prot_H-elongata_contig146745.3174.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146745.3174.1
Unique Nameprot_H-elongata_contig146745.3174.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0K072_9PHAE (Acetohydroxy-acid synthase small subunit n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K072_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 1.260e-121
Identity = 185/194 (95.36%), Postives = 192/194 (98.97%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGY+RITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEIT+DPGKI+ALQKVLEKYKILELIRTGEIGLLRESN+ST+SLREYPH EDN SQFNQ+NIK+LFPQEY
Sbjct:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYNRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITADPGKIIALQKVLEKYKILELIRTGEIGLLRESNVSTSSLREYPHAEDNFSQFNQDNIKDLFPQEY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0F6Q2_AKKLU (Acetolactate synthase small subunit n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q2_AKKLU)

HSP 1 Score: 258 bits (660), Expect = 3.410e-85
Identity = 135/192 (70.31%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDN--LSQFNQENIKNLF 190
            MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER  Y+RITI+VINQ DG D+A QLT+Q+RKL+NVVNVKDITYLP VQREL+LIKL+V+  ER EILNL Q+FRFKI+D+TD TLI+EIT+DPGKI+AL KVLEKY IL+L RTGEI L RES+++T+SLREYP  E N  + +   +NI++LF
Sbjct:    1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIIVINQSDGSDAASQLTKQIRKLVNVVNVKDITYLPLVQRELLLIKLQVDLMERTEILNLAQVFRFKIIDMTDSTLIIEITADPGKIVALHKVLEKYTILQLSRTGEIALTRESSVNTSSLREYPEFEVNTVIGKNYNKNIEDLF 192          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A0S0G9Z6_COSCS (Acetolactate synthase small subunit n=19 Tax=Laminariales TaxID=2886 RepID=A0A0S0G9Z6_COSCS)

HSP 1 Score: 258 bits (659), Expect = 5.550e-85
Identity = 134/194 (69.07%), Postives = 168/194 (86.60%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER  Y+RITIVVINQ DG D+A QLT+QL+KLINVVNV+DITYLP VQRELILIKL+V+  ER EI+NL ++FRFKI D+T+ TLILEIT+DPGKI+ALQK+L+KY IL+L RTGEI L RES+++T+SL+EYP  E + S+ + +NI+ LF ++Y
Sbjct:    1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQLKKLINVVNVQDITYLPLVQRELILIKLQVSVIEREEIINLAEVFRFKITDITESTLILEITADPGKIVALQKILKKYNILQLSRTGEIALTRESSVNTSSLKEYPEFETDTSRNSFKNIEELFYKDY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0F7F2_9PHAE (Acetolactate synthase small subunit n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7F2_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 2.250e-84
Identity = 134/194 (69.07%), Postives = 165/194 (85.05%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            MKRT+SV+ EKDAGGL RIISL+TRRRFQIESIT+ ACER  Y+RITIVVINQ DG D+A QLT+Q++KL+NVVNV+DITYLP VQRELILIKL+V+  ER EILNL Q+FRFKI D+T+ TLILE+T+DPGKI+ALQK+LEKY IL+L RTGEI L RES++ST+SL+EYP  E +  +   +NI+ LF ++Y
Sbjct:    1 MKRTISVLVEKDAGGLARIISLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQVKKLLNVVNVQDITYLPLVQRELILIKLQVSVTEREEILNLAQVFRFKITDITESTLILELTADPGKIVALQKILEKYNILQLSRTGEIALTRESSVSTSSLKEYPEFEADTGRNYFKNIEELFYKDY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: D1J7C0_ECTSI (Acetolactate synthase small subunit n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7C0_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.510e-83
Identity = 133/194 (68.56%), Postives = 161/194 (82.99%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            M+RT+SV+ EKD GGLVRIISL+TRRRF I+SIT+  CER GY+RI IVVINQ DG D+ KQLT+Q+RKLINVVNV+DITYLP ++REL+LIKL+VN  ER EILNL QIFRFKI DVTD TLILE+T+DPGKI AL+KVLEKY IL+L+RTG I L+RES +ST+SL+EYP  E    Q    NI++LF ++Y
