mRNA_H-elongata_contig14719.3198.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14719.3198.1
Unique NamemRNA_H-elongata_contig14719.3198.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 3.070e-96
Identity = 188/416 (45.19%), Postives = 231/416 (55.53%), Query Frame = 1 
Query:  250 YKFEYEGWPAIGSRELLSVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLCTDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDDEEEKSITGQGXXXPKPLQQQ--------KESGVAIAGNPHQLGSPLMIAAGDGGQGGLSSVGHECGADKTDVEALVVGVAPQEPMTE-----STGGIEQWPAGQRFG-EMGHEASAAGTMLTSAKKSKXXXXXXXXRAEERKSKETRAEGGAVTASSGALLAPHPMAMMTMTMTAGEADDEGKKSKVRRLFSGKRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT 1455
            Y+F+Y+GWPAIG RELL+ GMFL+ +A +MK GRGFEV+MQALEEA+S+++P  +ELLS+VHSRLLCT RELK LK GE KYPYSWW ERL+K+L+DWY +R+VLRELI +AE+SD           XXX               K  G A+                                          G+     ++      + G  E   AG   G E   +A+ +G  +                      K+  A GG      G  L+   +     T  AG     GK SK +   + +   VP GQWYC +CR KKRVFGC+ CMQND P  ILQCDGP CGLEYH  CL+PPLD +P++KWWYCPDC   DNRVGCRVCK DVDY KLLKCDGPGC+LEWHT
Sbjct:  237 YRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDKPEENELLSLVHSRLLCTGRELKALKPGELKYPYSWWAERLQKKLSDWYRRRAVLRELIFEAERSDXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKGLGEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPKGRSVSAMDVEGAVGAAEDTEAGAAVGSEAEVKANGSGAGMRGNDDDAAGFDGR---------KQRDAGGGVEETKGGEELSSRAV---VATKAAGARGVRGKTSKSKEEPAAEISKVPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLDKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHT 640
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6H5JA25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA25_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.660e-50
Identity = 78/102 (76.47%), Postives = 85/102 (83.33%), Query Frame = 1 
Query: 1150 VPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT 1455
            VP GQWYC +CR KKRVFGC+ CMQND P  ILQCDGP CGLEYH  CL+PPL  +P++KWWYCPDC   DNRVGCRVCK DVDY KLLKCDGPGC+LEWHT
Sbjct:  157 VPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLGKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHT 258
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6H5JCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.570e-45
Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 1 
Query:  250 YKFEYEGWPAIGSRELLSVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLCTDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDDEEEKSITGQG 630
            Y+F+Y+GWPAIG RELL+ GMFL+ +A +MK GRGFEV+MQALEEA+S+++P  +ELLS+V SRLLCT RELK LK GE KYPYSWW ERL+K+LADWY +R+VLRELI +AE+SDDE +    G G
Sbjct:  236 YRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDRPEENELLSLVLSRLLCTGRELKALKPGELKYPYSWWAERLQKKLADWYRRRAVLRELIFEAERSDDEGDVLSAGAG 362
