mRNA_H-elongata_contig147075.3192.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 203 bits (516), Expect = 1.420e-56 Identity = 147/454 (32.38%), Postives = 225/454 (49.56%), Query Frame = 1
Query: 1 GVWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLRFQANPCVFRRILHGAVV----------------------VVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFG------VTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVI-----QIGIRRAG*DGKRVAFPTTGQGV-------HDPPIDVA--IKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G W V+RQ V+ T+ VF +K + G I ++K RLVA GF Q+ G+ + E+ + +IR LS+ A G+ QLDVD A+L D+ E++Y+E E + +V +L +A+YGL+ QA F+ I HGA++ I +YVDD++V T+ ++ + + + IK++G + LG I DR L +Q Y++T+ ERF VT LSK+D P+ + EM + PYR ++G L A TRP+I+FA L++F +NPGP HW AA + L+YL TRD GI+YGG+ + + G DD LV+ NGG ++ Q + + + + +A GQ V HD I++ I++ EDN+GAI +A N RT+H+DI
Sbjct: 24 GTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLK-QAGNAWFKTI-HGALIDLGFKPCGSDTCIYVGRAGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVF-----------CDADWGTSVDDRRSVSGLVIMM---NGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDI 461
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 196 bits (499), Expect = 2.590e-53 Identity = 142/433 (32.79%), Postives = 221/433 (51.04%), Query Frame = 1
Query: 1 GVWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQ-VGQLKEAMYGLRFQANPCVFRRIL------HGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTK-----TSIMPK-VLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDP---------PIDVAIKINEDNEGAIKMAKNRFTSRRTRHVD 1233
G W +VE G+ +G++ V++ K DG I+++K RLVA+GF Q G Y E+ T Q +R VL++ A R +D+ A++ D+D EIY+ E +R + V +L +++YGL+ QA P ++ L + V V++ V+VDD+ + S ++ ++ V L ++D+G SY LG ITR+R L Q QYI E FG+T T + P +LSKS SPQT EVEEM +IPY VG+L+ AT+TRP+I++ A LA+FN NPG HW+A + L+YL T D+ + YG +P + L + + L R G+ L L S + +Q + + + + +A G+ + K+ DN+ IK+AKN R +H+D
Sbjct: 134 GTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLK-QA-PRLWDEKLGIYIYQNDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKLEYGPDPTTNDLFVTYC--------DSDLGGNRDNGKSTTGYILKLGSGAVSWSSKLQPMVTLSSTEAEYIAAVAAGKEIKAMRNLLEELGYQSQQPAKLLIDNQSTIKVAKNPEHHGRMKHLD 556
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 197 bits (500), Expect = 9.740e-52 Identity = 136/429 (31.70%), Postives = 212/429 (49.42%), Query Frame = 1
Query: 31 GKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRL-----RHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPID-VAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G+ + ++ F K K+G+I +K RLVA+GF Q+ + Y S P+ A+I+ +L++ G DV AY +DEE++++L D ++ + + A+YGL+ +A+PCVFR+++ VV++IV+YVDD+LV + + D E+ + L P K++GE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P P+ E EE + P RE +G++M +T +RP++SFA +A+ P HW A QK L YL TRDLGITY G + + R + G A+ G G + +V S+ + AG K F P +IK+ EDN+GAI + +N +S RT+H+D+
Sbjct: 778 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSS-------TEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDV 1196
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.060e-51 Identity = 136/429 (31.70%), Postives = 212/429 (49.42%), Query Frame = 1
Query: 31 GKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRL-----RHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPID-VAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G+ + ++ F K K+G+I +K RLVA+GF Q+ + Y S P+ A+I+ +L++ G DV AY +DEE++++L D ++ + + A+YGL+ +A+PCVFR+++ VV++IV+YVDD+LV + + D E+ + L P K++GE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P P+ E EE + P RE +G++M +T +RP++SFA +A+ P HW A QK L YL TRDLGITY G + + R + G A+ G G + +V S+ + AG K F P +IK+ EDN+GAI + +N +S RT+H+D+
Sbjct: 1157 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSS-------TEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDV 1575
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.080e-51 Identity = 136/429 (31.70%), Postives = 212/429 (49.42%), Query Frame = 1