Sbjct:    1 MERTISVLVEKDPGGLVRIISLLTRRRFHIKSITLSPCERKGYERIIIVVINQSDGVDAGKQLTKQIRKLINVVNVQDITYLPLIERELVLIKLKVNLIERTEILNLAQIFRFKITDVTDSTLILEVTADPGKIAALEKVLEKYNILQLVRTGRIALIRESRVSTSSLKEYPEFEVLTGQNYLNNIEDLFKKDY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A0R6LUP2_UNDPI (Acetolactate synthase small subunit n=5 Tax=Alariaceae TaxID=2887 RepID=A0A0R6LUP2_UNDPI)

HSP 1 Score: 253 bits (645), Expect = 7.480e-83
Identity = 129/194 (66.49%), Postives = 166/194 (85.57%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            MKRT+SV+ EKDAGGLVRIISL+TRRRFQIESIT+ +CER  Y+RITIVVINQ DG D+A QLT+Q++KL+NVVNV+DITYLP VQREL+LIKL+++  ER EILNL ++FRFKI D+T+ TLILE+T+DPGKI+ALQK+LEKY IL+L RTGEI + RES++ST+SL+EYP  + +  +   +NI+ LF ++Y
Sbjct:    1 MKRTISVLVEKDAGGLVRIISLLTRRRFQIESITMASCERKCYERITIVVINQSDGSDAASQLTKQIKKLLNVVNVQDITYLPLVQRELVLIKLQISVTEREEILNLAKVFRFKITDITESTLILELTADPGKIVALQKILEKYNILQLSRTGEIAVTRESSVSTSSLKEYPEFDADTGRNYFKNIEELFYKDY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A8F0JXD3_9PHAE (Acetolactate synthase small subunit n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JXD3_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.320e-82
Identity = 132/193 (68.39%), Postives = 166/193 (86.01%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLS---QFNQENIKNLF 190
            MKRT+SV+ EKDAGGLVRIISL+TRRRFQIESIT+ ACER  Y+RITI++INQ DG D+A QLT+Q+RKL+NVVNVKDIT LP VQREL+LIKL+VN  ER EILNL Q+FRFK++D+TD TLILEIT+DPGKI+AL +VL+KY IL+L RTGEI L RES+++T+SL+EYP  ++N+     +N+ NI++LF
Sbjct:    1 MKRTISVLVEKDAGGLVRIISLLTRRRFQIESITMAACERKCYERITIIIINQSDGSDAASQLTKQMRKLVNVVNVKDITCLPLVQRELLLIKLQVNLIERTEILNLAQVFRFKVIDMTDSTLILEITADPGKIVALYQVLDKYNILQLSRTGEIALTRESSVNTSSLKEYPGFDNNVGVGKNYNK-NIEDLF 192          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A516IDP2_9PHAE (Acetolactate synthase small subunit n=2 Tax=Lessonia TaxID=105411 RepID=A0A516IDP2_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 5.720e-82
Identity = 131/190 (68.95%), Postives = 159/190 (83.68%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLF 190
            MKRT+SV+ EKDAGGLVRI+SL+TRRRFQIESIT+ ACER  Y+RITIVVINQ DG D+A QLT+Q++KLINVVNV+DITYLP VQREL+LIKL+VN  ER EIL L  IFRFKI D+T+ TLI+E+T+DPGKI+ALQK+LEKY IL+L RTGEI L RES++ST+SL+EYP  E    +    N++ LF
Sbjct:    1 MKRTISVLVEKDAGGLVRIVSLLTRRRFQIESITMAACERKCYERITIVVINQSDGSDAASQLTKQIKKLINVVNVQDITYLPLVQRELVLIKLQVNIIEREEILRLADIFRFKINDITESTLIIEVTADPGKIVALQKILEKYNILQLSRTGEIALTRESSVSTSSLKEYPEFEAGTGRNYFINVEELF 190          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A344PFD2_9PHAE (Acetolactate synthase small subunit n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFD2_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 3.340e-80
Identity = 127/194 (65.46%), Postives = 159/194 (81.96%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            M+RT+SV+ EKD GGLVRIISL+TRRRF ++SIT+  CER  Y+RITIV+INQ DG D+ KQLT+Q+RKLINVVNVKDITYLP VQREL+L+KL+VN +ERAEI  L QIFRFKI D+TD T+ILE+T+D GKI AL+K+LEKY IL+L RTG I L+RES +ST SL+EYP  +    Q   +NI++LF ++Y
Sbjct:    1 MERTISVLVEKDTGGLVRIISLLTRRRFHLKSITMSTCERKCYERITIVLINQSDGVDAGKQLTKQIRKLINVVNVKDITYLPLVQRELVLVKLQVNLKERAEISTLAQIFRFKITDMTDSTIILEVTADQGKIAALEKILEKYNILQLSRTGGIALIRESGVSTLSLKEYPEFDPRTGQNYLKNIEDLFQKDY 194          
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Match: A0A1I9LVF0_9PHAE (Acetolactate synthase small subunit n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVF0_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.930e-79