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6P7SPY1_OCTVU (RING-type E3 ubiquitin transferase n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SPY1_OCTVU)

HSP 1 Score: 70.5 bits (171), Expect = 4.110e-9
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 1 
Query: 1138 KRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            KRL  P   +     R K R   CS C   ++PE+ + CD  +C + YHLDCL+PPL+ IP+   WYCP+C+  D  V
Sbjct:  416 KRLNKPECDYCNDNPRRKCRHCACSVCGGKNNPEKQILCD--ECDMAYHLDCLKPPLEKIPDEDEWYCPECKVDDGTV 491
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001FB146F7 (PHD finger protein EHD3-like isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB146F7)

HSP 1 Score: 69.7 bits (169), Expect = 5.130e-9
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 1 
Query: 1123 RLFSGKRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVG 1374
            R  +GK+L      WYC  C        CS C+ +   ++I+ CD   C   YH+ C+EPPLD IPN KW +C  C+AG  ++G
Sbjct:  426 RCLTGKQLSTHGPCWYCPSCL-------CSICLVDKDDDKIILCDA--CDNAYHIYCMEPPLDRIPNGKW-FCRKCDAGLKKIG 499
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001E2794E8 (E3 ubiquitin-protein ligase UHRF1-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2794E8)

HSP 1 Score: 68.6 bits (166), Expect = 1.560e-8
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 1 
Query: 1141 RLGVPTGQWYCAECRA----KKR---VFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            +L VP  + Y A+C A    K+R     GC +C + D PE +L CD  +C + +H+ CL+PPL+ IP    W+CP C+  +N +
Sbjct:  276 KLPVPPLRKYSADCAACNDNKRRDCKSCGCHTCGKKDRPEELLLCD--ECNMGFHISCLDPPLEKIPEEDEWFCPGCKNDENAI 357
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001D065594 (E3 ubiquitin-protein ligase UHRF1-like isoform X1 n=3 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D065594)

HSP 1 Score: 68.2 bits (165), Expect = 2.040e-8
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 1 
Query: 1144 LGVPTGQWYCAECRA----KKRVF---GCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            L VP  + Y A+C +    +KR     GC +C + D PE +L CD  +C + +H+ CL+PPL+ IP    W+CP+C+  +N +
Sbjct:  275 LPVPPLRTYVADCTSCNDNRKRDCKRCGCHTCGKKDRPEELLLCD--ECNMGFHISCLDPPLEKIPEEDEWFCPECKNDENAI 355
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6P8YF34_THRPL (RING-type E3 ubiquitin transferase n=2 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YF34_THRPL)

HSP 1 Score: 68.2 bits (165), Expect = 2.090e-8
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 1 
Query: 1168 YCAEC----RAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            +CA C    + K +   C  C   D P+R L CD  +C + YHL CL PPL+ IP+   WYCP+C+  +N +
Sbjct:  319 FCATCQDNPKRKCKDCSCQVCGGKDEPDRQLMCD--ECDMAYHLRCLNPPLEAIPDIDEWYCPECKNDENEI 388
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI0018854CBC (E3 ubiquitin-protein ligase UHRF1-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018854CBC)

