mRNA_H-elongata_contig147192.3199.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig147192.3199.1
Unique NamemRNA_H-elongata_contig147192.3199.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 1.560e-144
Identity = 204/289 (70.59%), Postives = 241/289 (83.39%), Query Frame = 1
Query:   31 AAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEGLAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAG--------MTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTLLRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRVL 873
            AA KD ++S+FGS  CVYTGQPLDTIKVRMQARPDA+S  FQCLRRTLAEES+ SLWKGS PAL GA+ EN+VAFGVN+QLKR+FPD++G +APWW+PI FGG+TG+FT+V++CPSDVIK KVQVGRS+R        SA A A G        MT H+LRTQG RGLFVGLGAQFARDVPFYA+FFGTYET+V++GK+LPY++  + LY  AGGMAGVVGWA  MP+DS KSIIQT+ KP++LLRT+Q V +T+GW+ALF GLNAAL RAFPANAALFLGYE+VRR L
Sbjct:   13 AAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRK---GVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.970e-82
Identity = 141/280 (50.36%), Postives = 184/280 (65.71%), Query Frame = 1
Query:   43 DAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEGLAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAA--AAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQ-TSAKPDTLLRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRVL 873
            +A AS+FGS  C+YTGQPLDTIKVR+QA P+A+S   QCLR T+++E V SLWKG+ PALSGA+ ENIVAF +NK+LK L+P  +  AA   +P+A+G +TG  T+V LCP DVIKC+VQV R         GT+A  A  A  M + ++RT+G RG + GL AQ ARD  F++ FFG Y+ +V +        P +  Y+ AGG+AGV GW + MP D  KS +Q T   P +L    + +    G RALF G+    +RAFPANAALFLGYEV +R L
Sbjct:   10 EAAASIFGSFACIYTGQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAV--QPVAYGAVTGAVTAVALCPFDVIKCRVQVAR---------GTAARRAPNAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.460e-75
Identity = 140/268 (52.24%), Postives = 172/268 (64.18%), Query Frame = 1
Query:  118 MQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEGLAA----------------PWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTLLRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRVL 873
            + A  D  SSI      +  EE +R+LWKGS+PAL GA+SEN VAF VN+QLKR+  D EG                       P   GG TG+FTS  LCPSDVIKCKVQV R++      TG +A  A   M  HVL+TQG +GLFVGLGAQFARD+PFYA FFGTYE  +   K+    +P +  Y+ AGG+AGV GWA  MPID AKSIIQTS  P +L+ T+  V++T+G  AL++GL  A+ RAFPANAALFLGYE+ R +L
Sbjct:   36 VHAAKDVLSSIVG----SAIEEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK----TGETAMDAQE-MLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKAYT-TMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAREIL 293          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.830e-69
Identity = 130/294 (44.22%), Postives = 176/294 (59.86%), Query Frame = 1
Query:   22 NTSAAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFP----DEEGLAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVN---KGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTS--AKP-DTLLRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRVL 873
            N   ++KD  ASV G++ C YTGQP DT+KVR+QARPD Y+ + Q   +T   E V +LWKGS+  ++G I EN  AFGVN+QLKR+FP    D +G A   ++P   G +TG   S  LCPS+++K + Q    L   ++ T       +  + K V R QG  GL+ G+ AQ ARD  FYA FFG+YE +V    K  SLP +      +  +GG+AG++GW   MP+D  KSIIQ    A+P         +V +T+G   LF+G   AL+R+FPANAALFLGYE+ RR L
