prot_H-elongata_contig1468.3176.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1468.3176.1
Unique Nameprot_H-elongata_contig1468.3176.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length721
Homology
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: D7FHQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ3_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.740e-40
Identity = 69/80 (86.25%), Postives = 77/80 (96.25%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCP 621
            KQIL+RY+ HL PKASREVWSHDEEEVLWRAQ+EYGNAW+YIS LLPGRSENAVKNHWYTQMRMF+GQRG+NP++SKPCP
Sbjct:   47 KQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWSYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCP 126
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A6H5L686_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L686_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.810e-37
Identity = 71/82 (86.59%), Postives = 78/82 (95.12%), Query Frame = 0 
Query:  540 EDKQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCP 621
            E KQIL+RY+ HL PKASREVWSHDEEEVLWRAQ+EYGNAWNYIS LLPGRSENAVKNHWYTQMRMF+GQRG+NP++SKPCP
Sbjct:  601 EGKQILQRYLTHLYPKASREVWSHDEEEVLWRAQKEYGNAWNYISSLLPGRSENAVKNHWYTQMRMFIGQRGNNPSSSKPCP 682
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: F0XZ12_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ12_AURAN)

HSP 1 Score: 76.6 bits (187), Expect = 4.120e-13
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMR 604
            KQ   R++ HL+P   RE WS  EE V++ AQ+  GN W  I+ LLPGR++NA+KNHWY+ MR
Sbjct:   56 KQCRTRWLNHLDPGIKREPWSEHEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMR 118
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.910e-13
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQR 610
            KQ   R++ HL+P   R+ W+ +EE+V++ AQR  GN W  I+ LL GR++NA+KNHWY+ MR  + +R
Sbjct:   44 KQCRTRWLNHLDPSLRRDPWTDEEEQVIYNAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNMRRR 112
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN)

HSP 1 Score: 76.6 bits (187), Expect = 5.840e-13
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMR 604
            KQ   R++ HL+P   RE WS  EE V++ AQ   GN W  I+ LLPGR++NA+KNHWY+ MR
Sbjct:   67 KQCRTRWLNHLDPAIKREPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMR 129
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A8B7AXD3_ORYAF (transcriptional activator Myb isoform X7 n=1 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B7AXD3_ORYAF)

HSP 1 Score: 82.4 bits (202), Expect = 1.230e-12
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCPPTTTAEGVRLASEKEGYQLG 641
            KQ  ER+  HLNP+  +  W+ +E+ ++++A +  GN W  I+ LLPGR++NA+KNHW + MR  + Q G    +SK  PPT     V  + +K G+ +G
Sbjct:  108 KQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASPPT-----VATSFQKNGHLIG 202
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A8B7B0R9_ORYAF (transcriptional activator Myb isoform X6 n=1 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B7B0R9_ORYAF)

HSP 1 Score: 82.4 bits (202), Expect = 1.230e-12
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCPPTTTAEGVRLASEKEGYQLG 641
            KQ  ER+  HLNP+  +  W+ +E+ ++++A +  GN W  I+ LLPGR++NA+KNHW + MR  + Q G    +SK  PPT     V  + +K G+ +G
Sbjct:  108 KQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASPPT-----VATSFQKNGHLIG 202
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A8B7B0R4_ORYAF (transcriptional activator Myb isoform X1 n=4 Tax=Eutheria TaxID=9347 RepID=A0A8B7B0R4_ORYAF)

HSP 1 Score: 82.4 bits (202), Expect = 1.580e-12
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCPPTTTAEGVRLASEKEGYQLG 641
            KQ  ER+  HLNP+  +  W+ +E+ ++++A +  GN W  I+ LLPGR++NA+KNHW + MR  + Q G    +SK  PPT     V  + +K G+ +G
Sbjct:  108 KQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASPPT-----VATSFQKNGHLIG 202
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: MYB_AVIMB (Transforming protein Myb n=3 Tax=root TaxID=1 RepID=MYB_AVIMB)