HSP 1 Score: 67.8 bits (164), Expect = 2.720e-8
Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 1 
Query: 1105 KKSKVRRLFSGKR---LGVPTGQW--YCAECRAKK----RVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            ++++V RL +G      GV T +    C  CR +     RV GC  C +   P+R + CD  +C + YH+ CL PPL+ IP    WYCP+C+   + V
Sbjct:  286 QRARVDRLAAGDSQPAAGVTTREVGPSCKICRGRPERDCRVCGCHVCHKKSDPDRQIMCD--ECDMPYHISCLTPPLEAIPEEDEWYCPECKTDTSEV 381
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BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A423SG13_PENVA (RING-type E3 ubiquitin transferase n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423SG13_PENVA)

HSP 1 Score: 67.0 bits (162), Expect = 3.790e-8
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 1 
Query: 1096 DEGKKSKVRRLFSG---KRLGVPTGQWYCAECR----AKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 1371
            DE      RR+  G   KR   P     CA C+     K +  GC  C   ++PE+ L CD  +C L YH+ CL PP++ IP+   W+CP C+  D+ +
Sbjct:  260 DERNGDMERRIIEGSPVKRKNAPN----CATCKDNPKRKCKECGCHECGGKENPEKQLMCD--ECDLPYHIYCLTPPMETIPDVDEWFCPLCKNDDSEI 352
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM2_ECTSI3.070e-9645.19Myst-related protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JA25_9PHAE1.660e-5076.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM5_9PHAE2.570e-4566.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P7SPY1_OCTVU4.110e-942.31RING-type E3 ubiquitin transferase n=2 Tax=Octopus... [more]
UPI001FB146F75.130e-939.29PHD finger protein EHD3-like isoform X1 n=2 Tax=Im... [more]
UPI001E2794E81.560e-838.10E3 ubiquitin-protein ligase UHRF1-like n=1 Tax=Har... [more]
UPI001D0655942.040e-837.35E3 ubiquitin-protein ligase UHRF1-like isoform X1 ... [more]
A0A6P8YF34_THRPL2.090e-840.28RING-type E3 ubiquitin transferase n=2 Tax=Thrips ... [more]
UPI0018854CBC2.720e-835.71E3 ubiquitin-protein ligase UHRF1-like n=2 Tax=Pol... [more]
A0A423SG13_PENVA3.790e-835.35RING-type E3 ubiquitin transferase n=1 Tax=Penaeus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14719contigH-elongata_contig14719:339..5092 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.5
Seed ortholog evalue1.3e-90
Seed eggNOG ortholog2880.D7FPM2
EggNOG free text desc.peripheral T cell tolerance induction
EggNOG OGsCOG0553@1,KOG0383@2759
Ec32 ortholog descriptionPHD-type zinc finger protein
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRING/FYVE/PHD-type zinc finger protein
Ec32 orthologEc-16_001440.1
Exons5
Model size1458
Cds size1458
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14719.3198.1prot_H-elongata_contig14719.3198.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14719 339..5092 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929873.4804204-CDS-H-elongata_contig14719:338..6471622929873.4804204-CDS-H-elongata_contig14719:338..647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 339..647 -
