prot_H-elongata_contig146544.3165.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 8.130e-17 Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0
Query: 48 VWIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHSRTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILNRTGAHLLGGLLVFPRSHTGSSLRATRLRP 166
V++GD+GA H+ S + + P P+ ++LGDG V F G +D+IFH D VTL +V VPGL ++ +++Q++HE+ LNR A +LGG + + G+ ++ TR+ P
Sbjct: 712 VFLGDTGAVVHVVPSGEKV---RLPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILPLNMIQDRHEIKLNRDRASILGGRVRMTKFPHGNYIQGTRVDP 827
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5JWT3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT3_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 2.290e-13 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 0
Query: 49 WIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHS------RTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILNRT----GAHLLGGLLVFPRSHTGSSLRAT 162
W DSGA++ +T + MY+ + P I +GD ++ KV+ +G +DL FH + D VT+ +V FVPG GFNLFS V KHEV+ + T HL +L G +L T
Sbjct: 439 WQADSGASAMITNKVDAMYNVRHLGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHEVMDSNTFHNRAGHLSEPILRLSAKQHGITLTGT 562
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5KQJ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ6_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.700e-11 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0
Query: 52 DSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHS------RTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILN 137
DSGA++ ++ + MY+ + P I +GD ++ KV+ +G +DL FH + D VT+ +V FVPG GFNLFS V KHEV +N
Sbjct: 345 DSGASAMISNKVDAMYNVRHLGPDEQFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHEVRIN 436
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5JMH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH6_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.770e-11 Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0
Query: 52 DSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHS------RTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILNRTGAHLLGGLLVFPRSHTG 156
DSGA++ +T + MY+ + P I +GD ++ KV+ +G +DL FH + D VT+ +V FVPG GFNLFS V KH V +N +P H G
Sbjct: 321 DSGASAMITNKVDAMYNVRHLGPDERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVSHKHAVRINPNARD-------YPHGHDG 424
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5KH18_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH18_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 3.760e-10 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 52 DSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHS------RTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILNRTGA 141
DSGA + +T + MY+ + P + +GD + K++ +G +DL FH + D VT+ +V FVPG GFNLFS V KH+V +N A
Sbjct: 303 DSGANAMITNKVDAMYNVRHLGPDERFVQIGDSAPIKIAAVGSLDLGFHQIGADGKQEDLDVTVPEVLFVPGCGFNLFSVWKVFHKHKVRINPNAA 398
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A194RJV9_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A194RJV9_PAPMA) HSP 1 Score: 55.8 bits (133), Expect = 5.370e-6 Identity = 32/102 (31.37%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 47 DVWIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFH-SRTDYPVTLHDVSFVPGLGFNLFSF-HVVQEKHEVILNRTGAHLLGG 146
D W DSGAT HMTR ++ MYD + PP R I++ + V +GK+++ ++ ++ + + +V F+P L NL S + + V TG ++ G
Sbjct: 218 DDWYIDSGATMHMTRRSDWMYDEQSPPIHR--IMVANSEAIPVQSMGKVNIQTKLNKDEHQIQVRNVLFIPKLSTNLLSVSQLTKSGCNVEFTNTGCNIYNG 317
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: UPI001F12C045 (uncharacterized protein LOC124543428 n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F12C045) HSP 1 Score: 55.5 bits (132), Expect = 6.750e-6 Identity = 31/102 (30.39%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 47 DVWIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFH-SRTDYPVTLHDVSFVPGLGFNLFSF-HVVQEKHEVILNRTGAHLLGG 146
D W DSGAT HMTR ++ MYD + PP R ++ + V +GK+++ ++ ++ + + +V F+P L NL S + + +V TG ++ G
Sbjct: 121 DDWYIDSGATMHMTRRSDWMYDEQSPPVHRIKV--ANSEAIPVQSMGKVNIQTKLNKDEHRIQVRNVLFIPKLTTNLLSISQLTKSGCKVEFTNTGCNIYNG 220
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: UPI001C35A33D (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C35A33D) HSP 1 Score: 53.1 bits (126), Expect = 4.140e-5 Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0
Query: 47 DVWIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFH-SRTDYPVTLHDVSFVPGLGFNLFS 124
D W DSGAT H+TR ++ MYD +PPP Q+ I++ + V +GK+++ + + ++ + + +V F+P + NL S
Sbjct: 243 DDWYIDSGATMHITRCSDWMYDLEPPPIQK--IMVANNEALSVHNMGKVNIQTNICKDEHLIQVRNVLFIPEVSANLLS 319
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A6H5JLU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU1_9PHAE) HSP 1 Score: 53.1 bits (126), Expect = 4.630e-5 Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0
Query: 55 ATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHS------RTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVI 135
A++ +T + +Y+ + I +GD ++ KV+ +G +DL FH + D VT+ +V FV G GFNLF V KHE I
Sbjct: 406 ASAMITNKVDALYNLRHLGADERFIQIGDSALIKVAAVGSLDLRFHQIGADGKQEDLDVTVPEVLFVLGCGFNLFLVWKVSHKHERI 492
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Match: A0A2P6S703_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S703_ROSCH) HSP 1 Score: 52.0 bits (123), Expect = 8.320e-5 Identity = 38/132 (28.79%), Postives = 56/132 (42.42%), Query Frame = 0
Query: 12 PPGEFQSSSANVDNLGGSYLPSAFVGQLVGVEQVGDVWIGDSGATSHMTRSANLMYDTKPPPPQRFRIILGDGSIKKVSFIGKIDLIFHSRTDYPVTLHDVSFVPGLGFNLFSFHVVQEKHEVILNRTGAHL 143
PP + SA+ + G S S G+VWIGD+GAT HMT + +P I +G+G + IG L T Y L++V VP L NL SF+ + ++ + H+
Sbjct: 95 PPASLTAMSAHANCNGASSSNSQH-------SNCGEVWIGDTGATHHMTSDLRNLTIAQPYDSNN-SITIGNGQGLSIKHIGAAKLTPGKHTFY---LNNVLHVPSLAVNLLSFNKLCRDNQCFITLDETHI 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146544.3165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig146544.3165.1 ID=prot_H-elongata_contig146544.3165.1|Name=mRNA_H-elongata_contig146544.3165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bpback to top |