prot_H-elongata_contig14580.3131.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14580.3131.1
Unique Nameprot_H-elongata_contig14580.3131.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: UPI00142559B9 (secreted RxLR effector protein 161-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142559B9)

HSP 1 Score: 68.2 bits (165), Expect = 7.840e-12
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLG--DTTISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGV----PSAIVDFVDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            Y+D D+ + + DRR + G    L    + ISW       V  +TCEAEYI+LC AS EALF +Q +  +      ++  +VDN+SA  +A N  +  RS +ID   HF+R
Sbjct:   58 YSDSDWGI-AQDRRSISGYGFKLNHQSSLISWKSKKQPVVALSTCEAEYIALCLASQEALFLKQLFSDMMCFQTKSVKVYVDNQSAICLAKNNVSNQRSKHIDIKFHFVR 166          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: UPI0010A40C5F (uncharacterized protein LOC114729360 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A40C5F)

HSP 1 Score: 69.3 bits (168), Expect = 1.050e-11
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDTTISWIRSTHKWVTTATCEAEYISLCDASNE-----ALFTRQSYFGVPSAIVDFVDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+A    DR+ + G+ V LGDT ISW     + V+ ++ E+EY +L D + E     +L +    F    A++ + DN SAK +A NP   SRS +ID +LHFIR
Sbjct:  169 FTDADWATDVDDRKSMAGLCVYLGDTLISWASRKQRVVSRSSTESEYRALADGAVELKWIHSLLSELGLFLKEPAMI-WCDNLSAKALAANPIQHSRSKHIDIDLHFIR 276          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A6H5I7H1_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5I7H1_9HYME)

HSP 1 Score: 65.9 bits (159), Expect = 1.060e-10
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDTTISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQ--SYFGVP--SAIVDFVDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            +AD D+    SDRR   G    L +  +SW     K V  ++ E+EYISL DAS EA++  +     G P  +  V + DN+SA  +A NP   +RS +ID   HF+R
Sbjct:   97 FADADWGSDISDRRSYTGYVFSLSNGAVSWCSKKQKSVALSSTESEYISLSDASKEAIYLSRLLKELGFPHLAKTVLYNDNQSAGKLATNPIFHARSKHIDIRAHFVR 204          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A7D9MAQ6_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9MAQ6_PARCT)

HSP 1 Score: 65.1 bits (157), Expect = 1.280e-10
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDT--TISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGVPSAIVDF-----VDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+    +DRR + G    L  T   ISW       V  +TCEAEYI+L +A  EA F RQ    +  +I D      VDN+ A  +A NP +  RS +ID   HFIR
Sbjct:   59 FCDSDWGASVADRRSITGYNFQLSSTGPLISWKSRKQPTVALSTCEAEYIALANAVQEAKFLRQLCIDMKVSISDDNVLIQVDNQGAINLARNPVHHQRSKHIDIKYHFIR 169          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A1X7SEB0_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SEB0_AMPQE)

HSP 1 Score: 65.9 bits (159), Expect = 1.680e-10
Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDTTISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYF------GVPSAIVDFVDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            Y+D D+A    DR    G   LL    ISW+      V+ +T EAEY+SLC A+ EA++ R+         G P+ I +  DN+    IA NP + SR+ +I+   H++R
Sbjct:  154 YSDADWAGDLDDRHSTSGNLFLLAGGAISWLSKKQPTVSLSTAEAEYVSLCSATQEAVWIRRLLHDINCSQGAPTVIKE--DNQGTIAIARNPVSHSRTKHIEIKYHYVR 261          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A2K3L2I6_TRIPR (Uncharacterized protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L2I6_TRIPR)

HSP 1 Score: 63.9 bits (154), Expect = 2.530e-10
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDTTISWIRSTHKWVTTATCEAEYISLCDASNEALFTR----QSYFGVPSAIVDFVDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            Y+D D++    +R+   G    L D  ISW       V  +TCEAEYIS C+A+ + ++ +    +    V   +   VDNKSA  +A NP    RS +I+   HF+R
Sbjct:   34 YSDSDWSGDKXERKSTMGYVFTLFDCPISWSSKKQNVVALSTCEAEYISACNAACQGIWLQPLLQEIKIDVEDGVELMVDNKSAINLAKNPIAHGRSKHIETKFHFLR 141          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A7D9EJG3_PARCT (Poly (Gag pol) of Ty Copia retrotransposon n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EJG3_PARCT)

HSP 1 Score: 65.1 bits (157), Expect = 3.920e-10
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDT--TISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGVPSAIVDF-----VDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+    +DRR + G    L  T   ISW       V  +TCEAEYI+L +A  EA F RQ    +  +I D      VDN+ A  +A NP +  RS +ID   HFIR
Sbjct:  115 FCDSDWGASVADRRSITGYNFQLSSTGPLISWKSRKQPTVALSTCEAEYIALANAVQEAKFLRQLCIDMKVSISDDNVLIQVDNQGAINLARNPVHHQRSKHIDIKYHFIR 225          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A6S7HTI9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HTI9_PARCT)

HSP 1 Score: 65.1 bits (157), Expect = 4.620e-10
Identity = 43/111 (38.74%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDT--TISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGVPSAIVDF-----VDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+    +DRR + G    L  T   ISW       V  +TCEAEYI+L +A  EA F RQ    +  +I D      VDN+ A  +A NP +  RS +ID   HFIR
Sbjct: 1147 FCDSDWGASVADRRSITGYNFQLSSTGPLISWKSRKQPTVALSTCEAEYIALANAVQEAKFLRQLCIDMKVSISDDNVLIQVDNQGAINLARNPVHHQRSKHIDIKYHFIR 1257          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A7D9F1J7_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9F1J7_PARCT)

HSP 1 Score: 64.3 bits (155), Expect = 5.660e-10
Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDT--TISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGVPSAIVDF-----VDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+    +DRR + G    L  T   ISW       +  +TCEAEYI+L +A  EA F RQ    +  +I D      VDN+ A  +A NP +  RS +ID   HFIR
Sbjct:  101 FCDSDWGASVADRRSITGYNFQLSSTGPLISWKSRKQPTIALSTCEAEYIALANAVQEAKFFRQLCIDMKVSISDDNVLIQVDNQGAINLARNPVHHQRSKHIDIKYHFIR 211          
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Match: A0A6S7JFG0_PARCT (Spondin domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JFG0_PARCT)

HSP 1 Score: 63.9 bits (154), Expect = 1.140e-9
Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 YADVDYAVVSSDRRFVPGVAVLLGDT--TISWIRSTHKWVTTATCEAEYISLCDASNEALFTRQSYFGVPSAIVDF-----VDNKSAKGIADNPSNTSRSNYIDANLHFIR 104
            + D D+    +DRR + G    L  T   ISW       V  +TCEAEYI+L +A  EA F +Q    +  +I D      VDN+ A  +A NP +  RS +ID   HFIR
Sbjct:  345 FCDSDWGASVADRRSITGYNFQLSSTGPLISWKSRKQPTVALSTCEAEYIALANAVQEAKFLKQLCIDMKVSISDDNVLIQVDNQGAINLARNPVHHQRSKHIDIKYHFIR 455          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14580.3131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00142559B97.840e-1238.18secreted RxLR effector protein 161-like n=1 Tax=An... [more]
UPI0010A40C5F1.050e-1138.53uncharacterized protein LOC114729360 n=1 Tax=Proso... [more]
A0A6H5I7H1_9HYME1.060e-1037.96Uncharacterized protein n=1 Tax=Trichogramma brass... [more]
A0A7D9MAQ6_PARCT1.280e-1038.74Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A1X7SEB0_AMPQE1.680e-1035.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3L2I6_TRIPR2.530e-1034.26Uncharacterized protein n=1 Tax=Trifolium pratense... [more]
A0A7D9EJG3_PARCT3.920e-1038.74Poly (Gag pol) of Ty Copia retrotransposon n=1 Tax... [more]
A0A6S7HTI9_PARCT4.620e-1038.74Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9F1J7_PARCT5.660e-1037.84Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7JFG0_PARCT1.140e-937.84Spondin domain-containing protein n=1 Tax=Paramuri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..104
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14580contigH-elongata_contig14580:40..370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14580.3131.1mRNA_H-elongata_contig14580.3131.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14580 40..370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14580.3131.1 ID=prot_H-elongata_contig14580.3131.1|Name=mRNA_H-elongata_contig14580.3131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
YADVDYAVVSSDRRFVPGVAVLLGDTTISWIRSTHKWVTTATCEAEYISL
CDASNEALFTRQSYFGVPSAIVDFVDNKSAKGIADNPSNTSRSNYIDANL
HFIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like