1691679190.6877472-CDS-H-elongata_contig14719:338..6471691679190.6877472-CDS-H-elongata_contig14719:338..647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 339..647 -
1622929873.492534-CDS-H-elongata_contig14719:1819..22771622929873.492534-CDS-H-elongata_contig14719:1819..2277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 1820..2277 -
1691679190.7099648-CDS-H-elongata_contig14719:1819..22771691679190.7099648-CDS-H-elongata_contig14719:1819..2277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 1820..2277 -
1622929873.5056193-CDS-H-elongata_contig14719:2397..25851622929873.5056193-CDS-H-elongata_contig14719:2397..2585Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 2398..2585 -
1691679190.7206626-CDS-H-elongata_contig14719:2397..25851691679190.7206626-CDS-H-elongata_contig14719:2397..2585Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 2398..2585 -
1622929873.5155325-CDS-H-elongata_contig14719:3925..40871622929873.5155325-CDS-H-elongata_contig14719:3925..4087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 3926..4087 -
1691679190.7322614-CDS-H-elongata_contig14719:3925..40871691679190.7322614-CDS-H-elongata_contig14719:3925..4087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 3926..4087 -
1622929873.5296044-CDS-H-elongata_contig14719:4751..50921622929873.5296044-CDS-H-elongata_contig14719:4751..5092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 4752..5092 -
1691679190.7415636-CDS-H-elongata_contig14719:4751..50921691679190.7415636-CDS-H-elongata_contig14719:4751..5092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14719 4752..5092 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14719.3198.1

>prot_H-elongata_contig14719.3198.1 ID=prot_H-elongata_contig14719.3198.1|Name=mRNA_H-elongata_contig14719.3198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=486bp
SSPSKNRKAPDVFKAGPSTILASLVKPTIPARSGVRATAKASSALSKHVG
GKKGGSVALAKSPAAKKPAKPATPPPPPPPPPPYKFEYEGWPAIGSRELL
SVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLC
TDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDD
EEEKSITGQGQGEPKPLQQQKESGVAIAGNPHQLGSPLMIAAGDGGQGGL
SSVGHECGADKTDVEALVVGVAPQEPMTESTGGIEQWPAGQRFGEMGHEA
SAAGTMLTSAKKSKSSKKSKKARAEERKSKETRAEGGAVTASSGALLAPH
PMAMMTMTMTAGEADDEGKKSKVRRLFSGKRLGVPTGQWYCAECRAKKRV
FGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDC
EAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT*
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mRNA from alignment at H-elongata_contig14719:339..5092-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14719.3198.1 ID=mRNA_H-elongata_contig14719.3198.1|Name=mRNA_H-elongata_contig14719.3198.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4754bp|location=Sequence derived from alignment at H-elongata_contig14719:339..5092- (Himanthalia elongata Himel1 dioecious)