Sbjct:   11 NAKESLKDVAASVVGAVACCYTGQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQ----LEVANAKTSGLKAPTSMDILKKVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILVRAFRKHTSLPDEAN----FFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.280e-62
Identity = 118/288 (40.97%), Postives = 165/288 (57.29%), Query Frame = 1
Query:   40 KDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEGLA-----APWWKPIAFGGITGLFTSVILCPSDVIKCKVQV--GRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTLL-----RTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRR 867
            +D  ++  GS+ C YTGQPLDTIKVRMQ  P  Y+ + Q   +T+ EE V +LWKG++P   G   EN VAFGVN+ LKR FPD+             KP   G ITG  ++++L PS+VIK K QV  G SL S+              + + +++ QG R LF G  AQ  RD PFYA FFG YE      ++    +P +  +  +GG+AG+ GW + MP D  K+ +Q  A+ DT +       + K+++ +G   L++GL   L+RAFPANAALFLG E+ +R
Sbjct:   12 RDVFSATLGSVCCCYTGQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQVEIGSSLSSKD-------------ILQKMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQ--ARYDTKVFGSYFPEMIKIARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKR 284          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A1Z5JYC1_FISSO (Solute carrier family 25 (Mitochondrial ornithine transporter) member 2/15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYC1_FISSO)

HSP 1 Score: 207 bits (527), Expect = 3.730e-62
Identity = 114/294 (38.78%), Postives = 166/294 (56.46%), Query Frame = 1
Query:   19 SNTSAAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPD-----EEGLAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQV--GRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPD---TLLRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRV 870
            S   A  +D  ++  GS+ C Y GQP DT+KVRMQ  P  YS++    +    +E V + WKG++P   G  +EN +AFGVN  LKR FPD     EEG  +   KP A G ITG  ++ +L PS+++K K+QV  G+++  Q              + + +L+ QG+ G+F GL AQ ARD  FYA FFG YE      ++    +P +  Y  +GG+AG VGW + MP D  K+ +Q S       T +  + +++K +G   L++GL   L+RAFPANAALFLG E  +++
Sbjct:    5 SEPRAVARDIFSATIGSICCCYVGQPFDTVKVRMQTNPSIYSNVMASTQAIWMQEGVTAFWKGAVPTAMGMAAENAMAFGVNAALKRAFPDPVTQSEEGPPS-LLKPFAMGAITGCCSAFVLLPSEIVKAKLQVVVGKNITVQE-------------VIQSILKRQGYSGMFAGLDAQLARDSSFYAVFFGGYELFCYGFRTFVPSMPDELNYFISGGLAGCVGWTVAMPFDVPKTNVQASYDSKIVGTYVPELLRIAKQRGIGGLYSGLGPTLVRAFPANAALFLGVETGKKL 284          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.240e-61
Identity = 116/291 (39.86%), Postives = 169/291 (58.08%), Query Frame = 1
Query:   40 KDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEG---------LAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTLL------RTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRR 867
            +D  ++  GS+ C YTGQP DT+KVRMQ  P+ YSSI++    T+ EE +++ WKG++P   G  +EN +AFGVN+ LKR FPD                  +P   G ITG  ++++L PS+V+K K QV         A GT  ++    + K ++R QG++ LF GL AQ  RD PFYA FFG+YE      ++    +P +  Y  +GG+AG++GW   MP D  K+ +Q+  + DT +      + IQ ++K +G   L+ GL   L+RAFPANAALFLG E+ +R