Identity = 127/194 (65.46%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVVINQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQERAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELIRTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY 194
            M+RT+SV+ EKD GGL RIIS++TRRRF ++SIT+ +CER GY+R+TIV+INQ DG DS  QLT+Q+RKLINVVNVKDITYLP V+REL+LIKL+V+  ERAEI NL QIFRFKI D+TD T+ILE+T+D GKI ALQK+LEKY ILEL R+G I L+RES +ST+SL+EYP  E    Q    NI++LF + Y
Sbjct:    1 MERTISVLIEKDTGGLARIISILTRRRFHLKSITMSSCERKGYERLTIVLINQSDGVDSGMQLTKQIRKLINVVNVKDITYLPLVERELVLIKLQVSLIERAEISNLAQIFRFKITDITDSTIILEVTADQGKIAALQKILEKYNILELSRSGRIALIRESGVSTSSLKEYPEFELLTGQNYLNNIEDLFKKNY 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146745.3174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0K072_9PHAE1.260e-12195.36Acetohydroxy-acid synthase small subunit n=1 Tax=D... [more]
A0A8F0F6Q2_AKKLU3.410e-8570.31Acetolactate synthase small subunit n=1 Tax=Akkesi... [more]
A0A0S0G9Z6_COSCS5.550e-8569.07Acetolactate synthase small subunit n=19 Tax=Lamin... [more]
A0A8F0F7F2_9PHAE2.250e-8469.07Acetolactate synthase small subunit n=3 Tax=Lamina... [more]
D1J7C0_ECTSI1.510e-8368.56Acetolactate synthase small subunit n=2 Tax=Ectoca... [more]
A0A0R6LUP2_UNDPI7.480e-8366.49Acetolactate synthase small subunit n=5 Tax=Alaria... [more]
A0A8F0JXD3_9PHAE1.320e-8268.39Acetolactate synthase small subunit n=1 Tax=Pseudo... [more]
A0A516IDP2_9PHAE5.720e-8268.95Acetolactate synthase small subunit n=2 Tax=Lesson... [more]
A0A344PFD2_9PHAE3.340e-8065.46Acetolactate synthase small subunit n=4 Tax=Scytos... [more]
A0A1I9LVF0_9PHAE1.930e-7965.46Acetolactate synthase small subunit n=2 Tax=Pleuro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 1..81
e-value: 1.9E-23
score: 84.1
NoneNo IPR availablePFAMPF13710ACT_5coord: 12..76
e-value: 3.6E-14
score: 52.3
NoneNo IPR availablePANTHERPTHR30239:SF14coord: 1..171
NoneNo IPR availablePRODOMPD002844coord: 1..79
e-value: 6.0E-14
score: 186.0
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 83..162
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 2..79
IPR027271Acetolactate synthase/Transcription factor NikR, C-terminalGENE3D3.30.70.1150coord: 86..166
e-value: 1.3E-24
score: 87.6
IPR019455Acetolactate synthase, small subunit, C-terminalPFAMPF10369ALS_ss_Ccoord: 87..159
e-value: 2.5E-23
score: 82.1
IPR004789Acetolactate synthase, small subunitTIGRFAMTIGR00119TIGR00119coord: 1..160
e-value: 1.8E-42
score: 142.9
IPR004789Acetolactate synthase, small subunitPANTHERPTHR30239ACETOLACTATE SYNTHASE III, REGULATORY SUBUNITcoord: 1..171
IPR002912ACT domainPROSITEPS51671ACTcoord: 4..81
score: 10.623

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146745contigH-elongata_contig146745:1005..1586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146745.3174.1mRNA_H-elongata_contig146745.3174.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146745 1005..1586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146745.3174.1 ID=prot_H-elongata_contig146745.3174.1|Name=mRNA_H-elongata_contig146745.3174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
MKRTLSVITEKDAGGLVRIISLITRRRFQIESITVGACERNGYDRITIVV
INQRDGGDSAKQLTRQLRKLINVVNVKDITYLPTVQRELILIKLEVNFQE
RAEILNLVQIFRFKIVDVTDYTLILEITSDPGKIMALQKVLEKYKILELI
RTGEIGLLRESNISTASLREYPHPEDNLSQFNQENIKNLFPQEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027271Acetolactate_synth/TF_NikR_C
IPR019455Acetolactate_synth_ssu_C
IPR004789Acetalactate_synth_ssu
IPR002912ACT_dom