TCTTCCCCATCGAAAAACAGGAAAGCCCCCGATGTATTCAAAGCCGGCCC
ATCCACCATACTGGCTTCGCTCGTGAAGCCCACAATTCCTGCCCGTAGTG
GAGTTAGAGCTACCGCCAAGGCCTCTTCTGCCTTATCAAAACACGTCGGT
GGTAAGAAGGGTGGTTCGGTGGCCCTGGCGAAGTCGCCGGCGGCGAAGAA
ACCAGCCAAGCCCGCAACACCCCCGCCCCCTCCACCGCCCCCGCCTCCGT
ACAAATTTGAGTACGAGGGGTGGCCGGCGATCGGCAGCAGGGAGCTTCTC
TCGGTGGGGATGTTCCTTCACTCCGCGGCGCAAGTGATGAAGTGAGTGTA
TAACGAGGTCGATTCATTATTATTAATATAACTGAAGTGTTGTAATCTAG
ACTATTAATGTTAATATTAATCGAGTATTCTGCGATCTTTTGAGCGTTGT
GTCGAGAACGAAGGAAGTCGTGTGCTTTCTGTTAGAGCACAAGATACCCA
AAGAGTTAATTTTACCGTTGCTGTGTTTATCGATGGTGTTGTTGGTCGCA
CTAGAGCTTTATGGTAGGTGTCATGTTATGCCATGTCACACAAAATGAAG
CTCCCACCGGCAGCCTCCCTACCGTCTTAGCCATAGGCGAGAAGTATAAG
TGGTCAGAATCCTCGCTGTGCATTGTGCTTTTAAGCTGTGCAATGAATCG
GCAGAATCTCAGACCAATCGGCGCAAGTAGTCCCCCCTTCGCGTATAACT
CTCTCGGTCACGAACTTGCCAGATCACTTTTGCCGCCCCGTCTGTGTTCA
GTCGTTCCCTGTCCAGGTTTTCTGCTAGAGGTTGCTGTGTGTTGTTGTTG
TTGTTTTTTTGTTATCAAAGCTCCTTCAGTCCCCTTCCAGGTCCACACGC
CACGTCATCTTGATTTCGTTTTGATTTTGTTTTGTTTTAATTTGATTTGA
TTTGATTTGATTTGCCTGCGCGTTTGTCTTTGTGTGTGTGTTTTCCCTTT
TAAAGGCTTGGCCGCGGCTTCGAGGTGAGAATGCAGGCTCTGGAGGAGGC
CGTCTCTACAGAGCAGCCGCGAAACAGCGAGCTTTTGTCCATGGTGCATT
CCCGCCTGCTCTGCACGGACCGGGAGCTGAAGGGCCTCAAGTCCGGAGAG
AACAAGTACCCTTACAGGTGAACATCCACAGTTGCCAGTCTGAGTCAATC
ACAGCCAGAGCCACATATATCTAGATAAGAATATGTAATGGTAATGATAA
TGGTAGCGACATCTTTTGATAGTGGCACCAAGGGCTGCAATCACGACTCT
CGCTCCATCGCCCCCCCCGGATGTTTAGCTCTTTCTTATAATATATTATT
ATTAGTATTATCGTAAACTACAACAACACAATCAGTTGGTAGAGCAGACT
ATATGTTGTGTTTGCGCCGTCTTCGAGTTTTGGATCTGATAAGAATTCAT
CCGTTGGTTGAGGAGTTCCAATAAAATGCTGAACCTAACTTTGCGATAGA
AAACCCCCGAAAACCCCCCGTCGAGGTGAGCCGAAAAGTTATGTGTAAGA
TTCCTTAGGACTACAGATGGGATAAGGGGGGGAGGGAAGTGGAAGCGTTG
TGGTTGTGGTTGGTGGGAGGGGGGGTGACAAAAAAATAATACAGTAGTTA
TCGTTGAACGTATCCACTTGAAGACGAAAGAGATACCTTCATCTTTTTAA
AACTCAGCAGTACGTAGCGGTAGATGAACAAGAATGGTTCCAGCTGCATT
GTGACGATGAACAGAGGTTTGACTCAAGGAACCTAGGAACGGTGATGGTA
GCGTCGACGAATTTGGCGATGAATGGATATTTCTTGTTTCTGTCTCGCGA
GGAGGCACCCACCCCGCCCCTCCTCGCCGGGTCGAGGGCTCGTTCTCGAG
GCTCGCGGCGTCCAGCGCCCAGCGTCTCGGTAGATAAACACTGAAGTACG
TACTTGTATGTGGAGCATATTGGCCTTCCGCTGCGCTGCACAGTACAGAA
AGAAAAAAAATCTTGAAGAGGCAAACGGGACGTGCAACGTGCTTGCGCGG
ATTCTGCGGAGCGTACAACGTGCAAGTCAACCCGACTGGACGAGGAAGTC
AGCGCTGATTGTTAATGGCGATGGTGTCAATGGCAGTGACAGTGGCTGCA
ACCTACTCGTATCAAAAGCTTTGAAGGAAGTCGTGGGAGTTTGATTGACT
CTGCCCCTCGCCATCCCCATCCCCACCGCAGGTAGAATTGGTGTAGAATT
GGTGTAGAATTGGTGTAGAATTGGTGTAGAATTGGTGTAGAATTGGTGTA
GAATTGGTGTAGAATTTCCTCATTTGGTCTCGTGTGTTGAGCTTTTCGGT
TGACCCTTTCGGAACAAGGTGTCCAGGGCACCAGTTAGTTTTTGAAGATT
TGATCTCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTTCGCTATT
GCCAACCTTTACCTTGGGTTTGCCACCCACGCGTTTTCTTTTGGGGGGTG
TACACAGTTGGTGGACGGAGAGGCTCAAGAAGCGACTGGCAGATTGGTAC
TGCAAACGCTCGGTGCTACGGGAGCTGATCCACGACGCGGAGAAGTCCGA