Sbjct:   12 RDIFSATVGSIFCCYTGQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQV---------AVGTDVSSN--DIFKKMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQS--RYDTQIVGSYFPQMIQ-ITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKR 288          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.010e-60
Identity = 112/289 (38.75%), Postives = 168/289 (58.13%), Query Frame = 1
Query:   22 NTSAAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDE---EGLAAP-WWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTL---LRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRR 867
            N+    +D  ++  GS+ C YTGQP DT+KVRMQ  P A+ S+    +  ++ E + +LWKG++P   G ++EN +AFGVN+ LKR FPDE   +    P   +P   G ITG  ++ +L PS+V+K K QV           G +  A++A + K +++ QG R LF+G  AQ  RD+PFYA FFGTYE      ++    +P +  +  +GG AG++GWA  MP D  K+ +Q S     +      + ++ + +G  AL+TGL   + RAFPANAALFLG E+ ++
Sbjct:   10 NSRDVTRDIFSASIGSVACCYTGQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV---------VVGNTG-ASSADIYKKMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A1E7EQV4_9STRA (Mitochondrial carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQV4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.090e-58
Identity = 112/285 (39.30%), Postives = 154/285 (54.04%), Query Frame = 1
Query:   31 AAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPD-------EEGLAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTL---LRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYE 855
            A  +D  ++  GS+LC Y GQP DTIKV+MQ  PD +S +     + L  E V + WKG++P   G + EN +AFGVN  LKR FPD       +EG  +   KP A G ITG  ++ +L PS++IKCK Q+       SS            + K +++ QG R  FVG  AQ  RD  FYA FFG YE      ++    +P +  Y  +GG+AG+  W + MP D  K+ +Q+      +      + +V+K +G   L+ GL   LIRAFPANAALFLG E
Sbjct:   10 AVTRDLFSAAIGSVLCCYVGQPFDTIKVKMQTNPDQFSHVVGSTNQILKNEGVAAFWKGAVPTAGGMVLENCMAFGVNAALKRAFPDTNNDGDIKEGPPS-LLKPFAMGAITGCCSATVLLPSEIIKCKTQISTERHITSSQ-----------IVKQMMKKQGMRSFFVGFDAQLCRDSCFYALFFGGYELSCYTFRTFVPSMPDELNYFMSGGIAGMGAWFVAMPFDVPKTNVQSRYDTKVMGSYFPELIRVAKQRGIGGLYAGLGPTLIRAFPANAALFLGVE 282          
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.240e-57
Identity = 110/290 (37.93%), Postives = 163/290 (56.21%), Query Frame = 1
Query:   22 NTSAAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSIFQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEG---LAAP--WWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSATAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGKSLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTL---LRTIQKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRR 867
            NT    +D  ++  G++ C Y GQPLDT+KVRMQ  P  YS I       +  E   +LWKG++P   G  +EN +AFGVN+ LKR FP+++    +  P    +P   G ITG  ++++L PS+V+K K+QV         A G   T +A  + K +L+ QG + +F GL +Q ARD  FYA FFG YE      ++    +P +  +  +GG+AG+ GWA  MP D  K+ +Q+      +   L  + ++ + +G   L+ GL   LIRAFPANAALFLG E+ ++
Sbjct:    6 NTRDVSRDIFSATIGAITCAYVGQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV---------AVG---TVSARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147192.3199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ5_ECTSI1.560e-14470.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY2_9STRA1.970e-8250.36Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9CU68_9STRA1.460e-7552.24Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2S5V7_9STRA1.830e-6944.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2URT5_9STRA1.280e-6240.97Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5JYC1_FISSO3.730e-6238.78Solute carrier family 25 (Mitochondrial ornithine ... [more]
