prot_H-elongata_contig14607.3143.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14607.3143.1
Unique Nameprot_H-elongata_contig14607.3143.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length372
Homology
BLAST of mRNA_H-elongata_contig14607.3143.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.090e-6
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MINVAKKKCASDGCLKRPSYGVAGSKKAEYCAVHTLEGMV 40
            M++V  K+C   GC KRPSYG  GSKKAE CA H L+GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40          
BLAST of mRNA_H-elongata_contig14607.3143.1 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 5.670e-5
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 MINVAKKKCASDGCLKRPSYGVAGSKKAEYCAVHTLEGMV 40
            M NV  K+C   GC K+PS+G AGSK+AE+C  H  + MV
Sbjct:    1 MFNVVDKRCGHPGCTKKPSFGTAGSKRAEFCCPHAKQDMV 40          
BLAST of mRNA_H-elongata_contig14607.3143.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 5.920e-5
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MINVAKKKCASDGCLKRPSYGVAGSKKAEYCAVHTLEGMV 40
            MI+V  K+C   GC+KRPSYG  GSKK E+CA H+ +GMV
Sbjct:    1 MIDVVCKRCGHLGCMKRPSYGTDGSKKREFCAQHSQQGMV 40          
BLAST of mRNA_H-elongata_contig14607.3143.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 7.320e-5
Identity = 19/34 (55.88%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    7 KKCASDGCLKRPSYGVAGSKKAEYCAVHTLEGMV 40
            ++CA + C+K P+YGV G++KAE+CA H L+GMV
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14607.3143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI1.090e-662.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JW94_9PHAE5.670e-552.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G985_ECTSI5.920e-560.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5LBM3_9PHAE7.320e-555.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14607contigH-elongata_contig14607:5232..6689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14607.3143.1mRNA_H-elongata_contig14607.3143.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14607 5205..6773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14607.3143.1 ID=prot_H-elongata_contig14607.3143.1|Name=mRNA_H-elongata_contig14607.3143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
MINVAKKKCASDGCLKRPSYGVAGSKKAEYCAVHTLEGMVDVVRKKCVGD
GCFKQPKYGVTGSKKAEYCAVHALDGMINVASKKCAGDGCLKQPKYGVTG
SKKGEYFGVHALEGMVDVVNKRCVDYGCLKQPTYGVAGSKKAEYCAVHAL
DGMISVVSKKCAGDGCLKRPRYGVARSNKPEYCAVHALKGMVNVVDKMCY
SDGCWNHPSYGVAGSKKAEYCSAHALEGMPNVASKMRSGKGYLKLPVDGV
SGITKAEFCTVHPLEGMDKAHIACSSVGCIKRASYSVASNKKPEYCALHP
LEGMIDIAIQRFGGDISAVKNQANSRKRMPETAAREISVLERESTTTFKR
PCCNAVSDTERVKIEVPLSLS*
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