CGACGAAGAGGAGAAAAGCATCACTGGGCAAGGGCAAGGAGAACCCAAAC
CGTTGCAGCAGCAGAAGGAGAGCGGGGTCGCGATCGCCGGAAACCGTGGC
GAGAAAAGCGCGGCAGCGACGAGGGCAGTAGATACAACAACGATCGACAA
CGCCTCCTTTGAGCAAATGCCGATGCCCCCGCCACATCCACACTCGGCCG
AGAAAGAAGGAGGAGCCCATCAGCTCGGAAGCCCCCTCATGATTGCTGCG
GGCGACGGCGGACAGGGCGGGTTATCGTCGGTGGGGCACGAGTGCGGCGC
TGACAAGACGGATGTGGAGGCGTTGGTTGTCGGAGTCGCGCCCCAGGAGC
CTATGACGGAATCGACGGGTGGCATCGAGCAGTGGCCGGCCGGCCAGAGA
TTTGGCGAGATGGGGCACGAGGCGAGCGCGGCTGGGACGATGCTGACGTC
GGCAAAGAAGTCAAAGTCGTCAAAAAAGTCAAAAAAGGCAAGAGCTGAAG
AGAGAAAGTCGAAAGAGACAAGGGCCGAAGGTGGGGCGGTGACGGCATCG
TCGGGGGCACTGCTGGCGCCTCATCCGATGGCGATGATGACGATGACGAT
GACTGCAGGGGAAGCCGATGATGAGGGTAAGAAATCGAAGGTGAGGAGGC
TCTTCAGTGGCAAGAGATTGGGTGTGACTTGGGGTAGAGGCGGAGAAGGG
GAAGGTTGTTTCTAAGGGCAGACGGAAAGCGTAGCGCGCGATTCGAGCAT
ATCCTTCCACTCTCGAGTTCCTGCGCCACTTGGGTAAGTTGTGGGTTCCT
TCCCCGCCCTTGCGGTCTGTGGAATTAAATCTTCCGGCTAAGGTTCATTG
ACAGCAAGCAATCTCTCGGGAGATTCTTGCTGCCTGTTGATGGAACTCTT
TTTCTGATTGCATGACGGAAACCGTTACACCGTGGCCGCCGTTGCCGTGT
TGGAGAGAGAACATCGTCGTGGATAGAGCGCCTATACGTGCAAGCTCGTG
TTCATTCAGGGGAGAGAAAGAGGAAATAAGAGTGCCGTATCTGGCTCTCT
ATTTTAGCATAATGGTGATACGGTCATACGGGTTTATGTTTATATATATA
TATATATTTACACATCATCTATATATTGATGCCTTGAAAATACGGAGATG
TCTGTGTTGACCCTCTCTACTCGTTGAAGAGGTTGTCTAAAAGAGAATGT
AGTTGTTTTGTCTGCCCTGTGTTTCCGTGAAAACATTCATATACCAGGCG
CTCCTTTATGATGATGAAACATTGCCGTCGCCGTCTCTGCTGCTGCTGCT
GCTTCTGCTGCTTCTGCTGCTCTGGTCGAACCTCTTACGTCGGCGGATAC
CAACTGTCGGGGGTTGGGGGGGGGGCAAAACAAAACAATGTAGCGCGTGT
CCGTGACGCATTGCAAGGTGTGCAACACCCGGGGGACGGTTACGGACATG
GTGAAGTGCGTCTACGAGGGCTGCGGGCACAAGTACCACCTCGAATGCCT
CTCCCCGTCGCTCATTGAGGTAATTGCCTCTCGTGGGTGCTTATTTTCTG
CTGTCTGGTATCTACTGCCTCCGGAGTGATCGATGAGTGTCAACAAATAC
TAATTTATTGCGAAAACCTTGCCTGCGCGCGCGTCTTCTTTTTATTATTT
TATGACTGCAGCCATCGGGTCCATCGGGTCTTTCTCACTTAATGCCAAAA
TCTGTTTTCTACAGGCGGCAGCCCGCCCGCGCACATGTCTGCCGCTCGCA
AGCAAATGCTTCGACGGACGTATGTAGACACAATCCTTTTCACCAAGACA
AAACCTCATCGTCGCCCCCTCCCCCACTCCAAACACGCACATCAGGTGCC
CACGGGCCAGTGGTACTGCGCGGAGTGCAGAGCTAAGAAGCGCGTGTTCG
GGTGCAGCAGTTGCATGCAAAACGATCACCCAGAGAGGATCCTGCAGTGC
GACGGGCCCAAGTGCGGCCTCGAATACCACTTAGACTGCCTTGAGCCGCC
GCTTGACTGTATCCCAAACGCGAAGTGGTGGTATTGCCCAGATTGCGAGG
CGGGGGACAACCGCGTGGGGTGCCGAGTCTGTAAGGATGACGTCGACTAC
AGCAAGCTGCTCAAGTGCGACGGACCCGGTTGTGATCTGGAGTGGCACAC
GTGA
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Coding sequence (CDS) from alignment at H-elongata_contig14719:339..5092-

>mRNA_H-elongata_contig14719.3198.1 ID=mRNA_H-elongata_contig14719.3198.1|Name=mRNA_H-elongata_contig14719.3198.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2916bp|location=Sequence derived from alignment at H-elongata_contig14719:339..5092- (Himanthalia elongata Himel1 dioecious)
TCTTCCCCATCGAAAAACAGGAAAGCCCCCGATGTATTCAAAGCCGGCCC
ATCCACCATACTGGCTTCGCTCGTGAAGCCCACAATTCCTGCCCGTAGTG
GAGTTAGAGCTACCGCCAAGGCCTCTTCTGCCTTATCAAAACACGTCGGT
GGTAAGAAGGGTGGTTCGGTGGCCCTGGCGAAGTCGCCGGCGGCGAAGAA