A0A7S4T4E9_9STRA3.240e-6139.86Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2L363_9STRA5.010e-6038.75Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1E7EQV4_9STRA1.090e-5839.30Mitochondrial carrier n=1 Tax=Fragilariopsis cylin... [more]
A0A7S2NZN3_9STRA2.240e-5737.93Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147192contigH-elongata_contig147192:403..1332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.5
Seed ortholog evalue1.3e-114
Seed eggNOG ortholog2880.D8LEZ5
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K15109,ko:K15397
KEGG TC2.A.29.8
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,ko04714,map00062,map01110,map04714
KEGG ModuleM00415
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015179,GO:0015181,GO:0015189,GO:0015238,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089709,GO:0098655,GO:0098656,GO:1901474,GO:1902022,GO:1902475,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0758@1,KOG0758@2759
EC2.3.1.199
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons2
Model size876
Cds size876
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929873.5638347-CDS-H-elongata_contig147192:402..8101622929873.5638347-CDS-H-elongata_contig147192:402..810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig147192 403..810 -
1691679190.7561405-CDS-H-elongata_contig147192:402..8101691679190.7561405-CDS-H-elongata_contig147192:402..810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig147192 403..810 -
1622929873.5791893-CDS-H-elongata_contig147192:864..13321622929873.5791893-CDS-H-elongata_contig147192:864..1332Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig147192 865..1332 -
1691679190.7685192-CDS-H-elongata_contig147192:864..13321691679190.7685192-CDS-H-elongata_contig147192:864..1332Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig147192 865..1332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147192.3199.1prot_H-elongata_contig147192.3199.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig147192 403..1332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig147192.3199.1

>prot_H-elongata_contig147192.3199.1 ID=prot_H-elongata_contig147192.3199.1|Name=mRNA_H-elongata_contig147192.3199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
VPQKIESNTSAAVKDAVASVFGSMLCVYTGQPLDTIKVRMQARPDAYSSI
FQCLRRTLAEESVRSLWKGSIPALSGAISENIVAFGVNKQLKRLFPDEEG
LAAPWWKPIAFGGITGLFTSVILCPSDVIKCKVQVGRSLRSQSSATGTSA
TAAAAGMTKHVLRTQGFRGLFVGLGAQFARDVPFYASFFGTYETIVNKGK
SLPYDVPLDPLYVFAGGMAGVVGWAICMPIDSAKSIIQTSAKPDTLLRTI
QKVSKTQGWRALFTGLNAALIRAFPANAALFLGYEVVRRVL*
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mRNA from alignment at H-elongata_contig147192:403..1332-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig147192.3199.1 ID=mRNA_H-elongata_contig147192.3199.1|Name=mRNA_H-elongata_contig147192.3199.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=930bp|location=Sequence derived from alignment at H-elongata_contig147192:403..1332- (Himanthalia elongata Himel1 dioecious)
