXSSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAASAEDSEGDDDNMSDESDGEGGTLGLCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            AK+++RATLGQLAAKVQAEEKSRR+RA V DG V DG+D+                        XXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXX XX   R AA A+             D EG    LC PGTEQTGRWTK EH+LFLKALKK+GKEWKRVACMV+TR
Sbjct:   78 AKDSSRATLGQLAAKVQAEEKSRRTRAGVGDG-VRDGDDTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXGEGRGAARADXXXXXXXXXXXGEDSEG----LCLPGTEQTGRWTKAEHELFLKALKKYGKEWKRVACMVRTR 258          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A835YHT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.360e-16
Identity = 41/61 (67.21%), Postives = 45/61 (73.77%), Query Frame = 0
Query:  109 SEGDDDNMSDESDGEGGTLGLCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            S+ DDD+M       G   G+CAPGTEQTGRWTK EHDLFLKAL  +GKEWKRVA MV TR
Sbjct:    7 SDDDDDDMG------GSVQGVCAPGTEQTGRWTKGEHDLFLKALGVYGKEWKRVAAMVGTR 61          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 8.120e-16
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
Query:  118 DESDGEGGTLGLCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            +ESDGE  + GLC PGTEQTGRWTK EH+LFL+ALKK+GKEWKRVACMV+TR
Sbjct:  730 EESDGED-SEGLCLPGTEQTGRWTKAEHELFLRALKKYGKEWKRVACMVRTR 780          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A7S3HM63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM63_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.620e-8
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 0
Query:  128 GLCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            G    G E TGRWT+ EH+LFL+ALKK+GKEWK+VA MVKTR
Sbjct:    9 GTVPSGHESTGRWTRPEHELFLQALKKYGKEWKKVAGMVKTR 50          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: W7TIJ3_9STRA (SANT/Myb domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIJ3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.590e-7
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query:  129 LCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            +CAPG E TGRW++ EHD F+  LKK+GKEWKRVA  V TR
Sbjct:   53 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTR 93          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A448YY97_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY97_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.700e-7
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0
Query:  129 LCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            L   G EQTGRWTKDEH+ FL  +K +GKEWK+VA  VKTR
Sbjct:   99 LVETGQEQTGRWTKDEHEAFLIGIKMYGKEWKKVAAKVKTR 139          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A4D9CLC8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLC8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.840e-7
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0
Query:  129 LCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            +CAPG E TGRW++ EHD F+  LKK+GKEWKRVA  V TR
Sbjct:  219 VCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTR 259          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: D8LE34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE34_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.310e-7
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  128 GLCAPGTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            G+C PG E TGRWT DEH LFL+ L+  GK WK++A +++TR
Sbjct:   22 GVCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTR 63          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.180e-7
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:  133 GTEQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            G EQTGRWT++EH+ FL ALK +GKEWK+VA  VKTR
Sbjct:  116 GQEQTGRWTREEHEAFLDALKVYGKEWKKVAAKVKTR 152          
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Match: A0A836C952_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C952_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.600e-6
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
Query:  135 EQTGRWTKDEHDLFLKALKKFGKEWKRVACMVKTR 169
            E TGRWTK EHDLF+KAL  +G+EW+ +A MV TR
Sbjct:    1 EHTGRWTKAEHDLFVKALNLYGREWRTIAAMVGTR 35          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147306.3209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K5H7_9PHAE2.230e-1663.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHT8_9STRA3.360e-1667.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LG60_ECTSI8.120e-1678.85Histone deactylase of possible bacterial origin wi... [more]
A0A7S3HM63_9STRA2.620e-869.05Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7TIJ3_9STRA2.590e-765.85SANT/Myb domain protein n=1 Tax=Nannochloropsis ga... [more]
A0A448YY97_9STRA3.700e-765.85Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A4D9CLC8_9STRA4.840e-765.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
D8LE34_ECTSI6.310e-757.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S8HTR1_9STRA9.180e-770.27Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A836C952_9STRA1.600e-665.71Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 137..169
e-value: 3.9E-8
score: 33.4
NoneNo IPR availableGENE3D1.10.10.60coord: 139..169
e-value: 2.2E-8
score: 36.0
IPR017884SANT domainPROSITEPS51293SANTcoord: 135..169
score: 11.853
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 136..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147306contigH-elongata_contig147306:296..1621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147306.3209.1mRNA_H-elongata_contig147306.3209.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147306 296..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147306.3209.1 ID=prot_H-elongata_contig147306.3209.1|Name=mRNA_H-elongata_contig147306.3209.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
AKETARATLGQLAAKVQAEEKSRRSRATVVDGPVGDGEDSVGPAGPGASG
GGPGGGGGEGGGSGGGSSGGGGGSGAGGGEGGDGGGGSSGGGAADGGSGG
REAASAEDSEGDDDNMSDESDGEGGTLGLCAPGTEQTGRWTKDEHDLFLK
ALKKFGKEWKRVACMVKTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017884SANT_dom
IPR009057Homeobox-like_sf