Query: 31 GKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRL-----RHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPID-VAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G+ + ++ F K K+G+I +K RLVA+GF Q+ + Y S P+ A+I+ +L++ G DV AY +DEE++++L D ++ + + A+YGL+ +A+PCVFR+++ VV++IV+YVDD+LV + + D E+ + L P K++GE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P P+ E EE + P RE +G++M +T +RP++SFA +A+ P HW A QK L YL TRDLGITY G + + R + G A+ G G + +V S+ + AG K F P +IK+ EDN+GAI + +N +S RT+H+D+
Sbjct: 1177 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSS-------TEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDV 1595
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.090e-51 Identity = 136/429 (31.70%), Postives = 212/429 (49.42%), Query Frame = 1
Query: 31 GKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLR---------------------FQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGGDQLICMHRRRL-----RHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPID-VAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G+ + ++ F K K+G+I +K RLVA+GF Q+ + Y S P+ A+I+ +L++ G DV AY +DEE++++L D ++ + + A+YGL+ +A+PCVFR+++ VV++IV+YVDD+LV + + D E+ + L P K++GE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P P+ E EE + P RE +G++M +T +RP++SFA +A+ P HW A QK L YL TRDLGITY G + + R + G A+ G G + +V S+ + AG K F P +IK+ EDN+GAI + +N +S RT+H+D+
Sbjct: 1320 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILV-AGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR--EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSS-------TEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDV 1738
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 193 bits (491), Expect = 1.550e-50 Identity = 144/448 (32.14%), Postives = 218/448 (48.66%), Query Frame = 1
Query: 1 GVWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVEL--SEAYRDFRKQVGQLKEAMYGL---------------------RFQANPCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVT--KTSIMP----KVLSKSDSPQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEP-------GGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPIDVAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
G W++V R V+ ++ V + K G I KYK RLVA+GF QV G+ Y ++ ++IR +L++ A GW A D + AYL +DE++Y+E A+ D + V +L++A+YGL R +A+ VF + G ++V+ V+VDD L+ +++R + + + I D+G S+ LG I+ D AGTL QH YI+ + RF T K MP ++LSK+ P++ AEV MR++PYRE +G LM AA TRP+I+FA LA+F NPG HW A ++ +YL TR L + YGG+ D HRR + G+ L G G W L + + A K + G P+ A + DN+ AI + K+ RT+H+D+
Sbjct: 828 GTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYKH-EGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQRELEGYVNADGATQEHRRAIT---GYVFLVDG--GAVSWASKKQELVTLS-----TAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDV 1264
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A2N9GQF3_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GQF3_FAGSY) HSP 1 Score: 190 bits (482), Expect = 1.940e-49 Identity = 143/459 (31.15%), Postives = 218/459 (47.49%), Query Frame = 1
Query: 1 GVWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAYR--DFRKQVGQLKEAMYGLR------------------FQAN---PCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDS------PQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYG--------GEPGGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVH----------DPPIDVAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
GVW +VE G +G + VFK K G I++YK RLVA+GF Q +GI Y E+ L + ++R +L+++A +Q+DV A+L D++EE+Y++ E + D + V +LK+++YGL+ F N C+++++ G+ + +V+YVDD+L+ + K + + L +KDMGEASY +G I RDR G L Q YI V +RF + S + K D P+ E E+M+ IPY VG+LM A TRP+I+FA L ++ +PG HWRAA+K ++YL T+D + Y G D C+ R+ G+ L G WR LT+ + F T GV I ++I DN A+ MAKN + R++H+DI
Sbjct: 540 GVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSLLSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQLEGFSSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKVLKRFRMNDCSPSVAPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVYTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTDNLEVIGYSDSDFAGCIDSRKS--TSGYIFLMAS--GAVSWRSAKQTLTATSTMEAEFVSC-------------FEATSHGVWLKSFISRLRIMDSISRPLRIYCDNSAAVFMAKNNKSGSRSKHIDI 980