HSP 1 Score: 80.5 bits (197), Expect = 2.000e-12
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCPPTTT 625
            KQ  ER+  HLNP+  +  W+ +E+ ++++A +  GN W  I+ LLPGR++NAVKNHW + MR  + Q G    +SK  PP+ T
Sbjct:   57 KQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQEGYPQESSKAGPPSAT 140
[Close]
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Match: A0A452Q9J7_URSAM (MYB proto-oncogene, transcription factor n=2 Tax=Ursus TaxID=9639 RepID=A0A452Q9J7_URSAM)

HSP 1 Score: 80.1 bits (196), Expect = 2.280e-12
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0 
Query:  542 KQILERYIAHLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWYTQMRMFLGQRGSNPTNSKPCPPT 623
            KQ  ER+  HLNP+  +  W+ +E+ ++++A +  GN W  I+ LLPGR++NA+KNHW + MR  + Q G    +SK  PPT
Sbjct:  128 KQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASPPT 209
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1468.3176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHQ3_ECTSI3.740e-4086.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L686_9PHAE1.810e-3786.59MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
F0XZ12_AURAN4.120e-1352.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A835ZPI2_9STRA4.910e-1346.38Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
F0Y4P7_AURAN5.840e-1352.38Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8B7AXD3_ORYAF1.230e-1239.00transcriptional activator Myb isoform X7 n=1 Tax=O... [more]
A0A8B7B0R9_ORYAF1.230e-1239.00transcriptional activator Myb isoform X6 n=1 Tax=O... [more]
A0A8B7B0R4_ORYAF1.580e-1239.00transcriptional activator Myb isoform X1 n=4 Tax=E... [more]
MYB_AVIMB2.000e-1242.86Transforming protein Myb n=3 Tax=root TaxID=1 RepI... [more]
A0A452Q9J7_URSAM2.280e-1242.68MYB proto-oncogene, transcription factor n=2 Tax=U... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 557..605
e-value: 1.2E-8
score: 44.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 558..601
e-value: 8.8E-10
score: 38.6
NoneNo IPR availableGENE3D1.10.10.60coord: 560..625
e-value: 1.3E-12
score: 49.6
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 541..649
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 541..649
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 553..607
score: 16.149
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 541..610

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1468contigH-elongata_contig1468:7228..11892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1468.3176.1mRNA_H-elongata_contig1468.3176.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1468 6943..13374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1468.3176.1 ID=prot_H-elongata_contig1468.3176.1|Name=mRNA_H-elongata_contig1468.3176.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=721bp
MLPVFGSSERGLIDRFQHPSASPEKQYGAQRHRHMAVFGEARAPQQFQPG
LEKLGRHGSRMHPDTSERSTRNLPRRRIAAQDSNDDDGETSSASEDSGFS
GGYPSPSRSKARIPCAKRPEPSIGLGSEFSKRSRLLSDPQYKWSPDSDSC
SATGNYRTSGNIVARQLPRMAALESYHHQQQRSLEYPKHQIQPKQPSLPS
RDQPHPRQHHHQQAPPPPQFHPSQEPRHLPAVGSHGPTSGMMGTAPMQLP
PLAMVRAPVPPVAPPLTSFVPAVRVMSPSTPGARPAAPVHAPSTSNHLHD
QHNRQSHHCPQGSYLEAETAMPRQSTSINKTTARSSSSNNNGSECSGGAL
LRPWLSREEGDRLPQVSRIESFRGDRRPLSSARPGWAPVWSTPAQDHSEP
YDHRPAYESGFSGDGVITSKSSGYVSRDSVAGDWSFDPGSYHPRTLQGRE
KSRHLVGPAQQHAKVLQRHDAIGSRTPSPAFRQQEALVHQQHQQQQDTNY
FPPRVTLAPPLADRARKGGWKCAAASDKRAFGREDSNTEEDKQILERYIA
HLNPKASREVWSHDEEEVLWRAQREYGNAWNYISGLLPGRSENAVKNHWY
TQMRMFLGQRGSNPTNSKPCPPTTTAEGVRLASEKEGYQLGEQRKLEEDH
RADAQREAAEVDKDHQAPPDVHALAENAARAEAVAALGMLFSAPSCGEGD
DSASNPDRERVSSQRKGSCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf