prot_H-elongata_contig145956.3138.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig145956.3138.1
Unique Name	prot_H-elongata_contig145956.3138.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	52

Homology

[Close]

BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Match: A0A6H5K1Z1_9PHAE (DHHA2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.270e-12
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0

Query:    1 RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYST 51
            R++AF+ ++G G+ LVGSCCT+VAERML++A  LLS DVA+LLLGV+   T
Sbjct:  278 RNVAFEANDGGGKALVGSCCTIVAERMLDQAPALLSSDVAQLLLGVILVDT 328

[Close]

BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Match: A0A067C251_SAPPC (DHHA2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C251_SAPPC)

HSP 1 Score: 47.4 bits (111), Expect = 9.960e-5
Identity = 28/51 (54.90%), Postives = 31/51 (60.78%), Query Frame = 0

Query:    1 RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYST 51
            RDIAF+  +  GR LVGS CTLVAER L      L P  A LLLGV+   T
Sbjct:  152 RDIAFERTDAGGRALVGSACTLVAERSLS-----LEPLEATLLLGVIALDT 197

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot

BLAST of mRNA_H-elongata_contig145956.3138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K1Z1_9PHAE	6.270e-12	60.78	DHHA2 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A067C251_SAPPC	9.960e-5	54.90	DHHA2 domain-containing protein n=2 Tax=Saprolegni...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1640.10		coord: 4..52 e-value: 3.2E-5 score: 25.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig145956	contig	H-elongata_contig145956:99..254 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig145956.3138.1	mRNA_H-elongata_contig145956.3138.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig145956 99..254 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig145956.3138.1 ID=prot_H-elongata_contig145956.3138.1|Name=mRNA_H-elongata_contig145956.3138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
RDIAFDVHEGVGRPLVGSCCTLVAERMLERASHLLSPDVARLLLGVVKYS
TA