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A438FE96_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FE96_VITVI) HSP 1 Score: 190 bits (482), Expect = 2.260e-49 Identity = 144/448 (32.14%), Postives = 219/448 (48.88%), Query Frame = 1
Query: 4 VWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAY--RDFRKQVGQLKEAMYGLR------------------FQAN---PCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDS------PQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYG--------GEPGGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPIDVAIKINEDNEGAIKMAKNRFTSRRTRHVDI 1236
VW +VE G +G + VFK K G IK+YK RLVA+GF Q +GI Y E+ + ++R +L+++A +Q+DV A+L +++EE+Y++ E + D + V +LK+++YGL+ F N C++ ++ G+ + +V+YVDD+L+ + K + + L +KDMGEASY +G I RDR G L Q YI V ERF + S + K D P+ E E+M+ IPY VG+LM A TRP+I+FA L ++ NPG HW+AA+K ++YL T+D + Y G D C+ R+ G+ + VG G WR +T+ I A G + +G V D I + I DN A+ MAKN + R++H+DI
Sbjct: 672 VWDLVELPNGAKTIGCKWVFKTKKDSLGNIKRYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFSFVENVMDQCIYLKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSRKS--TSGYIFILVG--GAISWRSIKQTMTATSTMEAEFISC--FEATSHGVWLKSFISGLRVMDS-ISRPLSIYCDNSAAVFMAKNNKSGSRSKHIDI 1111
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Match: A0A2N9EM55_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EM55_FAGSY) HSP 1 Score: 189 bits (481), Expect = 3.140e-49 Identity = 142/459 (30.94%), Postives = 217/459 (47.28%), Query Frame = 1
Query: 1 GVWQMVERQKGKTVLGTRVVFKRKIGKDGRIKKYKCRLVAQGFRQVKGIHYEESPFLTPAQANIRKVLSMIAALGW*ARQLDVDMAYLEVDVDEEIYVELSEAY--RDFRKQVGQLKEAMYGLR------------------FQAN---PCVFRRILHGAVVVVIVVYVDDLLVLSATKRDEEQAVRDLCSCLPIKDMGEASYYLGCHITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIMPKVLSKSDS------PQTYAEVEEMRQIPYREIVGTLM*AATVTRPNISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYG--------GEPGGDQLICMHRRRLRHLPGHASLSVGRGGDDGWRGH*LVLTSAKGNGGGVIQIGIRRAG*DGKRVAFPTTGQGVHDPPIDVAIKINE----------DNEGAIKMAKNRFTSRRTRHVDI 1236
GVW +VE G +G + VFK K G I++YK RLVA+GF Q +GI Y E+ + ++R +L+++A +Q+DV A+L D++EE+Y++ E + D + V +LK+++YGL+ F N C+++++ G+ + +V+YVDD+L+ + K + + L +KDMGEASY +G I RDR G L Q YI V ERF + S + K D P+ E E+M+ IPY VG+LM A TRP+I+FA L ++ +PG HWRAA+K ++YL T+D + Y G D C+ R+ G+ L G WR LT+ + F T GV ++I + DN A+ MAKN + R++H+DI
Sbjct: 716 GVWDLVELPNGVKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRVILALVAHFDLELQQMDVKTAFLNGDLEEEVYMKQPEGFLSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNVISSFGFVENIMDQCIYQKV-SGSKICFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGILGLSQETYINKVLERFRMNDCSPSVAPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTDNLEVIGYSDSDFAGCIDSRKS--TSGYIFLMAS--GAVSWRSAKQTLTATSTMEAEFVSC-------------FEATSHGVWLKSFISGLRIMDSISRPLRMYCDNSAAVFMAKNNKSGSRSKHIDI 1156 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147075.3192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147075.3192.1 >prot_H-elongata_contig147075.3192.1 ID=prot_H-elongata_contig147075.3192.1|Name=mRNA_H-elongata_contig147075.3192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp MAYLEVDVDEEIYVELSEAYRDFRKQVGQLKEAMYGLRFQANPCVFRRILback to top mRNA from alignment at H-elongata_contig147075:2..1313- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147075.3192.1 ID=mRNA_H-elongata_contig147075.3192.1|Name=mRNA_H-elongata_contig147075.3192.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-elongata_contig147075:2..1313- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147075:2..1313- >mRNA_H-elongata_contig147075.3192.1 ID=mRNA_H-elongata_contig147075.3192.1|Name=mRNA_H-elongata_contig147075.3192.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig147075:2..1313- (Himanthalia elongata Himel1 dioecious)back to top |