ACCAGCCAAGCCCGCAACACCCCCGCCCCCTCCACCGCCCCCGCCTCCGT
ACAAATTTGAGTACGAGGGGTGGCCGGCGATCGGCAGCAGGGAGCTTCTC
TCGGTGGGGATGTTCCTTCACTCCGCGGCGCAAGTGATGAATCTTCCCCA
TCGAAAAACAGGAAAGCCCCCGATGTATTCAAAGCCGGCCCATCCACCAT
ACTGGCTTCGCTCGTGAAGCCCACAATTCCTGCCCGTAGTGGAGTTAGAG
CTACCGCCAAGGCCTCTTCTGCCTTATCAAAACACGTCGGTGGTAAGAAG
GGTGGTTCGGTGGCCCTGGCGAAGTCGCCGGCGGCGAAGAAACCAGCCAA
GCCCGCAACACCCCCGCCCCCTCCACCGCCCCCGCCTCCGTACAAATTTG
AGTACGAGGGGTGGCCGGCGATCGGCAGCAGGGAGCTTCTCTCGGTGGGG
ATGTTCCTTCACTCCGCGGCGCAAGTGATGAAGCTTGGCCGCGGCTTCGA
GGTGAGAATGCAGGCTCTGGAGGAGGCCGTCTCTACAGAGCAGCCGCGAA
ACAGCGAGCTTTTGTCCATGGTGCATTCCCGCCTGCTCTGCACGGACCGG
GAGCTGAAGGGCCTCAAGTCCGGAGAGAACAAGTACCCTTACAGGCTTGG
CCGCGGCTTCGAGGTGAGAATGCAGGCTCTGGAGGAGGCCGTCTCTACAG
AGCAGCCGCGAAACAGCGAGCTTTTGTCCATGGTGCATTCCCGCCTGCTC
TGCACGGACCGGGAGCTGAAGGGCCTCAAGTCCGGAGAGAACAAGTACCC
TTACAGTTGGTGGACGGAGAGGCTCAAGAAGCGACTGGCAGATTGGTACT
GCAAACGCTCGGTGCTACGGGAGCTGATCCACGACGCGGAGAAGTCCGAC
GACGAAGAGGAGAAAAGCATCACTGGGCAAGGGCAAGGAGAACCCAAACC
GTTGCAGCAGCAGAAGGAGAGCGGGGTCGCGATCGCCGGAAACCTTGGTG
GACGGAGAGGCTCAAGAAGCGACTGGCAGATTGGTACTGCAAACGCTCGG
TGCTACGGGAGCTGATCCACGACGCGGAGAAGTCCGACGACGAAGAGGAG
AAAAGCATCACTGGGCAAGGGCAAGGAGAACCCAAACCGTTGCAGCAGCA
GAAGGAGAGCGGGGTCGCGATCGCCGGAAACCCCCATCAGCTCGGAAGCC
CCCTCATGATTGCTGCGGGCGACGGCGGACAGGGCGGGTTATCGTCGGTG
GGGCACGAGTGCGGCGCTGACAAGACGGATGTGGAGGCGTTGGTTGTCGG
AGTCGCGCCCCAGGAGCCTATGACGGAATCGACGGGTGGCATCGAGCAGT
GGCCGGCCGGCCAGAGATTTGGCGAGATGGGGCACGAGGCGAGCGCGGCT
GGGACGATGCTGACGTCGGCAAAGAAGTCAAAGTCGTCAAAAAAGTCAAA
AAAGGCAAGAGCTGAAGAGAGAAAGTCGAAAGAGACAAGGGCCGAAGGTG
GGGCGGTGACGGCATCGTCGGGGGCACTGCTGGCGCCTCATCCGATGGCG
ATGATGACGATGACGATGACTGCAGGGGAAGCCGATGATGAGGGTAAGAA
ATCGAAGGTGAGGAGGCTCTTCAGTGGCAAGAGATTGGGTCCCATCAGCT
CGGAAGCCCCCTCATGATTGCTGCGGGCGACGGCGGACAGGGCGGGTTAT
CGTCGGTGGGGCACGAGTGCGGCGCTGACAAGACGGATGTGGAGGCGTTG
GTTGTCGGAGTCGCGCCCCAGGAGCCTATGACGGAATCGACGGGTGGCAT
CGAGCAGTGGCCGGCCGGCCAGAGATTTGGCGAGATGGGGCACGAGGCGA
GCGCGGCTGGGACGATGCTGACGTCGGCAAAGAAGTCAAAGTCGTCAAAA
AAGTCAAAAAAGGCAAGAGCTGAAGAGAGAAAGTCGAAAGAGACAAGGGC
CGAAGGTGGGGCGGTGACGGCATCGTCGGGGGCACTGCTGGCGCCTCATC
CGATGGCGATGATGACGATGACGATGACTGCAGGGGAAGCCGATGATGAG
GGTAAGAAATCGAAGGTGAGGAGGCTCTTCAGTGGCAAGAGATTGGGTGT
GCCCACGGGCCAGTGGTACTGCGCGGAGTGCAGAGCTAAGAAGCGCGTGT
TCGGGTGCAGCAGTTGCATGCAAAACGATCACCCAGAGAGGATCCTGCAG
TGCGACGGGCCCAAGTGCGGCCTCGAATACCACTTAGACTGCCTTGAGCC
GCCGCTTGACTGTATCCCAAACGCGAAGTGGTGGTATTGCCCAGATTGCG
AGGCGGGGGACAACCGCGTGGGGTGCCGAGTCTGTAAGGATGACGTCGAC
TACAGCAAGCTGCTCAAGTGCGACGGACCCGGTTGTGATCTGGAGTGGCA
CACGTGAGTGCCCACGGGCCAGTGGTACTGCGCGGAGTGCAGAGCTAAGA
AGCGCGTGTTCGGGTGCAGCAGTTGCATGCAAAACGATCACCCAGAGAGG
ATCCTGCAGTGCGACGGGCCCAAGTGCGGCCTCGAATACCACTTAGACTG
CCTTGAGCCGCCGCTTGACTGTATCCCAAACGCGAAGTGGTGGTATTGCC
CAGATTGCGAGGCGGGGGACAACCGCGTGGGGTGCCGAGTCTGTAAGGAT
GACGTCGACTACAGCAAGCTGCTCAAGTGCGACGGACCCGGTTGTGATCT
GGAGTGGCACACGTGA
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