GTCCCTCAGAAGATAGAGAGTAACACAAGTGCAGCGGTGAAAGATGCAGT CGCCAGCGTTTTCGGTTCCATGCTATGTGTGTACACAGGGCAGCCGCTTG ATACTATCAAGGTTCGCATGCAAGCAAGGCCAGACGCCTATAGCAGCATA TTTCAATGCCTTCGACGCACTCTAGCAGAGGAGTCCGTGAGGTCGCTGTG GAAGGGCTCTATACCTGCGCTGAGTGGCGCCATCTCAGAGAATATAGTGG CATTCGGGGTGAACAAGCAGCTCAAGCGACTGTTTCCGGACGAGGAGGGG CTTGCCGCACCGTGGTGGAAGCCTATTGCTTTTGGAGGCATCACCGGATT ATTTACCTCAGTCATCTTGTGCCCAAGCGACGTCATCAAGTGTAAGGTTC AAGTCGGTCGATCGCTGCGATCCCAATCGAGTGCGACAGGGACTTCTGCG ACCGCTGCTGCTGCTGGTGTGGGAACTGGGGCGAAGGAAACCGTCGGTCT CCCGGTGCTCAACGCGGCGCAGATGACGAAGCACGTGCTGCGCACGCAGG GATTTCGAGGCCTATTCGTCGGATTGGGGGCGCAGTTCGCGAGAGACGTG CCGTTTTACGCTTCCTTCTTCGGAACGTACGAGACGATTGTAAACAAGGG TAAGTCATTGCCGTATGATGTACCCCTCGACCCGCTGTATGTTTTCGCAG GAGGCATGGCAGGGGTGGTCGGCTGGGCCATTTGCATGCCGATAGATTCG GCCAAGTCTATCATCCAGACGTCCGCGAAGCCGGACACATTGCTGCGGAC GATCCAGAAGGTTAGCAAGACCCAGGGATGGCGAGCCCTCTTCACGGGCT TGAACGCCGCGCTTATCAGGGCGTTCCCCGCCAACGCAGCTCTCTTCCTT GGGTATGAAGTGGTGCGACGGGTGCTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig147192:403..1332-

>mRNA_H-elongata_contig147192.3199.1 ID=mRNA_H-elongata_contig147192.3199.1|Name=mRNA_H-elongata_contig147192.3199.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1752bp|location=Sequence derived from alignment at H-elongata_contig147192:403..1332- (Himanthalia elongata Himel1 dioecious)
GTCCCTCAGAAGATAGAGAGTAACACAAGTGCAGCGGTGAAAGATGCAGT
CGCCAGCGTTTTCGGTTCCATGCTATGTGTGTACACAGGGCAGCCGCTTG
ATACTATCAAGGTTCGCATGCAAGCAAGGCCAGACGCCTATAGCAGCATA
TTTCAATGCCTTCGACGCACTCTAGCAGAGGAGTCCGTGAGGTCGCTGTG
GAAGGGCTCTATACCTGCGCTGAGTGGCGCCATCTCAGAGAATATAGTGG
CATTCGGGGTGAACAAGCAGCTCAAGCGACTGTTTCCGGACGAGGAGGGG
CTTGCCGCACCGTGGTGGAAGCCTATTGCTTTTGGAGGCATCACCGGATT
ATTTACCTCAGTCATCTTGTGCCCAAGCGACGTCATCAAGTGTAAGGTTC
AAGTCGGTCGATCGCTGCGATCCCAATCGAGTGCGACAGGGACTTCTGCG
ACCGCTGCTGCTGCTGGTGTCCCTCAGAAGATAGAGAGTAACACAAGTGC
AGCGGTGAAAGATGCAGTCGCCAGCGTTTTCGGTTCCATGCTATGTGTGT
ACACAGGGCAGCCGCTTGATACTATCAAGGTTCGCATGCAAGCAAGGCCA
GACGCCTATAGCAGCATATTTCAATGCCTTCGACGCACTCTAGCAGAGGA
GTCCGTGAGGTCGCTGTGGAAGGGCTCTATACCTGCGCTGAGTGGCGCCA
TCTCAGAGAATATAGTGGCATTCGGGGTGAACAAGCAGCTCAAGCGACTG
TTTCCGGACGAGGAGGGGCTTGCCGCACCGTGGTGGAAGCCTATTGCTTT
TGGAGGCATCACCGGATTATTTACCTCAGTCATCTTGTGCCCAAGCGACG
TCATCAAGTGTAAGGTTCAAGTCGGTCGATCGCTGCGATCCCAATCGAGT
GCGACAGGGACTTCTGCGACCGCTGCTGCTGCTGGTATGACGAAGCACGT
GCTGCGCACGCAGGGATTTCGAGGCCTATTCGTCGGATTGGGGGCGCAGT
TCGCGAGAGACGTGCCGTTTTACGCTTCCTTCTTCGGAACGTACGAGACG
ATTGTAAACAAGGGTAAGTCATTGCCGTATGATGTACCCCTCGACCCGCT
GTATGTTTTCGCAGGAGGCATGGCAGGGGTGGTCGGCTGGGCCATTTGCA
TGCCGATAGATTCGGCCAAGTCTATCATCCAGACGTCCGCGAAGCCGGAC
ACATTGCTGCGGACGATCCAGAAGGTTAGCAAGACCCAGGGATGGCGAGC
CCTCTTCACGGGCTTGAACGCCGCGCTTATCAGGGCGTTCCCCGCCAACG
CAGCTCTCTTCCTTGGGTATGAAGTGGTGCGACGGGTGCTGTAAATGACG
AAGCACGTGCTGCGCACGCAGGGATTTCGAGGCCTATTCGTCGGATTGGG
GGCGCAGTTCGCGAGAGACGTGCCGTTTTACGCTTCCTTCTTCGGAACGT
ACGAGACGATTGTAAACAAGGGTAAGTCATTGCCGTATGATGTACCCCTC
GACCCGCTGTATGTTTTCGCAGGAGGCATGGCAGGGGTGGTCGGCTGGGC
CATTTGCATGCCGATAGATTCGGCCAAGTCTATCATCCAGACGTCCGCGA
AGCCGGACACATTGCTGCGGACGATCCAGAAGGTTAGCAAGACCCAGGGA
TGGCGAGCCCTCTTCACGGGCTTGAACGCCGCGCTTATCAGGGCGTTCCC
CGCCAACGCAGCTCTCTTCCTTGGGTATGAAGTGGTGCGACGGGTGCTGT
AA
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