prot_H-elongata_contig146662.3170.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig146662.3170.1
Unique Nameprot_H-elongata_contig146662.3170.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S3XQV4_HETAK (Glutamate--cysteine ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQV4_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 3.340e-19
Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VFVVLVTRVILAFDLNLY+PLSKVDEN+ RAH R AV GE+
Sbjct:   94 MEVQLTDFENAAFTVFVVLVTRVILAFDLNLYLPLSKVDENMRRAHARGAVTGER 148          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S4D5D2_HETAK (Glutamate--cysteine ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5D2_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 4.050e-18
Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VFVVLVTRVILAFDLNLY+PLSKVDEN+ RAH R AV GE+
Sbjct:  239 MEVQLTDFENAAFTVFVVLVTRVILAFDLNLYLPLSKVDENMRRAHARGAVTGER 293          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S2SFH2_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFH2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.280e-17
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VF+VLVTRVILAFDLNLYIPLSKVDEN++RAH R+AV  EK
Sbjct:  141 MEVQLTDFENAAFAVFIVLVTRVILAFDLNLYIPLSKVDENMERAHRRDAVLNEK 195          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S2SFD3_9STRA (Glutamate--cysteine ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFD3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.540e-17
Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VF+VLVTRVILAFDLNLYIPLSKVDEN++RAH R+AV  EK
Sbjct:  468 MEVQLTDFENAAFAVFIVLVTRVILAFDLNLYIPLSKVDENMERAHRRDAVLNEK 522          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S2V1Z5_9STRA (Glutamate--cysteine ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.640e-16
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAFV FVVL+ RVILAFDLNLYIPLSKVDEN+ RAH R+AV  +K
Sbjct:   84 MEVQMTDFENAAFVTFVVLLNRVILAFDLNLYIPLSKVDENMKRAHARDAVLNQK 138          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S0L9D2_9EUKA (Glutamate--cysteine ligase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9D2_9EUKA)

HSP 1 Score: 80.1 bits (196), Expect = 1.710e-16
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNA 50
            ME+Q +D ENAAF VFVVLV+RVILAFDLNLYIPLSKVDEN+ RAH RNA
Sbjct:   47 MEVQLTDFENAAFTVFVVLVSRVILAFDLNLYIPLSKVDENMRRAHARNA 96          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S0IWB9_9EUKA (Glutamate--cysteine ligase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IWB9_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 2.550e-16
Identity = 42/55 (76.36%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VFVVLV+RVILAFDLNLYIPLSKVDEN+ RAH RNA    K
Sbjct:  499 MEVQLTDFENAAFTVFVVLVSRVILAFDLNLYIPLSKVDENMQRAHARNAAAEGK 553          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A7S4B9H5_CHRCT (Glutamate--cysteine ligase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9H5_CHRCT)

HSP 1 Score: 80.1 bits (196), Expect = 6.510e-16
Identity = 42/55 (76.36%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VFVVLV+RVILAFDLNLYIPLSKVDEN+ RAH RNA    K
Sbjct:  552 MEVQFTDFENAAFTVFVVLVSRVILAFDLNLYIPLSKVDENMRRAHARNAAAEGK 606          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: A0A369GFQ8_9HYPO (Glutamate--cysteine ligase n=3 Tax=Ophiocordyceps TaxID=474995 RepID=A0A369GFQ8_9HYPO)

HSP 1 Score: 79.7 bits (195), Expect = 8.860e-16
Identity = 38/55 (69.09%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF VF+VLVTR IL+FDLNLYIP++KVDEN++RAH R+AV G++
Sbjct:  450 MEIQMTDFENAAFSVFMVLVTRAILSFDLNLYIPIAKVDENMERAHARDAVLGQR 504          
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Match: U4KZU1_PYROM (Glutamate--cysteine ligase n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4KZU1_PYROM)

HSP 1 Score: 79.3 bits (194), Expect = 1.210e-15
Identity = 37/55 (67.27%), Postives = 48/55 (87.27%), Query Frame = 0
Query:    1 MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNAVRGEK 55
            ME+Q +D ENAAF +F VL+TRVIL++DLNLYIP+SKVD+N+ RAH+RNAV  +K
Sbjct:  475 MEIQLTDFENAAFAIFTVLLTRVILSYDLNLYIPISKVDDNMTRAHIRNAVLDQK 529          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146662.3170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XQV4_HETAK3.340e-1978.18Glutamate--cysteine ligase (Fragment) n=1 Tax=Hete... [more]
A0A7S4D5D2_HETAK4.050e-1878.18Glutamate--cysteine ligase (Fragment) n=1 Tax=Hete... [more]
A0A7S2SFH2_9STRA1.280e-1778.18Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A7S2SFD3_9STRA1.540e-1778.18Glutamate--cysteine ligase n=1 Tax=Rhizochromulina... [more]
A0A7S2V1Z5_9STRA1.640e-1674.55Glutamate--cysteine ligase n=1 Tax=Fibrocapsa japo... [more]
A0A7S0L9D2_9EUKA1.710e-1682.00Glutamate--cysteine ligase n=1 Tax=Coccolithus bra... [more]
A0A7S0IWB9_9EUKA2.550e-1676.36Glutamate--cysteine ligase n=1 Tax=Calcidiscus lep... [more]
A0A7S4B9H5_CHRCT6.510e-1676.36Glutamate--cysteine ligase n=1 Tax=Chrysotila cart... [more]
A0A369GFQ8_9HYPO8.860e-1669.09Glutamate--cysteine ligase n=3 Tax=Ophiocordyceps ... [more]
U4KZU1_PYROM1.210e-1567.27Glutamate--cysteine ligase n=1 Tax=Pyronema omphal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.590.50coord: 1..48
e-value: 9.1E-16
score: 59.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR004308Glutamate-cysteine ligase catalytic subunitPFAMPF03074GCScoord: 1..55
e-value: 6.1E-20
score: 71.9
IPR004308Glutamate-cysteine ligase catalytic subunitPANTHERPTHR11164GLUTAMATE CYSTEINE LIGASEcoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig146662contigH-elongata_contig146662:874..1086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig146662.3170.1mRNA_H-elongata_contig146662.3170.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig146662 285..1349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig146662.3170.1 ID=prot_H-elongata_contig146662.3170.1|Name=mRNA_H-elongata_contig146662.3170.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MEMQASDAENAAFVVFVVLVTRVILAFDLNLYIPLSKVDENLDRAHVRNA
VRGEKVTRCYPIYHYTAYES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004308GCS